RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 CAVIN4Q5BKX8 364 aa14.21□□□□□ -0.14
SEC61A1-203ENST00000464451 C15orf52Q6ZUT6 534 aaKnown RBP14.21□□□□□ -0.14
SEC61A1-203ENST00000464451 FBXL16Q8N461 479 aa14.21□□□□□ -0.14
SEC61A1-203ENST00000464451 SMARCC2Q8TAQ2 1214 aa14.21□□□□□ -0.14
SEC61A1-203ENST00000464451 APPBP2Q92624 585 aa14.21□□□□□ -0.14
SEC61A1-203ENST00000464451 LRRC2Q9BYS8 371 aa14.21□□□□□ -0.14
SEC61A1-203ENST00000464451 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.21□□□□□ -0.148e-7■■□□□ 13.5
SEC61A1-203ENST00000464451 KIF3AQ9Y496 699 aa14.21□□□□□ -0.14
SEC61A1-203ENST00000464451 USP17L3A6NCW0 530 aa14.2□□□□□ -0.14
SEC61A1-203ENST00000464451 USP17L4A6NCW7 530 aa14.2□□□□□ -0.14
SEC61A1-203ENST00000464451 HMGN5P82970 282 aaKnown RBP14.2□□□□□ -0.14
SEC61A1-203ENST00000464451 SCARF1Q14162 830 aa14.2□□□□□ -0.14
SEC61A1-203ENST00000464451 ZSCAN25Q6NSZ9 544 aa14.2□□□□□ -0.14
SEC61A1-203ENST00000464451 USP17L1Q7RTZ2 530 aa14.2□□□□□ -0.14
SEC61A1-203ENST00000464451 TTC6Q86TZ1 520 aa14.2□□□□□ -0.14
SEC61A1-203ENST00000464451 ZSCAN16Q9H4T2 348 aaPredicted RBP14.2□□□□□ -0.14
SEC61A1-203ENST00000464451 H3BQV1 296 aa14.19□□□□□ -0.14
SEC61A1-203ENST00000464451 EPS15P42566 896 aa14.19□□□□□ -0.14
SEC61A1-203ENST00000464451 SCNN1DP51172 638 aa14.19□□□□□ -0.14
SEC61A1-203ENST00000464451 TTF1Q15361 905 aaPredicted RBP14.19□□□□□ -0.14
SEC61A1-203ENST00000464451 IMMTQ16891 758 aaKnown RBP14.19□□□□□ -0.14
SEC61A1-203ENST00000464451 IFFO2Q5TF58 517 aa14.19□□□□□ -0.14
SEC61A1-203ENST00000464451 TTLL5Q6EMB2 1281 aa14.19□□□□□ -0.14
SEC61A1-203ENST00000464451 FBXO33Q7Z6M2 555 aa14.19□□□□□ -0.14
SEC61A1-203ENST00000464451 ZNF274Q96GC6 653 aaPredicted RBP14.19□□□□□ -0.14
SEC61A1-203ENST00000464451 IL1R1P14778 569 aa14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 MSNP26038 577 aaKnown RBP14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 APOBRQ0VD83 1088 aa14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 TPRNQ4KMQ1 711 aa14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 KIF3CO14782 793 aa14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 VIL1P09327 827 aaKnown RBP14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 VEGFAP15692 232 aaPredicted RBP14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 MCAMP43121 646 aa14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 PHKA1P46020 1223 aa14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 CHAF1AQ13111 956 aaPredicted RBP14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 NAA16Q6N069 864 aaPredicted RBP14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 FAM173BQ6P4H8 233 aa14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 NSUN7Q8NE18 718 aaKnown RBP14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 TDRD7Q8NHU6 1098 aaKnown RBP14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 SPATA32Q96LK8 384 aa14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 NOL7Q9UMY1 257 aaKnown RBP14.18□□□□□ -0.14
SEC61A1-203ENST00000464451 GOLGA6L4A6NEF3 574 aa14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 FGAP02671 866 aa14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 LMOD1P29536 600 aaPredicted RBP14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 EVCP57679 992 aa14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 RESTQ13127 1097 aa14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 DACT2Q5SW24 774 aa14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 RSBN1LQ6PCB5 846 aaPredicted RBP14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 LEO1Q8WVC0 666 aaPredicted RBP14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 DDX11Q96FC9 970 aa14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 L3MBTL3Q96JM7 780 aaPredicted RBP14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 PUS7LQ9H0K6 701 aaKnown RBP14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 CCDC39Q9UFE4 941 aa14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 CNOT7Q9UIV1 285 aaKnown RBP14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 HACL1Q9UJ83 578 aa14.17□□□□□ -0.14
SEC61A1-203ENST00000464451 F8W031 263 aaPredicted RBP14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 FOXP2O15409 715 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 UQCRFS1P1P0C7P4 283 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 POTEIP0CG38 1075 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 POTEJP0CG39 1038 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 PDIA3P30101 505 aaKnown RBP14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 EAPPQ56P03 285 aaPredicted RBP14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 RBM26Q5T8P6 1007 aaKnown RBP14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 STRIP1Q5VSL9 837 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 CCDC102BQ68D86 513 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 MICALL2Q8IY33 904 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 FUCA2Q9BTY2 467 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 GPRC5DQ9NZD1 345 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 CFAP45Q9UL16 551 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 WDR90Q96KV7 1748 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 PTPDC1A2A3K4 754 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 GPAA1O43292 621 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 CTDNEP1O95476 244 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 EPHX2P34913 555 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 GIMAP6Q6P9H5 292 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 PI16Q6UXB8 463 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 KIAA0825Q8IV33 1275 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 CERS5Q8N5B7 392 aa14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 TAF1DQ9H5J8 278 aaPredicted RBP14.16□□□□□ -0.14
SEC61A1-203ENST00000464451 IQCA1LA6NCM1 817 aa14.15□□□□□ -0.14
SEC61A1-203ENST00000464451 ARID4AP29374 1257 aaPredicted RBP14.15□□□□□ -0.14
SEC61A1-203ENST00000464451 MCM5P33992 734 aa14.15□□□□□ -0.14
SEC61A1-203ENST00000464451 ADD2P35612 726 aa14.15□□□□□ -0.14
SEC61A1-203ENST00000464451 UBE3CQ15386 1083 aa14.15□□□□□ -0.14
SEC61A1-203ENST00000464451 SAMD7Q7Z3H4 446 aa14.15□□□□□ -0.14
SEC61A1-203ENST00000464451 TFIP11Q9UBB9 837 aaKnown RBP14.15□□□□□ -0.14
SEC61A1-203ENST00000464451 SALL1Q9NSC2 1324 aa14.15□□□□□ -0.14
SEC61A1-203ENST00000464451 ZNF213O14771 459 aa14.14□□□□□ -0.15
SEC61A1-203ENST00000464451 EGFRP00533 1210 aa14.14□□□□□ -0.15
SEC61A1-203ENST00000464451 CCDC192P0DO97 292 aa14.14□□□□□ -0.15
SEC61A1-203ENST00000464451 CCT2P78371 535 aaKnown RBP14.14□□□□□ -0.15
SEC61A1-203ENST00000464451 TBC1D10BQ4KMP7 808 aaPredicted RBP14.14□□□□□ -0.15
SEC61A1-203ENST00000464451 SLC9C2Q5TAH2 1124 aa14.14□□□□□ -0.15
SEC61A1-203ENST00000464451 NCOA7Q8NI08 942 aa14.14□□□□□ -0.15
SEC61A1-203ENST00000464451 NUP62CLQ9H1M0 184 aa14.14□□□□□ -0.15
SEC61A1-203ENST00000464451 WDR19Q8NEZ3 1342 aa14.14□□□□□ -0.15
SEC61A1-203ENST00000464451 LAMA4Q16363 1823 aa14.14□□□□□ -0.15
SEC61A1-203ENST00000464451 HAND2P61296 217 aa14.14□□□□□ -0.15
SEC61A1-203ENST00000464451 GRIK5Q16478 980 aa14.14□□□□□ -0.15
SEC61A1-203ENST00000464451 MFSD14BQ5SR56 506 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms