RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 NPM3O75607 178 aaKnown RBP21.39■■□□□ 1.01
SCARNA2-201ENST00000458748 IFIT2P09913 472 aaKnown RBP21.39■■□□□ 1.01
SCARNA2-201ENST00000458748 PLCG2P16885 1265 aa21.39■■□□□ 1.01
SCARNA2-201ENST00000458748 RGS3P49796 1198 aa21.39■■□□□ 1.01
SCARNA2-201ENST00000458748 GTF2A2P52657 109 aa21.39■■□□□ 1.01
SCARNA2-201ENST00000458748 NAA16Q6N069 864 aaPredicted RBP21.39■■□□□ 1.01
SCARNA2-201ENST00000458748 ZSCAN29Q8IWY8 852 aaPredicted RBP21.39■■□□□ 1.01
SCARNA2-201ENST00000458748 MS4A4AQ96JQ5 239 aa21.39■■□□□ 1.01
SCARNA2-201ENST00000458748 ZNF112Q9UJU3 913 aa21.39■■□□□ 1.01
SCARNA2-201ENST00000458748 SNCAIPQ9Y6H5 919 aa21.39■■□□□ 1.01
SCARNA2-201ENST00000458748 APBB1O00213 710 aa21.38■■□□□ 1.01
SCARNA2-201ENST00000458748 IGF2BP3O00425 579 aaKnown RBP eCLIP21.38■■□□□ 1.01
SCARNA2-201ENST00000458748 SOX10P56693 466 aa21.38■■□□□ 1.01
SCARNA2-201ENST00000458748 MIGA2Q7L4E1 593 aa21.38■■□□□ 1.01
SCARNA2-201ENST00000458748 SIRT2Q8IXJ6 389 aa21.38■■□□□ 1.01
SCARNA2-201ENST00000458748 ZNF384Q8TF68 577 aa21.38■■□□□ 1.01
SCARNA2-201ENST00000458748 IL1RAPL2Q9NP60 686 aa21.38■■□□□ 1.01
SCARNA2-201ENST00000458748 TLR7Q9NYK1 1049 aaKnown RBP21.38■■□□□ 1.01
SCARNA2-201ENST00000458748 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
SCARNA2-201ENST00000458748 WDHD1O75717 1129 aaPredicted RBP21.37■■□□□ 1.01
SCARNA2-201ENST00000458748 CYP2E1P05181 493 aaPredicted RBP21.37■■□□□ 1.01
SCARNA2-201ENST00000458748 CERS3Q8IU89 383 aa21.37■■□□□ 1.01
SCARNA2-201ENST00000458748 ZKSCAN4Q969J2 545 aaPredicted RBP21.37■■□□□ 1.01
SCARNA2-201ENST00000458748 OTUD5Q96G74 571 aa21.37■■□□□ 1.01
SCARNA2-201ENST00000458748 FKTNO75072 461 aa21.36■■□□□ 1.01
SCARNA2-201ENST00000458748 ZAP70P43403 619 aa21.36■■□□□ 1.01
SCARNA2-201ENST00000458748 RRP1P56182 461 aaKnown RBP21.36■■□□□ 1.01
SCARNA2-201ENST00000458748 RHBDL3P58872 404 aa21.36■■□□□ 1.01
SCARNA2-201ENST00000458748 TTF1Q15361 905 aaPredicted RBP21.36■■□□□ 1.01
SCARNA2-201ENST00000458748 PKN2Q16513 984 aaKnown RBP21.36■■□□□ 1.01
SCARNA2-201ENST00000458748 ZFPM1Q8IX07 1006 aa21.36■■□□□ 1.01
SCARNA2-201ENST00000458748 CNKSR2Q8WXI2 1034 aa21.36■■□□□ 1.01
SCARNA2-201ENST00000458748 HPS5Q9UPZ3 1129 aa21.36■■□□□ 1.01
SCARNA2-201ENST00000458748 MAP3K10Q02779 954 aa21.35■■□□□ 1.01
SCARNA2-201ENST00000458748 PPATQ06203 517 aa21.35■■□□□ 1.01
SCARNA2-201ENST00000458748 MAP3K12Q12852 859 aa21.35■■□□□ 1.01
SCARNA2-201ENST00000458748 PPIL2Q13356 520 aa21.35■■□□□ 1.01
SCARNA2-201ENST00000458748 PICALMQ13492 652 aa21.35■■□□□ 1.01
SCARNA2-201ENST00000458748 PTPN18Q99952 460 aa21.35■■□□□ 1.01
SCARNA2-201ENST00000458748 CCL15-CCL14A0A0B4J2E2 113 aa21.34■■□□□ 1.01
SCARNA2-201ENST00000458748 CETPP11597 493 aa21.34■■□□□ 1.01
SCARNA2-201ENST00000458748 INPP5BP32019 993 aa21.34■■□□□ 1.01
SCARNA2-201ENST00000458748 CCL15Q16663 113 aa21.34■■□□□ 1.01
SCARNA2-201ENST00000458748 NOL9Q5SY16 702 aaKnown RBP21.34■■□□□ 1.01
SCARNA2-201ENST00000458748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.34■■□□□ 1.01
SCARNA2-201ENST00000458748 LRRCC1Q9C099 1032 aa21.34■■□□□ 1.01
SCARNA2-201ENST00000458748 ATRNL1Q5VV63 1379 aa21.34■■□□□ 1.01
SCARNA2-201ENST00000458748 COL2A1P02458 1487 aaPredicted RBP21.33■■□□□ 1.01
SCARNA2-201ENST00000458748 MYO5AQ9Y4I1 1855 aaKnown RBP21.33■■□□□ 1.01
SCARNA2-201ENST00000458748 IDH1O75874 414 aaKnown RBP21.33■■□□□ 1.01
SCARNA2-201ENST00000458748 SNAPC2Q13487 334 aa21.33■■□□□ 1.01
SCARNA2-201ENST00000458748 TEX11Q8IYF3 940 aa21.33■■□□□ 1.01
SCARNA2-201ENST00000458748 BRI3BPQ8WY22 251 aa21.33■■□□□ 1.01
SCARNA2-201ENST00000458748 ZCCHC17Q9NP64 241 aaKnown RBP21.33■■□□□ 1.01
SCARNA2-201ENST00000458748 DDX4Q9NQI0 724 aaKnown RBP21.33■■□□□ 1.01
SCARNA2-201ENST00000458748 PPP4CP60510 307 aa21.32■■□□□ 1
SCARNA2-201ENST00000458748 SH3BP5LQ7L8J4 393 aa21.32■■□□□ 1
SCARNA2-201ENST00000458748 BCL11AQ9H165 835 aa21.32■■□□□ 1
SCARNA2-201ENST00000458748 PIH1D3Q9NQM4 214 aaKnown RBP21.32■■□□□ 1
SCARNA2-201ENST00000458748 AATFQ9NY61 560 aaKnown RBP eCLIP21.32■■□□□ 1not detected■■■■■ 63.5
SCARNA2-201ENST00000458748 DDTLA6NHG4 134 aaPredicted RBP21.31■■□□□ 1
SCARNA2-201ENST00000458748 PHF20L1A8MW92 1017 aa21.31■■□□□ 1
SCARNA2-201ENST00000458748 IRF6O14896 467 aa21.31■■□□□ 1
SCARNA2-201ENST00000458748 CRHR2Q13324 411 aa21.31■■□□□ 1
SCARNA2-201ENST00000458748 TBC1D12O60347 775 aa21.3■■□□□ 1
SCARNA2-201ENST00000458748 CYP7A1P22680 504 aa21.3■■□□□ 1
SCARNA2-201ENST00000458748 DHX36Q9H2U1 1008 aaKnown RBP21.3■■□□□ 1
SCARNA2-201ENST00000458748 FBXO46Q6PJ61 603 aaPredicted RBP21.29■■□□□ 1
SCARNA2-201ENST00000458748 MAGEB6Q8N7X4 407 aa21.29■■□□□ 1
SCARNA2-201ENST00000458748 SH3RF3Q8TEJ3 882 aaPredicted RBP21.29■■□□□ 1
SCARNA2-201ENST00000458748 OSBPL5Q9H0X9 879 aaPredicted RBP21.29■■□□□ 1
SCARNA2-201ENST00000458748 ZFYVE28Q9HCC9 887 aa21.29■■□□□ 1
SCARNA2-201ENST00000458748 PICK1Q9NRD5 415 aa21.29■■□□□ 1
SCARNA2-201ENST00000458748 KCNH4Q9UQ05 1017 aa21.29■■□□□ 1
SCARNA2-201ENST00000458748 FOCADQ5VW36 1801 aa21.29■■□□□ 1
SCARNA2-201ENST00000458748 CTNND1O60716 968 aaKnown RBP21.28■■□□□ 1
SCARNA2-201ENST00000458748 TAF1CQ15572 869 aaPredicted RBP21.28■■□□□ 1
SCARNA2-201ENST00000458748 SCYL3Q8IZE3 742 aa21.28■■□□□ 1
SCARNA2-201ENST00000458748 FAM43AQ8N2R8 423 aa21.28■■□□□ 1
SCARNA2-201ENST00000458748 ERO1AQ96HE7 468 aa21.28■■□□□ 1
SCARNA2-201ENST00000458748 GPATCH3Q96I76 525 aa21.28■■□□□ 1
SCARNA2-201ENST00000458748 DCTPP1Q9H773 170 aa21.28■■□□□ 1
SCARNA2-201ENST00000458748 CDK5RAP2Q96SN8 1893 aa21.28■■□□□ 1
SCARNA2-201ENST00000458748 DOCK1Q14185 1865 aa21.27■■□□□ 1
SCARNA2-201ENST00000458748 CXCL11O14625 94 aa21.27■■□□□ 1
SCARNA2-201ENST00000458748 AAMPQ13685 434 aa21.27■■□□□ 1
SCARNA2-201ENST00000458748 DNAJC2Q99543 621 aaKnown RBP21.27■■□□□ 1
SCARNA2-201ENST00000458748 TRIM34Q9BYJ4 488 aa21.27■■□□□ 1
SCARNA2-201ENST00000458748 HERC5Q9UII4 1024 aaKnown RBP21.27■■□□□ 1
SCARNA2-201ENST00000458748 BTBD19C9JJ37 291 aa21.26■□□□□ 0.99
SCARNA2-201ENST00000458748 ATP5JP18859 108 aa21.26■□□□□ 0.99
SCARNA2-201ENST00000458748 SP3Q02447 781 aa21.26■□□□□ 0.99
SCARNA2-201ENST00000458748 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.26■□□□□ 0.99
SCARNA2-201ENST00000458748 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.26■□□□□ 0.99
SCARNA2-201ENST00000458748 PI4KBQ9UBF8 816 aa21.26■□□□□ 0.99
SCARNA2-201ENST00000458748 TRIM17Q9Y577 477 aa21.26■□□□□ 0.99
SCARNA2-201ENST00000458748 GOLIM4O00461 696 aa21.25■□□□□ 0.99
SCARNA2-201ENST00000458748 PTPRAP18433 802 aa21.25■□□□□ 0.99
SCARNA2-201ENST00000458748 ANKRD23Q86SG2 305 aa21.25■□□□□ 0.99
SCARNA2-201ENST00000458748 ADGRA1Q86SQ6 560 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms