RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 CSRNP1Q96S65 589 aa16.2■□□□□ 0.18
SMARCA4-204ENST00000444061 CD209Q9NNX6 404 aa16.2■□□□□ 0.18
SMARCA4-204ENST00000444061 INTS5Q6P9B9 1019 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-204ENST00000444061 COL23A1Q86Y22 540 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-204ENST00000444061 ERMNQ8TAM6 284 aa16.2■□□□□ 0.18
SMARCA4-204ENST00000444061 SNAP23O00161 211 aa16.2■□□□□ 0.18
SMARCA4-204ENST00000444061 ZBED4O75132 1171 aa16.2■□□□□ 0.18
SMARCA4-204ENST00000444061 SF3B3Q15393 1217 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-204ENST00000444061 MYO3BQ8WXR4 1341 aa16.19■□□□□ 0.18
SMARCA4-204ENST00000444061 ECE2O60344 883 aa16.19■□□□□ 0.18
SMARCA4-204ENST00000444061 VTI1AQ96AJ9 217 aa16.19■□□□□ 0.18
SMARCA4-204ENST00000444061 ANTXR1Q9H6X2 564 aa16.19■□□□□ 0.18
SMARCA4-204ENST00000444061 CKAP2LQ8IYA6 745 aa16.19■□□□□ 0.18
SMARCA4-204ENST00000444061 CPXCR1Q8N123 301 aa16.19■□□□□ 0.18
SMARCA4-204ENST00000444061 PTPDC1A2A3K4 754 aa16.19■□□□□ 0.18
SMARCA4-204ENST00000444061 HSPD1P10809 573 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-204ENST00000444061 MRE11P49959 708 aa16.19■□□□□ 0.18
SMARCA4-204ENST00000444061 DIXDC1Q155Q3 683 aa16.19■□□□□ 0.18
SMARCA4-204ENST00000444061 TSPY26PQ9H489 355 aa16.19■□□□□ 0.18
SMARCA4-204ENST00000444061 SNX14Q9Y5W7 946 aa16.19■□□□□ 0.18
SMARCA4-204ENST00000444061 TNNT3P45378 269 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-204ENST00000444061 MTFR1LQ9H019 292 aa16.18■□□□□ 0.18
SMARCA4-204ENST00000444061 GRIN3BO60391 1043 aa16.18■□□□□ 0.18
SMARCA4-204ENST00000444061 GPSM2P81274 684 aa16.18■□□□□ 0.18
SMARCA4-204ENST00000444061 GSPT1P15170 499 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-204ENST00000444061 PLA2G12BQ9BX93 195 aa16.18■□□□□ 0.18
SMARCA4-204ENST00000444061 ZMYM1Q5SVZ6 1142 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 PDILTQ8N807 584 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 CCDC17Q96LX7 622 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 TRIM5Q9C035 493 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 UBA5Q9GZZ9 404 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 E7EWF7 191 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 FGAP02671 866 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 ADD2P35612 726 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 SIRT2Q8IXJ6 389 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 CHURC1Q8WUH1 139 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 NTSR2O95665 410 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 FOXO4P98177 505 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 PPP2R5BQ15173 497 aa16.17■□□□□ 0.18
SMARCA4-204ENST00000444061 MCM4P33991 863 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 DYNLL1P63167 89 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 ICA1Q05084 483 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 PABPC4Q13310 644 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 CT47A1Q5JQC4 288 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 EPB41L2O43491 1005 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 GYS1P13807 737 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 KRT2P35908 639 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 FSIP1Q8NA03 581 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 TRIM75PA6NK02 468 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 PLSCR1O15162 318 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 IDEP14735 1019 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 AMPD3Q01432 767 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 ABCB5Q2M3G0 1257 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 CFAP100Q494V2 611 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 FCHSD1Q86WN1 690 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 CNNM3Q8NE01 707 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 PYM1Q9BRP8 204 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 OSBPL3Q9H4L5 887 aa16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 V9GY48 417 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-204ENST00000444061 MECOMQ03112 1051 aa16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 ARMC9Q7Z3E5 817 aa16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 LZTS2Q9BRK4 669 aa16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 DHX36Q9H2U1 1008 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 ATP6V0A2Q9Y487 856 aa16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 PDIA6Q15084 440 aa16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 GLT8D2Q9H1C3 349 aa16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 KIF20AO95235 890 aa16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 ZSCAN22P10073 491 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 DPEP1P16444 411 aa16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 PANK2Q9BZ23 570 aa16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 DEXIO95424 95 aa16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 SERPINC1P01008 464 aa16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 SNX21Q969T3 373 aa16.15■□□□□ 0.18
SMARCA4-204ENST00000444061 MAP3K11Q16584 847 aa16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 NSMFQ6X4W1 530 aa16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 SWAP70Q9UH65 585 aa16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 SERPINB13Q9UIV8 391 aa16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 KDM6AO15550 1401 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 PCP11498 1178 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 HSPA4P34932 840 aa16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 SYCP1Q15431 976 aa16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 TBC1D10BQ4KMP7 808 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 BCL9O00512 1426 aa16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 GADL1Q6ZQY3 521 aa16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 MYL10Q9BUA6 226 aa16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 PDCL3Q9H2J4 239 aa16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 SEC24BO95487 1268 aa16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 MCAMP43121 646 aa16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 RABL6Q3YEC7 729 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 PIH1D3Q9NQM4 214 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-204ENST00000444061 LIG1P18858 919 aa16.13■□□□□ 0.17
SMARCA4-204ENST00000444061 STYK1Q6J9G0 422 aa16.13■□□□□ 0.17
SMARCA4-204ENST00000444061 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.13■□□□□ 0.17
SMARCA4-204ENST00000444061 KIFC2Q96AC6 838 aa16.13■□□□□ 0.17
SMARCA4-204ENST00000444061 MAP2P11137 1827 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-204ENST00000444061 PTH1RQ03431 593 aa16.13■□□□□ 0.17
SMARCA4-204ENST00000444061 OTUD7BQ6GQQ9 843 aa16.13■□□□□ 0.17
SMARCA4-204ENST00000444061 ARID3AQ99856 593 aa16.13■□□□□ 0.17
SMARCA4-204ENST00000444061 PALD1Q9ULE6 856 aa16.13■□□□□ 0.17
SMARCA4-204ENST00000444061 CRKP46108 304 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms