RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 ZSCAN29Q8IWY8 852 aaPredicted RBP25.41■■□□□ 1.66
VIL1-204ENST00000440053 PIH1D3Q9NQM4 214 aaKnown RBP25.41■■□□□ 1.66
VIL1-204ENST00000440053 GSTO1P78417 241 aa25.4■■□□□ 1.66
VIL1-204ENST00000440053 AACSQ86V21 672 aa25.4■■□□□ 1.66
VIL1-204ENST00000440053 ERO1BQ86YB8 467 aa25.4■■□□□ 1.66
VIL1-204ENST00000440053 RHPN1Q8TCX5 695 aa25.4■■□□□ 1.66
VIL1-204ENST00000440053 ZNF512BQ96KM6 892 aaPredicted RBP25.4■■□□□ 1.66
VIL1-204ENST00000440053 RFX7Q2KHR2 1363 aa25.4■■□□□ 1.66
VIL1-204ENST00000440053 CCL15-CCL14A0A0B4J2E2 113 aa25.4■■□□□ 1.66
VIL1-204ENST00000440053 IRF6O14896 467 aa25.4■■□□□ 1.66
VIL1-204ENST00000440053 CCL15Q16663 113 aa25.4■■□□□ 1.66
VIL1-204ENST00000440053 CTU1Q7Z7A3 348 aaKnown RBP25.4■■□□□ 1.66
VIL1-204ENST00000440053 GTF2A2P52657 109 aa25.39■■□□□ 1.65
VIL1-204ENST00000440053 CRHR2Q13324 411 aa25.39■■□□□ 1.65
VIL1-204ENST00000440053 PDE3AQ14432 1141 aa25.39■■□□□ 1.65
VIL1-204ENST00000440053 ADGRA1Q86SQ6 560 aa25.39■■□□□ 1.65
VIL1-204ENST00000440053 ERC1Q8IUD2 1116 aa25.39■■□□□ 1.65
VIL1-204ENST00000440053 FKTNO75072 461 aa25.38■■□□□ 1.65
VIL1-204ENST00000440053 OTUD7BQ6GQQ9 843 aa25.38■■□□□ 1.65
VIL1-204ENST00000440053 NAA16Q6N069 864 aaPredicted RBP25.38■■□□□ 1.65
VIL1-204ENST00000440053 SH3RF3Q8TEJ3 882 aaPredicted RBP25.38■■□□□ 1.65
VIL1-204ENST00000440053 ATRNL1Q5VV63 1379 aa25.38■■□□□ 1.65
VIL1-204ENST00000440053 PHF20L1A8MW92 1017 aa25.37■■□□□ 1.65
VIL1-204ENST00000440053 NOM1Q5C9Z4 860 aaKnown RBP25.37■■□□□ 1.65
VIL1-204ENST00000440053 FAM43AQ8N2R8 423 aa25.37■■□□□ 1.65
VIL1-204ENST00000440053 ANTXR1Q9H6X2 564 aa25.37■■□□□ 1.65
VIL1-204ENST00000440053 AATFQ9NY61 560 aaKnown RBP eCLIP25.37■■□□□ 1.65
VIL1-204ENST00000440053 AK9Q5TCS8 1911 aa25.37■■□□□ 1.65
VIL1-204ENST00000440053 HSP90AB4PQ58FF6 505 aa25.36■■□□□ 1.65
VIL1-204ENST00000440053 PPIL2Q13356 520 aa25.35■■□□□ 1.65
VIL1-204ENST00000440053 TEX11Q8IYF3 940 aa25.35■■□□□ 1.65
VIL1-204ENST00000440053 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.35■■□□□ 1.65
VIL1-204ENST00000440053 FAM196BA6NMK8 535 aa25.34■■□□□ 1.65
VIL1-204ENST00000440053 HMMRO75330 724 aa25.34■■□□□ 1.65
VIL1-204ENST00000440053 MAP3K10Q02779 954 aa25.34■■□□□ 1.65
VIL1-204ENST00000440053 PPATQ06203 517 aa25.34■■□□□ 1.65
VIL1-204ENST00000440053 YTHDC1Q96MU7 727 aaKnown RBP25.34■■□□□ 1.65
VIL1-204ENST00000440053 KIF1BPQ96EK5 621 aa25.34■■□□□ 1.65
VIL1-204ENST00000440053 BTBD19C9JJ37 291 aa25.33■■□□□ 1.65
VIL1-204ENST00000440053 CETPP11597 493 aa25.33■■□□□ 1.65
VIL1-204ENST00000440053 DYNLL1P63167 89 aaKnown RBP25.33■■□□□ 1.65
VIL1-204ENST00000440053 SNAPC2Q13487 334 aa25.33■■□□□ 1.65
VIL1-204ENST00000440053 CHMP4BQ9H444 224 aaKnown RBP25.33■■□□□ 1.65
VIL1-204ENST00000440053 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.33■■□□□ 1.65
VIL1-204ENST00000440053 LAMB1P07942 1786 aa25.32■■□□□ 1.64
VIL1-204ENST00000440053 IDH1O75874 414 aaKnown RBP25.32■■□□□ 1.64
VIL1-204ENST00000440053 CYP7A1P22680 504 aa25.32■■□□□ 1.64
VIL1-204ENST00000440053 CAP1Q01518 475 aa25.32■■□□□ 1.64
VIL1-204ENST00000440053 TAF1CQ15572 869 aaPredicted RBP25.32■■□□□ 1.64
VIL1-204ENST00000440053 NOL9Q5SY16 702 aaKnown RBP25.32■■□□□ 1.64
VIL1-204ENST00000440053 CLASRPQ8N2M8 674 aaKnown RBP25.32■■□□□ 1.64
VIL1-204ENST00000440053 OSBPL5Q9H0X9 879 aaPredicted RBP25.32■■□□□ 1.64
VIL1-204ENST00000440053 NPM3O75607 178 aaKnown RBP25.31■■□□□ 1.64
VIL1-204ENST00000440053 PPP4CP60510 307 aa25.31■■□□□ 1.64
VIL1-204ENST00000440053 TGFBRAP1Q8WUH2 860 aa25.31■■□□□ 1.64
VIL1-204ENST00000440053 NOL10Q9BSC4 688 aaKnown RBP25.31■■□□□ 1.64
VIL1-204ENST00000440053 BAG3O95817 575 aa25.3■■□□□ 1.64
VIL1-204ENST00000440053 MAP4K4O95819 1239 aaPredicted RBP25.3■■□□□ 1.64
VIL1-204ENST00000440053 MAPKAPK5Q8IW41 473 aa25.3■■□□□ 1.64
VIL1-204ENST00000440053 CD99L2Q8TCZ2 262 aa25.3■■□□□ 1.64
VIL1-204ENST00000440053 MYO5AQ9Y4I1 1855 aaKnown RBP25.3■■□□□ 1.64
VIL1-204ENST00000440053 RAB11FIP3O75154 756 aa25.29■■□□□ 1.64
VIL1-204ENST00000440053 CCDC84Q86UT8 332 aaPredicted RBP25.29■■□□□ 1.64
VIL1-204ENST00000440053 SCYL3Q8IZE3 742 aa25.29■■□□□ 1.64
VIL1-204ENST00000440053 MIGA1Q8NAN2 632 aa25.29■■□□□ 1.64
VIL1-204ENST00000440053 HPS5Q9UPZ3 1129 aa25.29■■□□□ 1.64
VIL1-204ENST00000440053 KCNH4Q9UQ05 1017 aa25.29■■□□□ 1.64
VIL1-204ENST00000440053 ZHX2Q9Y6X8 837 aa25.29■■□□□ 1.64
VIL1-204ENST00000440053 IFIT2P09913 472 aaKnown RBP25.28■■□□□ 1.64
VIL1-204ENST00000440053 PTPRAP18433 802 aa25.28■■□□□ 1.64
VIL1-204ENST00000440053 MOGSQ13724 837 aa25.28■■□□□ 1.64
VIL1-204ENST00000440053 RRP1BQ14684 758 aaKnown RBP25.28■■□□□ 1.64
VIL1-204ENST00000440053 MAGEB6Q8N7X4 407 aa25.28■■□□□ 1.64
VIL1-204ENST00000440053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.28■■□□□ 1.64
VIL1-204ENST00000440053 ZFYVE28Q9HCC9 887 aa25.28■■□□□ 1.64
VIL1-204ENST00000440053 SMARCA5O60264 1052 aaPredicted RBP25.28■■□□□ 1.64
VIL1-204ENST00000440053 SP3Q02447 781 aa25.28■■□□□ 1.64
VIL1-204ENST00000440053 TRIM17Q9Y577 477 aa25.28■■□□□ 1.64
VIL1-204ENST00000440053 TBC1D12O60347 775 aa25.27■■□□□ 1.64
VIL1-204ENST00000440053 PKN2Q16513 984 aaKnown RBP25.27■■□□□ 1.64
VIL1-204ENST00000440053 EDC3Q96F86 508 aaKnown RBP25.27■■□□□ 1.64
VIL1-204ENST00000440053 PICK1Q9NRD5 415 aa25.27■■□□□ 1.64
VIL1-204ENST00000440053 DOCK2Q92608 1830 aa25.26■■□□□ 1.63
VIL1-204ENST00000440053 CTNND1O60716 968 aaKnown RBP25.26■■□□□ 1.63
VIL1-204ENST00000440053 OTOP1Q7RTM1 612 aa25.26■■□□□ 1.63
VIL1-204ENST00000440053 PLCG2P16885 1265 aa25.25■■□□□ 1.63
VIL1-204ENST00000440053 SLC4A8Q2Y0W8 1093 aa25.25■■□□□ 1.63
VIL1-204ENST00000440053 DNAJC2Q99543 621 aaKnown RBP25.25■■□□□ 1.63
VIL1-204ENST00000440053 SAP30BPQ9UHR5 308 aaKnown RBP25.25■■□□□ 1.63
VIL1-204ENST00000440053 PALD1Q9ULE6 856 aa25.25■■□□□ 1.63
VIL1-204ENST00000440053 AFG3L2Q9Y4W6 797 aa25.25■■□□□ 1.63
VIL1-204ENST00000440053 FLT1P17948 1338 aa25.24■■□□□ 1.63
VIL1-204ENST00000440053 MAP3K12Q12852 859 aa25.24■■□□□ 1.63
VIL1-204ENST00000440053 FBXO46Q6PJ61 603 aaPredicted RBP25.24■■□□□ 1.63
VIL1-204ENST00000440053 ERO1AQ96HE7 468 aa25.24■■□□□ 1.63
VIL1-204ENST00000440053 PDHXO00330 501 aa25.23■■□□□ 1.63
VIL1-204ENST00000440053 GOLIM4O00461 696 aa25.23■■□□□ 1.63
VIL1-204ENST00000440053 CXCL11O14625 94 aa25.23■■□□□ 1.63
VIL1-204ENST00000440053 ECM2O94769 699 aaPredicted RBP25.23■■□□□ 1.63
VIL1-204ENST00000440053 SOX10P56693 466 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms