RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 TNNI3KQ59H18 835 aa17.73■□□□□ 0.43
SMC4-204ENST00000462787 DTHD1Q6ZMT9 781 aa17.73■□□□□ 0.43
SMC4-204ENST00000462787 NAP1L3Q99457 506 aaPredicted RBP17.73■□□□□ 0.43
SMC4-204ENST00000462787 ANGEL1Q9UNK9 670 aaKnown RBP17.73■□□□□ 0.43
SMC4-204ENST00000462787 SBNO2Q9Y2G9 1366 aa17.73■□□□□ 0.43
SMC4-204ENST00000462787 FPGT-TNNI3KV9GXZ4 949 aa17.73■□□□□ 0.43
SMC4-204ENST00000462787 ALDH3A1P30838 453 aa17.73■□□□□ 0.43
SMC4-204ENST00000462787 APBA1Q02410 837 aa17.73■□□□□ 0.43
SMC4-204ENST00000462787 PNOCQ13519 176 aa17.73■□□□□ 0.43
SMC4-204ENST00000462787 SARM1Q6SZW1 724 aa17.73■□□□□ 0.43
SMC4-204ENST00000462787 FBXO18Q8NFZ0 1043 aa17.73■□□□□ 0.43
SMC4-204ENST00000462787 PLEKHF1Q96S99 279 aa17.73■□□□□ 0.43
SMC4-204ENST00000462787 ZC3H6P61129 1189 aaKnown RBP17.72■□□□□ 0.43
SMC4-204ENST00000462787 TMEM132AQ24JP5 1023 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 PNMA8AQ86V59 439 aaPredicted RBP17.72■□□□□ 0.43
SMC4-204ENST00000462787 PROSER2Q86WR7 435 aaPredicted RBP17.72■□□□□ 0.43
SMC4-204ENST00000462787 SMARCC2Q8TAQ2 1214 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 HAUS4Q9H6D7 363 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 ZNF518AQ6AHZ1 1483 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 PCDHA7Q9UN72 937 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 ICE2Q659A1 982 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 KRT40Q6A162 431 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 DZIP1Q86YF9 867 aaKnown RBP17.72■□□□□ 0.43
SMC4-204ENST00000462787 MYO1AQ9UBC5 1043 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 VWA3AA6NCI4 1184 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 MAGEA9P43362 315 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 ARID5AQ03989 594 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 KBTBD3Q8NAB2 608 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 IKBKGQ9Y6K9 419 aa17.72■□□□□ 0.43
SMC4-204ENST00000462787 SMIM23A6NLE4 172 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 CCT5P48643 541 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 C11orf57Q6ZUT1 292 aaPredicted RBP17.71■□□□□ 0.43
SMC4-204ENST00000462787 CD109Q6YHK3 1445 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 ZBTB16Q05516 673 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 TSNAXIP1Q2TAA8 658 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 VWA3BQ502W6 1294 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 FBXO31Q5XUX0 539 aaPredicted RBP17.71■□□□□ 0.43
SMC4-204ENST00000462787 DIS3L2Q8IYB7 885 aaKnown RBP17.71■□□□□ 0.43
SMC4-204ENST00000462787 TAB2Q9NYJ8 693 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 NKIRAS1Q9NYS0 192 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 FAN1Q9Y2M0 1017 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 ABCA5Q8WWZ7 1642 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 RXRAP19793 462 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 DSCC1Q9BVC3 393 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 KCNK9Q9NPC2 374 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 PLXNC1O60486 1568 aa17.71■□□□□ 0.43
SMC4-204ENST00000462787 CTNNA2P26232 953 aa17.71■□□□□ 0.42
SMC4-204ENST00000462787 PARD6BQ9BYG5 372 aa17.71■□□□□ 0.42
SMC4-204ENST00000462787 BAIAP2L1Q9UHR4 511 aa17.71■□□□□ 0.42
SMC4-204ENST00000462787 PLCD1P51178 756 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 LRCH2Q5VUJ6 765 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 RPAINQ86UA6 219 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 TRMT44Q8IYL2 757 aaKnown RBP17.7■□□□□ 0.42
SMC4-204ENST00000462787 OR8K1Q8NGG5 319 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 FANCLQ9NW38 375 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 MCM7P33993 719 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 CALCOCO2Q13137 446 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 TRIM58Q8NG06 486 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 SMC6Q96SB8 1091 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 MAGEA1P43355 309 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 RASEFQ8IZ41 740 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 CACNA2D3Q8IZS8 1091 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 ADGBQ8N7X0 1667 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 ACTN4O43707 911 aaKnown RBP17.7■□□□□ 0.42
SMC4-204ENST00000462787 LONRF3Q496Y0 759 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 GRIPAP1Q4V328 841 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 GDAP1L1Q96MZ0 367 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 EYA1Q99502 592 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 VEZTQ9HBM0 779 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 HOMER2Q9NSB8 354 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 RTEL1Q9NZ71 1219 aa17.7■□□□□ 0.42
SMC4-204ENST00000462787 TBCAO75347 108 aaKnown RBP17.69■□□□□ 0.42
SMC4-204ENST00000462787 TEX13AQ9BXU3 409 aaPredicted RBP17.69■□□□□ 0.42
SMC4-204ENST00000462787 UTP11Q9Y3A2 253 aaKnown RBP17.69■□□□□ 0.42
SMC4-204ENST00000462787 TNIP1Q15025 636 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 CSGALNACT2Q8N6G5 542 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 MBD5Q9P267 1494 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 GCKP35557 465 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 FERMT2Q96AC1 680 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 MTUS1Q9ULD2 1270 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 AMOTL2Q9Y2J4 779 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 WDR7Q9Y4E6 1490 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 ATP2A1O14983 1001 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 NDUFA8P51970 172 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 VCXQ9H320 206 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 PLCB1Q9NQ66 1216 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 TMOD3Q9NYL9 352 aa17.69■□□□□ 0.42
SMC4-204ENST00000462787 EDC4Q6P2E9 1401 aaKnown RBP17.68■□□□□ 0.42
SMC4-204ENST00000462787 MXRA7P84157 204 aa17.68■□□□□ 0.42
SMC4-204ENST00000462787 MCTP2Q6DN12 878 aa17.68■□□□□ 0.42
SMC4-204ENST00000462787 CERS3Q8IU89 383 aa17.68■□□□□ 0.42
SMC4-204ENST00000462787 ERMNQ8TAM6 284 aa17.68■□□□□ 0.42
SMC4-204ENST00000462787 CRNKL1Q9BZJ0 848 aaKnown RBP17.68■□□□□ 0.42
SMC4-204ENST00000462787 RNF40O75150 1001 aa17.68■□□□□ 0.42
SMC4-204ENST00000462787 ZNF174Q15697 407 aa17.68■□□□□ 0.42
SMC4-204ENST00000462787 SNCBQ16143 134 aa17.68■□□□□ 0.42
SMC4-204ENST00000462787 KMT5BQ4FZB7 885 aa17.68■□□□□ 0.42
SMC4-204ENST00000462787 WDR66Q8TBY9 1149 aa17.68■□□□□ 0.42
SMC4-204ENST00000462787 SAMD9Q5K651 1589 aa17.68■□□□□ 0.42
SMC4-204ENST00000462787 DDX21Q9NR30 783 aaKnown RBP eCLIP17.68■□□□□ 0.421e-26■■■■■ 198.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms