RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 AFG3L2Q9Y4W6 797 aa16.02■□□□□ 0.16
AC004540.1-204ENST00000449537 MUC3AQ02505 3323 aa16.01■□□□□ 0.15
AC004540.1-204ENST00000449537 PRKAR2AP13861 404 aaKnown RBP16.01■□□□□ 0.15
AC004540.1-204ENST00000449537 PTPRAP18433 802 aa16.01■□□□□ 0.15
AC004540.1-204ENST00000449537 TAF7LQ5H9L4 462 aa16.01■□□□□ 0.15
AC004540.1-204ENST00000449537 MAP3K21Q5TCX8 1036 aa16.01■□□□□ 0.15
AC004540.1-204ENST00000449537 HHIPL2Q6UWX4 724 aa16.01■□□□□ 0.15
AC004540.1-204ENST00000449537 TRIB2Q92519 343 aa16.01■□□□□ 0.15
AC004540.1-204ENST00000449537 RUNDC1Q96C34 613 aa16.01■□□□□ 0.15
AC004540.1-204ENST00000449537 ZNF594Q96JF6 807 aaPredicted RBP16.01■□□□□ 0.15
AC004540.1-204ENST00000449537 IQSEC3Q9UPP2 1182 aaPredicted RBP16.01■□□□□ 0.15
AC004540.1-204ENST00000449537 FOXO4P98177 505 aa16■□□□□ 0.15
AC004540.1-204ENST00000449537 SCYL3Q8IZE3 742 aa16■□□□□ 0.15
AC004540.1-204ENST00000449537 PNMA3Q9UL41 463 aa16■□□□□ 0.15
AC004540.1-204ENST00000449537 MAST3O60307 1309 aa15.99■□□□□ 0.15
AC004540.1-204ENST00000449537 CYP2B6P20813 491 aa15.99■□□□□ 0.15
AC004540.1-204ENST00000449537 GCLCP48506 637 aaPredicted RBP15.99■□□□□ 0.15
AC004540.1-204ENST00000449537 GNAI1P63096 354 aa15.99■□□□□ 0.15
AC004540.1-204ENST00000449537 CCDC57Q2TAC2 916 aa15.99■□□□□ 0.15
AC004540.1-204ENST00000449537 FBXO33Q7Z6M2 555 aa15.99■□□□□ 0.15
AC004540.1-204ENST00000449537 SENP6Q9GZR1 1112 aaPredicted RBP15.99■□□□□ 0.15
AC004540.1-204ENST00000449537 AGTPBP1Q9UPW5 1226 aa15.99■□□□□ 0.15
AC004540.1-204ENST00000449537 PHF20L1A8MW92 1017 aa15.98■□□□□ 0.15
AC004540.1-204ENST00000449537 C9orf50Q5SZB4 431 aa15.98■□□□□ 0.15
AC004540.1-204ENST00000449537 LHX8Q68G74 356 aa15.98■□□□□ 0.15
AC004540.1-204ENST00000449537 USP38Q8NB14 1042 aa15.98■□□□□ 0.15
AC004540.1-204ENST00000449537 ATXN2LQ8WWM7 1075 aaKnown RBP15.98■□□□□ 0.15
AC004540.1-204ENST00000449537 STK31Q9BXU1 1019 aa15.98■□□□□ 0.15
AC004540.1-204ENST00000449537 IFT57Q9NWB7 429 aa15.98■□□□□ 0.15
AC004540.1-204ENST00000449537 SUGT1Q9Y2Z0 365 aa15.98■□□□□ 0.15
AC004540.1-204ENST00000449537 ARIH1Q9Y4X5 557 aaPredicted RBP15.98■□□□□ 0.15
AC004540.1-204ENST00000449537 A0A1B0GUL6 1792 aa15.98■□□□□ 0.15
AC004540.1-204ENST00000449537 SYNGAP1Q96PV0 1343 aa15.97■□□□□ 0.15
AC004540.1-204ENST00000449537 TRIM75PA6NK02 468 aa15.97■□□□□ 0.15
AC004540.1-204ENST00000449537 LMBR1LQ6UX01 489 aa15.97■□□□□ 0.15
AC004540.1-204ENST00000449537 NCOR1O75376 2440 aa15.96■□□□□ 0.15
AC004540.1-204ENST00000449537 XRCC5P13010 732 aaKnown RBP15.96■□□□□ 0.15
AC004540.1-204ENST00000449537 CACNB2Q08289 660 aaPredicted RBP15.96■□□□□ 0.15
AC004540.1-204ENST00000449537 CAVIN4Q5BKX8 364 aa15.96■□□□□ 0.15
AC004540.1-204ENST00000449537 TRMT44Q8IYL2 757 aaKnown RBP15.96■□□□□ 0.15
AC004540.1-204ENST00000449537 LINS1Q8NG48 757 aa15.96■□□□□ 0.15
AC004540.1-204ENST00000449537 ADAMTS19Q8TE59 1207 aa15.96■□□□□ 0.15
AC004540.1-204ENST00000449537 NUDT12Q9BQG2 462 aa15.96■□□□□ 0.15
AC004540.1-204ENST00000449537 C1QTNF1Q9BXJ1 281 aa15.96■□□□□ 0.15
AC004540.1-204ENST00000449537 LRRFIP2Q9Y608 721 aaKnown RBP15.96■□□□□ 0.15
AC004540.1-204ENST00000449537 ATN1P54259 1190 aaPredicted RBP15.95■□□□□ 0.14
AC004540.1-204ENST00000449537 CALD1Q05682 793 aaKnown RBP15.95■□□□□ 0.14
AC004540.1-204ENST00000449537 NFIAQ12857 509 aa15.95■□□□□ 0.14
AC004540.1-204ENST00000449537 TREML2Q5T2D2 321 aa15.95■□□□□ 0.14
AC004540.1-204ENST00000449537 CDC42EP5Q6NZY7 148 aa15.95■□□□□ 0.14
AC004540.1-204ENST00000449537 G2E3Q7L622 706 aa15.95■□□□□ 0.14
AC004540.1-204ENST00000449537 ASB2Q96Q27 587 aa15.95■□□□□ 0.14
AC004540.1-204ENST00000449537 CCND3P30281 292 aaPredicted RBP15.94■□□□□ 0.14
AC004540.1-204ENST00000449537 GRIN2CQ14957 1233 aa15.94■□□□□ 0.14
AC004540.1-204ENST00000449537 TSPYL6Q8N831 410 aa15.94■□□□□ 0.14
AC004540.1-204ENST00000449537 UHRF1Q96T88 793 aaPredicted RBP15.94■□□□□ 0.14
AC004540.1-204ENST00000449537 FAM198AQ9UFP1 575 aa15.94■□□□□ 0.14
AC004540.1-204ENST00000449537 CTNND1O60716 968 aaKnown RBP15.93■□□□□ 0.14
AC004540.1-204ENST00000449537 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
AC004540.1-204ENST00000449537 ZKSCAN1P17029 563 aaPredicted RBP15.93■□□□□ 0.14
AC004540.1-204ENST00000449537 PABPC4Q13310 644 aaKnown RBP eCLIP15.93■□□□□ 0.14
AC004540.1-204ENST00000449537 ZFPM1Q8IX07 1006 aa15.93■□□□□ 0.14
AC004540.1-204ENST00000449537 PROCA1Q8NCQ7 364 aaPredicted RBP15.93■□□□□ 0.14
AC004540.1-204ENST00000449537 DNAAF4Q8WXU2 420 aa15.93■□□□□ 0.14
AC004540.1-204ENST00000449537 RTP1P59025 263 aa15.92■□□□□ 0.14
AC004540.1-204ENST00000449537 MRPS5P82675 430 aaKnown RBP15.92■□□□□ 0.14
AC004540.1-204ENST00000449537 PDE3AQ14432 1141 aa15.92■□□□□ 0.14
AC004540.1-204ENST00000449537 IL27Q8NEV9 243 aa15.92■□□□□ 0.14
AC004540.1-204ENST00000449537 SOCS4Q8WXH5 440 aa15.92■□□□□ 0.14
AC004540.1-204ENST00000449537 PPM1EQ8WY54 764 aa15.92■□□□□ 0.14
AC004540.1-204ENST00000449537 BADQ92934 168 aa15.92■□□□□ 0.14
AC004540.1-204ENST00000449537 SPINK5Q9NQ38 1064 aaPredicted RBP15.92■□□□□ 0.14
AC004540.1-204ENST00000449537 USP40Q9NVE5 1235 aa15.92■□□□□ 0.14
AC004540.1-204ENST00000449537 HCN4Q9Y3Q4 1203 aa15.92■□□□□ 0.14
AC004540.1-204ENST00000449537 EPHA10Q5JZY3 1008 aa15.91■□□□□ 0.14
AC004540.1-204ENST00000449537 PUS3Q9BZE2 481 aaKnown RBP15.91■□□□□ 0.14
AC004540.1-204ENST00000449537 ASCC2Q9H1I8 757 aaPredicted RBP15.91■□□□□ 0.14
AC004540.1-204ENST00000449537 THEGQ9P2T0 379 aa15.91■□□□□ 0.14
AC004540.1-204ENST00000449537 ATP11BQ9Y2G3 1177 aa15.91■□□□□ 0.14
AC004540.1-204ENST00000449537 DAGLAQ9Y4D2 1042 aa15.91■□□□□ 0.14
AC004540.1-204ENST00000449537 PTPRFP10586 1907 aa15.9■□□□□ 0.14
AC004540.1-204ENST00000449537 MAP3K10Q02779 954 aa15.9■□□□□ 0.14
AC004540.1-204ENST00000449537 CCDC84Q86UT8 332 aaPredicted RBP15.9■□□□□ 0.14
AC004540.1-204ENST00000449537 ZSCAN29Q8IWY8 852 aaPredicted RBP15.9■□□□□ 0.14
AC004540.1-204ENST00000449537 PRDM5Q9NQX1 630 aaPredicted RBP15.9■□□□□ 0.14
AC004540.1-204ENST00000449537 MORF4L1Q9UBU8 362 aa15.9■□□□□ 0.14
AC004540.1-204ENST00000449537 DNAH12Q6ZR08 3092 aa15.9■□□□□ 0.14
AC004540.1-204ENST00000449537 CDH23Q9H251 3354 aa15.9■□□□□ 0.14
AC004540.1-204ENST00000449537 MROH5Q6ZUA9 1318 aa15.9■□□□□ 0.14
AC004540.1-204ENST00000449537 PLXNB2O15031 1838 aa15.89■□□□□ 0.13
AC004540.1-204ENST00000449537 SPP2Q13103 211 aa15.89■□□□□ 0.13
AC004540.1-204ENST00000449537 FKBP5Q13451 457 aaPredicted RBP15.89■□□□□ 0.13
AC004540.1-204ENST00000449537 WDR43Q15061 677 aaKnown RBP eCLIP15.89■□□□□ 0.13
AC004540.1-204ENST00000449537 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.89■□□□□ 0.13
AC004540.1-204ENST00000449537 ATRNL1Q5VV63 1379 aa15.88■□□□□ 0.13
AC004540.1-204ENST00000449537 ENTPD3O75355 529 aa15.88■□□□□ 0.13
AC004540.1-204ENST00000449537 RGS2P41220 211 aa15.88■□□□□ 0.13
AC004540.1-204ENST00000449537 FLIIQ13045 1269 aa15.88■□□□□ 0.13
AC004540.1-204ENST00000449537 DIXDC1Q155Q3 683 aa15.88■□□□□ 0.13
AC004540.1-204ENST00000449537 CCL14Q16627 93 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms