RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 PPP1R1BQ9UD71 204 aaPredicted RBP9.78□□□□□ -0.84
RPA3-205ENST00000462723 PALD1Q9ULE6 856 aa9.78□□□□□ -0.84
RPA3-205ENST00000462723 KIAA1551Q9HCM1 1747 aa9.78□□□□□ -0.84
RPA3-205ENST00000462723 TULP1O00294 542 aaPredicted RBP9.77□□□□□ -0.85
RPA3-205ENST00000462723 LDHBP07195 334 aaKnown RBP9.77□□□□□ -0.85
RPA3-205ENST00000462723 HSPD1P10809 573 aaKnown RBP9.77□□□□□ -0.85
RPA3-205ENST00000462723 KCNA3P22001 575 aa9.77□□□□□ -0.85
RPA3-205ENST00000462723 NECTIN1Q15223 517 aa9.77□□□□□ -0.85
RPA3-205ENST00000462723 DALRD3Q5D0E6 543 aaKnown RBP9.77□□□□□ -0.85
RPA3-205ENST00000462723 CREB3L3Q68CJ9 461 aa9.77□□□□□ -0.85
RPA3-205ENST00000462723 DZIP1Q86YF9 867 aaKnown RBP9.77□□□□□ -0.85
RPA3-205ENST00000462723 ANKK1Q8NFD2 765 aa9.77□□□□□ -0.85
RPA3-205ENST00000462723 SPON1Q9HCB6 807 aa9.77□□□□□ -0.85
RPA3-205ENST00000462723 CTNNA3Q9UI47 895 aa9.77□□□□□ -0.85
RPA3-205ENST00000462723 SNX14Q9Y5W7 946 aa9.77□□□□□ -0.85
RPA3-205ENST00000462723 FAM205AQ6ZU69 1335 aa9.77□□□□□ -0.85
RPA3-205ENST00000462723 MAGEB6P1A0A0J9YX57 407 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 SLC27A2O14975 620 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 MBD4O95243 580 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 GNAT2P19087 354 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 GSTO1P78417 241 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 MECOMQ03112 1051 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 KCNC4Q03721 635 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 KRT32Q14532 448 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 PODNQ7Z5L7 613 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 HSCBQ8IWL3 235 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 KCNB2Q92953 911 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 SNX21Q969T3 373 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 NSUN4Q96CB9 384 aaKnown RBP9.76□□□□□ -0.85
RPA3-205ENST00000462723 STRBPQ96SI9 672 aaKnown RBP9.76□□□□□ -0.85
RPA3-205ENST00000462723 PSMD1Q99460 953 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 LARP6Q9BRS8 491 aaKnown RBP9.76□□□□□ -0.85
RPA3-205ENST00000462723 JAG2Q9Y219 1238 aa9.76□□□□□ -0.85
RPA3-205ENST00000462723 BRCA1P38398 1863 aaKnown RBP9.76□□□□□ -0.85
RPA3-205ENST00000462723 SNED1Q8TER0 1413 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 APPP05067 770 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 LDHCP07864 332 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 PSMA5P28066 241 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 PRDX5P30044 214 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 GTF2IP78347 998 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 KIAA2012Q0VF49 1180 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 E2F4Q16254 413 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 MFSD14BQ5SR56 506 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 VPS53Q5VIR6 699 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 ILDR2Q71H61 639 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 SLF2Q8IX21 1173 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 FBXW7Q969H0 707 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 NACAP1Q9BZK3 213 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 ARMT1Q9H993 441 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 CHD4Q14839 1912 aa9.75□□□□□ -0.85
RPA3-205ENST00000462723 RPAP1Q9BWH6 1393 aaPredicted RBP9.75□□□□□ -0.85
RPA3-205ENST00000462723 PATL2C9JE40 543 aaKnown RBP9.74□□□□□ -0.85
RPA3-205ENST00000462723 PPIP5K2O43314 1243 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 NEK4P51957 841 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 AOC3Q16853 763 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 IMMTQ16891 758 aaKnown RBP9.74□□□□□ -0.85
RPA3-205ENST00000462723 TSGA10IPQ3SY00 556 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 TTLL5Q6EMB2 1281 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 LCORLQ8N3X6 602 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 MIGA1Q8NAN2 632 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 KCNV2Q8TDN2 545 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 JAKMIP1Q96N16 626 aaKnown RBP9.74□□□□□ -0.85
RPA3-205ENST00000462723 NOL10Q9BSC4 688 aaKnown RBP9.74□□□□□ -0.85
RPA3-205ENST00000462723 TBC1D2Q9BYX2 928 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 TM6SF1Q9BZW5 370 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 VPS33BQ9H267 617 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 SUGT1Q9Y2Z0 365 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 SLC4A4Q9Y6R1 1079 aa9.74□□□□□ -0.85
RPA3-205ENST00000462723 ECE2O60344 883 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 BAG3O95817 575 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 FGAP02671 866 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 CYP21A2P08686 494 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 CASTP20810 708 aaKnown RBP9.73□□□□□ -0.85
RPA3-205ENST00000462723 MCM2P49736 904 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 ALX1Q15699 326 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 NYAP1Q6ZVC0 841 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 ADGRA1Q86SQ6 560 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 CERS3Q8IU89 383 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 ZNF384Q8TF68 577 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 DDX27Q96GQ7 796 aaKnown RBP9.73□□□□□ -0.85
RPA3-205ENST00000462723 UPF3BQ9BZI7 483 aaKnown RBP9.73□□□□□ -0.85
RPA3-205ENST00000462723 DBNDD1Q9H9R9 158 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 CYP46A1Q9Y6A2 500 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 MYH2Q9UKX2 1941 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 ZMYM6O95789 1325 aa9.73□□□□□ -0.85
RPA3-205ENST00000462723 LAMA4Q16363 1823 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 K7ELQ4 463 aaPredicted RBP9.72□□□□□ -0.85
RPA3-205ENST00000462723 ZNF213O14771 459 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 FOXP2O15409 715 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 HMGB1P09429 215 aaKnown RBP9.72□□□□□ -0.85
RPA3-205ENST00000462723 PRKCSHP14314 528 aaPredicted RBP9.72□□□□□ -0.85
RPA3-205ENST00000462723 TDO2P48775 406 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 FKBP1AP62942 108 aaKnown RBP9.72□□□□□ -0.85
RPA3-205ENST00000462723 MFSD10Q14728 455 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 PPP1R15BQ5SWA1 713 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 STRIP1Q5VSL9 837 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 BLOC1S2Q6QNY1 142 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 IFNL3Q8IZI9 196 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 LARGE2Q8N3Y3 721 aa9.72□□□□□ -0.85
RPA3-205ENST00000462723 RIOK1Q9BRS2 568 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms