RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CCNJLQ8IV13 435 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 AGBL5Q8NDL9 886 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 SPATA32Q96LK8 384 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 TCF12Q99081 682 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 YIPF2Q9BWQ6 316 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 GSX1Q9H4S2 264 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 NOP58Q9Y2X3 529 aaKnown RBP6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 CARMIL2Q6F5E8 1435 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 A0A1W2PP55 124 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 TPD52L2O43399 206 aaKnown RBP6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 RAB6AP20340 208 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 MAP7Q14244 749 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 POU4F3Q15319 338 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 DYMQ7RTS9 669 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 BCL7CQ8WUZ0 217 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 TRIM56Q9BRZ2 755 aaKnown RBP6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 CLEC4MQ9H2X3 399 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 CCDC87Q9NVE4 849 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 NRDCO43847 1150 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 IRX3P78415 501 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 EHHADHQ08426 723 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 AKAP4Q5JQC9 854 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 GORABQ5T7V8 394 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 LCE4AQ5TA78 99 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 ZNF574Q6ZN55 896 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 GJD3Q8N144 294 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 SDR16C5Q8N3Y7 309 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 SH3BP1Q9Y3L3 701 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 NESP48681 1621 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 FANCIQ9NVI1 1328 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 TMEM88BA6NKF7 163 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 SMARCA5O60264 1052 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 EIF4EBP3O60516 100 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 CYP11A1P05108 521 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 CALRP27797 417 aaKnown RBP6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 ASPAP45381 313 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 USP5P45974 858 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 CYP27A1Q02318 531 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 CCDC96Q2M329 555 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 OGFOD3Q6PK18 319 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 MKL1Q969V6 931 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 ZNF830Q96NB3 372 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 IGSF5Q9NSI5 407 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 HMGB1P1B2RPK0 211 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 MARCH6O60337 910 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 FAM13AO94988 1023 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 BNIP3Q12983 259 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 RALBP1Q15311 655 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 ZNF792Q3KQV3 632 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 ZNF648Q5T619 568 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 PHLDB3Q6NSJ2 640 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 EGFL6Q8IUX8 553 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 GALNT12Q8IXK2 581 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 LGR6Q9HBX8 967 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 RAD18Q9NS91 495 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 SLC52A1Q9NWF4 448 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 PPP1R9AQ9ULJ8 1098 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 SLC5A6Q9Y289 635 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 SUGT1Q9Y2Z0 365 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 ANP32AP39687 249 aaKnown RBP6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 FKBP4Q02790 459 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 HSP90AA2PQ14568 343 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 NBPF9Q3BBW0 867 aa6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 OTUD6BQ8N6M0 293 aa6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 MTA3Q9BTC8 594 aa6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 LIN7BQ9HAP6 207 aa6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 AP4E1Q9UPM8 1137 aa6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 NCAPD3P42695 1498 aa6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 THOC2Q8NI27 1593 aaKnown RBP6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 AOC2O75106 756 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 B3GALT4O96024 378 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 APPP05067 770 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 ZNF124Q15973 351 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 USPL1Q5W0Q7 1092 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 APBB1IPQ7Z5R6 666 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 TSPAN18Q96SJ8 248 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 WDR18Q9BV38 432 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 UBA5Q9GZZ9 404 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 TMEM51Q9NW97 253 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 SERPINA10Q9UK55 444 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 DAGLAQ9Y4D2 1042 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 U3KQE9 123 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 PLCL1Q15111 1095 aa6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 KIAA0319Q5VV43 1072 aa6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 CCDC97Q96F63 343 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 WDR89Q96FK6 387 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 CORO1BQ9BR76 489 aa6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 ZNF576Q9H609 170 aa6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 ANO2Q9NQ90 1003 aa6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 SYNGAP1Q96PV0 1343 aa6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 GOLIM4O00461 696 aa6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 TCERG1O14776 1098 aaKnown RBP6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 SF3B2Q13435 895 aaKnown RBP6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 HP1BP3Q5SSJ5 553 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 CC2D1BQ5T0F9 858 aaKnown RBP6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 STK11IPQ8N1F8 1099 aa6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 PLD6Q8N2A8 252 aaKnown RBP6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 GLIS3Q8NEA6 775 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms