RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 IDH1O75874 414 aaKnown RBP22.91■■□□□ 1.26
HDAC4-203ENST00000445704 SH3RF3Q8TEJ3 882 aaPredicted RBP22.91■■□□□ 1.26
HDAC4-203ENST00000445704 ZKSCAN4Q969J2 545 aaPredicted RBP22.91■■□□□ 1.26
HDAC4-203ENST00000445704 OPTNQ96CV9 577 aa22.91■■□□□ 1.26
HDAC4-203ENST00000445704 ZNF341Q9BYN7 854 aa22.91■■□□□ 1.26
HDAC4-203ENST00000445704 AATFQ9NY61 560 aaKnown RBP eCLIP22.91■■□□□ 1.26
HDAC4-203ENST00000445704 SLURP2P0DP57 97 aa22.9■■□□□ 1.26
HDAC4-203ENST00000445704 INPP5BP32019 993 aa22.9■■□□□ 1.26
HDAC4-203ENST00000445704 SREBF2Q12772 1141 aa22.9■■□□□ 1.26
HDAC4-203ENST00000445704 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.9■■□□□ 1.26
HDAC4-203ENST00000445704 CSADQ9Y600 493 aa22.9■■□□□ 1.26
HDAC4-203ENST00000445704 MANSC4A6NHS7 340 aaPredicted RBP22.89■■□□□ 1.25
HDAC4-203ENST00000445704 IGSF3O75054 1194 aa22.89■■□□□ 1.25
HDAC4-203ENST00000445704 MAP4K4O95819 1239 aaPredicted RBP22.89■■□□□ 1.25
HDAC4-203ENST00000445704 CYP7A1P22680 504 aa22.89■■□□□ 1.25
HDAC4-203ENST00000445704 ZSCAN29Q8IWY8 852 aaPredicted RBP22.89■■□□□ 1.25
HDAC4-203ENST00000445704 TEX11Q8IYF3 940 aa22.89■■□□□ 1.25
HDAC4-203ENST00000445704 TNS4Q8IZW8 715 aa22.89■■□□□ 1.25
HDAC4-203ENST00000445704 ZNF112Q9UJU3 913 aa22.89■■□□□ 1.25
HDAC4-203ENST00000445704 SPDYE5A6NIY4 337 aa22.88■■□□□ 1.25
HDAC4-203ENST00000445704 NPM3O75607 178 aaKnown RBP22.88■■□□□ 1.25
HDAC4-203ENST00000445704 PPP4CP60510 307 aa22.88■■□□□ 1.25
HDAC4-203ENST00000445704 MAGEB6Q8N7X4 407 aa22.88■■□□□ 1.25
HDAC4-203ENST00000445704 EDC3Q96F86 508 aaKnown RBP22.88■■□□□ 1.25
HDAC4-203ENST00000445704 DNAJC2Q99543 621 aaKnown RBP22.88■■□□□ 1.25
HDAC4-203ENST00000445704 NOL10Q9BSC4 688 aaKnown RBP22.88■■□□□ 1.25
HDAC4-203ENST00000445704 CDK5RAP2Q96SN8 1893 aa22.88■■□□□ 1.25
HDAC4-203ENST00000445704 DYNLL1P63167 89 aaKnown RBP22.87■■□□□ 1.25
HDAC4-203ENST00000445704 OTUD5Q96G74 571 aa22.87■■□□□ 1.25
HDAC4-203ENST00000445704 OSBPL5Q9H0X9 879 aaPredicted RBP22.87■■□□□ 1.25
HDAC4-203ENST00000445704 BOLA2Q9H3K6 86 aa22.87■■□□□ 1.25
HDAC4-203ENST00000445704 COL2A1P02458 1487 aaPredicted RBP22.86■■□□□ 1.25
HDAC4-203ENST00000445704 IGF2BP3O00425 579 aaKnown RBP eCLIP22.86■■□□□ 1.25
HDAC4-203ENST00000445704 GOLIM4O00461 696 aa22.86■■□□□ 1.25
HDAC4-203ENST00000445704 BAG3O95817 575 aa22.86■■□□□ 1.25
HDAC4-203ENST00000445704 ATP5JP18859 108 aa22.86■■□□□ 1.25
HDAC4-203ENST00000445704 MAP3K12Q12852 859 aa22.86■■□□□ 1.25
HDAC4-203ENST00000445704 MIGA1Q8NAN2 632 aa22.86■■□□□ 1.25
HDAC4-203ENST00000445704 FOCADQ5VW36 1801 aa22.86■■□□□ 1.25
HDAC4-203ENST00000445704 CASP8AP2Q9UKL3 1982 aa22.85■■□□□ 1.25
HDAC4-203ENST00000445704 TBC1D8O95759 1140 aa22.85■■□□□ 1.25
HDAC4-203ENST00000445704 MAP3K10Q02779 954 aa22.85■■□□□ 1.25
HDAC4-203ENST00000445704 TTF1Q15361 905 aaPredicted RBP22.85■■□□□ 1.25
HDAC4-203ENST00000445704 IFNL1Q8IU54 200 aa22.85■■□□□ 1.25
HDAC4-203ENST00000445704 MS4A4AQ96JQ5 239 aa22.85■■□□□ 1.25
HDAC4-203ENST00000445704 PHF20L1A8MW92 1017 aa22.84■■□□□ 1.25
HDAC4-203ENST00000445704 PLCG2P16885 1265 aa22.84■■□□□ 1.25
HDAC4-203ENST00000445704 ERO1BQ86YB8 467 aa22.84■■□□□ 1.25
HDAC4-203ENST00000445704 PTPN18Q99952 460 aa22.84■■□□□ 1.25
HDAC4-203ENST00000445704 SIPA1L1O43166 1804 aa22.84■■□□□ 1.25
HDAC4-203ENST00000445704 TESPA1A2RU30 521 aaPredicted RBP22.83■■□□□ 1.25
HDAC4-203ENST00000445704 FAM196BA6NMK8 535 aa22.83■■□□□ 1.25
HDAC4-203ENST00000445704 INHBEP58166 350 aa22.83■■□□□ 1.25
HDAC4-203ENST00000445704 NOL9Q5SY16 702 aaKnown RBP22.83■■□□□ 1.25
HDAC4-203ENST00000445704 MAPKAPK5Q8IW41 473 aa22.83■■□□□ 1.25
HDAC4-203ENST00000445704 TGFBRAP1Q8WUH2 860 aa22.83■■□□□ 1.25
HDAC4-203ENST00000445704 HAUS7Q99871 368 aa22.83■■□□□ 1.25
HDAC4-203ENST00000445704 R3HDMLQ9H3Y0 253 aa22.83■■□□□ 1.25
HDAC4-203ENST00000445704 PAG1Q9NWQ8 432 aa22.83■■□□□ 1.25
HDAC4-203ENST00000445704 FLT1P17948 1338 aa22.82■■□□□ 1.24
HDAC4-203ENST00000445704 IRF6O14896 467 aa22.82■■□□□ 1.24
HDAC4-203ENST00000445704 PDE6AP16499 860 aa22.82■■□□□ 1.24
HDAC4-203ENST00000445704 IFFO2Q5TF58 517 aa22.82■■□□□ 1.24
HDAC4-203ENST00000445704 BRI3BPQ8WY22 251 aa22.82■■□□□ 1.24
HDAC4-203ENST00000445704 PPIL2Q13356 520 aa22.81■■□□□ 1.24
HDAC4-203ENST00000445704 SLC9C2Q5TAH2 1124 aa22.81■■□□□ 1.24
HDAC4-203ENST00000445704 TSHZ3Q63HK5 1081 aa22.81■■□□□ 1.24
HDAC4-203ENST00000445704 CFHR5Q9BXR6 569 aa22.81■■□□□ 1.24
HDAC4-203ENST00000445704 ECHDC1Q9NTX5 307 aa22.81■■□□□ 1.24
HDAC4-203ENST00000445704 SUPT16HQ9Y5B9 1047 aaKnown RBP22.81■■□□□ 1.24
HDAC4-203ENST00000445704 TCRBV5S4A2TA0A5A2 114 aa22.8■■□□□ 1.24
HDAC4-203ENST00000445704 GTF2A2P52657 109 aa22.8■■□□□ 1.24
HDAC4-203ENST00000445704 SLFNL1Q499Z3 407 aa22.8■■□□□ 1.24
HDAC4-203ENST00000445704 TMED8Q6PL24 325 aaPredicted RBP22.8■■□□□ 1.24
HDAC4-203ENST00000445704 EXOC6Q8TAG9 804 aa22.8■■□□□ 1.24
HDAC4-203ENST00000445704 RIOK1Q9BRS2 568 aaKnown RBP22.8■■□□□ 1.24
HDAC4-203ENST00000445704 ZNF532Q9HCE3 1301 aa22.8■■□□□ 1.24
HDAC4-203ENST00000445704 DOCK1Q14185 1865 aa22.79■■□□□ 1.24
HDAC4-203ENST00000445704 CCL15-CCL14A0A0B4J2E2 113 aa22.79■■□□□ 1.24
HDAC4-203ENST00000445704 TBC1D12O60347 775 aa22.79■■□□□ 1.24
HDAC4-203ENST00000445704 ALDH1A1P00352 501 aa22.79■■□□□ 1.24
HDAC4-203ENST00000445704 PPATQ06203 517 aa22.79■■□□□ 1.24
HDAC4-203ENST00000445704 CCL15Q16663 113 aa22.79■■□□□ 1.24
HDAC4-203ENST00000445704 SCYL3Q8IZE3 742 aa22.79■■□□□ 1.24
HDAC4-203ENST00000445704 CHGBP05060 677 aa22.78■■□□□ 1.24
HDAC4-203ENST00000445704 HDAC1Q13547 482 aaPredicted RBP22.78■■□□□ 1.24
HDAC4-203ENST00000445704 OTUD7AQ8TE49 926 aaPredicted RBP22.78■■□□□ 1.24
HDAC4-203ENST00000445704 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.78■■□□□ 1.24
HDAC4-203ENST00000445704 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.78■■□□□ 1.24
HDAC4-203ENST00000445704 SAP30BPQ9UHR5 308 aaKnown RBP22.78■■□□□ 1.24
HDAC4-203ENST00000445704 PALD1Q9ULE6 856 aa22.78■■□□□ 1.24
HDAC4-203ENST00000445704 GPR25O00155 361 aa22.77■■□□□ 1.24
HDAC4-203ENST00000445704 RRP1BQ14684 758 aaKnown RBP22.77■■□□□ 1.24
HDAC4-203ENST00000445704 ZNF296Q8WUU4 475 aaPredicted RBP22.77■■□□□ 1.24
HDAC4-203ENST00000445704 DDX60LQ5H9U9 1706 aaKnown RBP22.77■■□□□ 1.23
HDAC4-203ENST00000445704 MAGEB6P1A0A0J9YX57 407 aa22.76■■□□□ 1.23
HDAC4-203ENST00000445704 CTNND1O60716 968 aaKnown RBP22.76■■□□□ 1.23
HDAC4-203ENST00000445704 CETPP11597 493 aa22.76■■□□□ 1.23
HDAC4-203ENST00000445704 ADD2P35612 726 aa22.76■■□□□ 1.23
HDAC4-203ENST00000445704 SNAPC2Q13487 334 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms