RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ANTXR1Q9H6X2 564 aa29.28■■■□□ 2.28
CPNE1-217ENST00000439669 AATFQ9NY61 560 aaKnown RBP eCLIP29.28■■■□□ 2.28
CPNE1-217ENST00000439669 TEX11Q8IYF3 940 aa29.27■■■□□ 2.28
CPNE1-217ENST00000439669 CNKSR2Q8WXI2 1034 aa29.27■■■□□ 2.28
CPNE1-217ENST00000439669 PCDHB15Q9Y5E8 787 aa29.27■■■□□ 2.28
CPNE1-217ENST00000439669 DOCK2Q92608 1830 aa29.27■■■□□ 2.28
CPNE1-217ENST00000439669 SMARCA5O60264 1052 aaPredicted RBP29.26■■■□□ 2.27
CPNE1-217ENST00000439669 ADGRA1Q86SQ6 560 aa29.26■■■□□ 2.27
CPNE1-217ENST00000439669 SH3RF3Q8TEJ3 882 aaPredicted RBP29.26■■■□□ 2.27
CPNE1-217ENST00000439669 ZKSCAN4Q969J2 545 aaPredicted RBP29.26■■■□□ 2.27
CPNE1-217ENST00000439669 OTUD5Q96G74 571 aa29.26■■■□□ 2.27
CPNE1-217ENST00000439669 DNAJC2Q99543 621 aaKnown RBP29.26■■■□□ 2.27
CPNE1-217ENST00000439669 SNCAIPQ9Y6H5 919 aa29.26■■■□□ 2.27
CPNE1-217ENST00000439669 PLCG2P16885 1265 aa29.25■■■□□ 2.27
CPNE1-217ENST00000439669 CYP7A1P22680 504 aa29.25■■■□□ 2.27
CPNE1-217ENST00000439669 MAP3K12Q12852 859 aa29.25■■■□□ 2.27
CPNE1-217ENST00000439669 SH3BP5LQ7L8J4 393 aa29.25■■■□□ 2.27
CPNE1-217ENST00000439669 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.25■■■□□ 2.27
CPNE1-217ENST00000439669 DCTPP1Q9H773 170 aa29.25■■■□□ 2.27
CPNE1-217ENST00000439669 DDTLA6NHG4 134 aaPredicted RBP29.24■■■□□ 2.27
CPNE1-217ENST00000439669 INPP5BP32019 993 aa29.24■■■□□ 2.27
CPNE1-217ENST00000439669 INHBEP58166 350 aa29.24■■■□□ 2.27
CPNE1-217ENST00000439669 TTF1Q15361 905 aaPredicted RBP29.24■■■□□ 2.27
CPNE1-217ENST00000439669 MAGEB6Q8N7X4 407 aa29.24■■■□□ 2.27
CPNE1-217ENST00000439669 SPDYE5A6NIY4 337 aa29.23■■■□□ 2.27
CPNE1-217ENST00000439669 NPM3O75607 178 aaKnown RBP29.23■■■□□ 2.27
CPNE1-217ENST00000439669 ATRNL1Q5VV63 1379 aa29.23■■■□□ 2.27
CPNE1-217ENST00000439669 TBC1D8O95759 1140 aa29.22■■■□□ 2.27
CPNE1-217ENST00000439669 PPP4CP60510 307 aa29.22■■■□□ 2.27
CPNE1-217ENST00000439669 IFFO2Q5TF58 517 aa29.22■■■□□ 2.27
CPNE1-217ENST00000439669 ERO1BQ86YB8 467 aa29.22■■■□□ 2.27
CPNE1-217ENST00000439669 OSBPL5Q9H0X9 879 aaPredicted RBP29.22■■■□□ 2.27
CPNE1-217ENST00000439669 CASP8AP2Q9UKL3 1982 aa29.21■■■□□ 2.27
CPNE1-217ENST00000439669 GOLIM4O00461 696 aa29.21■■■□□ 2.27
CPNE1-217ENST00000439669 IFNL1Q8IU54 200 aa29.21■■■□□ 2.27
CPNE1-217ENST00000439669 BOLA2Q9H3K6 86 aa29.21■■■□□ 2.27
CPNE1-217ENST00000439669 ZNF112Q9UJU3 913 aa29.21■■■□□ 2.27
CPNE1-217ENST00000439669 ALDH1A1P00352 501 aa29.2■■■□□ 2.26
CPNE1-217ENST00000439669 LAMB1P07942 1786 aa29.2■■■□□ 2.26
CPNE1-217ENST00000439669 IGF2BP3O00425 579 aaKnown RBP eCLIP29.19■■■□□ 2.26
CPNE1-217ENST00000439669 ATP5JP18859 108 aa29.19■■■□□ 2.26
CPNE1-217ENST00000439669 DYNLL1P63167 89 aaKnown RBP29.19■■■□□ 2.26
CPNE1-217ENST00000439669 MIGA1Q8NAN2 632 aa29.19■■■□□ 2.26
CPNE1-217ENST00000439669 TGFBRAP1Q8WUH2 860 aa29.19■■■□□ 2.26
CPNE1-217ENST00000439669 COL2A1P02458 1487 aaPredicted RBP29.18■■■□□ 2.26
CPNE1-217ENST00000439669 GTF2A2P52657 109 aa29.18■■■□□ 2.26
CPNE1-217ENST00000439669 OTUD7BQ6GQQ9 843 aa29.18■■■□□ 2.26
CPNE1-217ENST00000439669 MAPKAPK5Q8IW41 473 aa29.18■■■□□ 2.26
CPNE1-217ENST00000439669 EDC3Q96F86 508 aaKnown RBP29.18■■■□□ 2.26
CPNE1-217ENST00000439669 CCL15-CCL14A0A0B4J2E2 113 aa29.17■■■□□ 2.26
CPNE1-217ENST00000439669 SLURP2P0DP57 97 aa29.17■■■□□ 2.26
CPNE1-217ENST00000439669 CCL15Q16663 113 aa29.17■■■□□ 2.26
CPNE1-217ENST00000439669 NOL9Q5SY16 702 aaKnown RBP29.17■■■□□ 2.26
CPNE1-217ENST00000439669 TMED8Q6PL24 325 aaPredicted RBP29.17■■■□□ 2.26
CPNE1-217ENST00000439669 MS4A4AQ96JQ5 239 aa29.17■■■□□ 2.26
CPNE1-217ENST00000439669 PAG1Q9NWQ8 432 aa29.17■■■□□ 2.26
CPNE1-217ENST00000439669 PPIL2Q13356 520 aa29.16■■■□□ 2.26
CPNE1-217ENST00000439669 CERS3Q8IU89 383 aa29.16■■■□□ 2.26
CPNE1-217ENST00000439669 HAUS7Q99871 368 aa29.16■■■□□ 2.26
CPNE1-217ENST00000439669 FLT1P17948 1338 aa29.16■■■□□ 2.26
CPNE1-217ENST00000439669 TESPA1A2RU30 521 aaPredicted RBP29.15■■■□□ 2.26
CPNE1-217ENST00000439669 PHF20L1A8MW92 1017 aa29.15■■■□□ 2.26
CPNE1-217ENST00000439669 IRF6O14896 467 aa29.15■■■□□ 2.26
CPNE1-217ENST00000439669 PDE6AP16499 860 aa29.15■■■□□ 2.26
CPNE1-217ENST00000439669 PPATQ06203 517 aa29.15■■■□□ 2.26
CPNE1-217ENST00000439669 SLC9C2Q5TAH2 1124 aa29.15■■■□□ 2.26
CPNE1-217ENST00000439669 BRI3BPQ8WY22 251 aa29.15■■■□□ 2.26
CPNE1-217ENST00000439669 GPATCH3Q96I76 525 aa29.15■■■□□ 2.26
CPNE1-217ENST00000439669 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.15■■■□□ 2.269e-8■■■■■ 116.8
CPNE1-217ENST00000439669 FAM196BA6NMK8 535 aa29.14■■■□□ 2.26
CPNE1-217ENST00000439669 MAP3K10Q02779 954 aa29.14■■■□□ 2.26
CPNE1-217ENST00000439669 SNAPC2Q13487 334 aa29.14■■■□□ 2.26
CPNE1-217ENST00000439669 PTPN18Q99952 460 aa29.14■■■□□ 2.26
CPNE1-217ENST00000439669 PICK1Q9NRD5 415 aa29.14■■■□□ 2.26
CPNE1-217ENST00000439669 ECHDC1Q9NTX5 307 aa29.14■■■□□ 2.26
CPNE1-217ENST00000439669 SCYL3Q8IZE3 742 aa29.13■■■□□ 2.25
CPNE1-217ENST00000439669 CFHR5Q9BXR6 569 aa29.13■■■□□ 2.25
CPNE1-217ENST00000439669 DHX36Q9H2U1 1008 aaKnown RBP29.13■■■□□ 2.25
CPNE1-217ENST00000439669 CDK5RAP2Q96SN8 1893 aa29.12■■■□□ 2.25
CPNE1-217ENST00000439669 GPR25O00155 361 aa29.12■■■□□ 2.25
CPNE1-217ENST00000439669 TBC1D12O60347 775 aa29.12■■■□□ 2.25
CPNE1-217ENST00000439669 CETPP11597 493 aa29.12■■■□□ 2.25
CPNE1-217ENST00000439669 USP5P45974 858 aa29.12■■■□□ 2.25
CPNE1-217ENST00000439669 R3HDMLQ9H3Y0 253 aa29.12■■■□□ 2.25
CPNE1-217ENST00000439669 SAP30BPQ9UHR5 308 aaKnown RBP29.12■■■□□ 2.25
CPNE1-217ENST00000439669 FOCADQ5VW36 1801 aa29.11■■■□□ 2.25
CPNE1-217ENST00000439669 CAPN15O75808 1086 aa29.11■■■□□ 2.25
CPNE1-217ENST00000439669 DGKZQ13574 1117 aa29.11■■■□□ 2.25
CPNE1-217ENST00000439669 ZNF296Q8WUU4 475 aaPredicted RBP29.11■■■□□ 2.25
CPNE1-217ENST00000439669 PI4KBQ9UBF8 816 aa29.11■■■□□ 2.25
CPNE1-217ENST00000439669 ZNF532Q9HCE3 1301 aa29.11■■■□□ 2.25
CPNE1-217ENST00000439669 MAGEB6P1A0A0J9YX57 407 aa29.1■■■□□ 2.25
CPNE1-217ENST00000439669 CTNND1O60716 968 aaKnown RBP29.1■■■□□ 2.25
CPNE1-217ENST00000439669 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.1■■■□□ 2.256e-7■■■■■ 30.8
CPNE1-217ENST00000439669 PALD1Q9ULE6 856 aa29.1■■■□□ 2.25
CPNE1-217ENST00000439669 SUPT16HQ9Y5B9 1047 aaKnown RBP29.1■■■□□ 2.25
CPNE1-217ENST00000439669 CRHR2Q13324 411 aa29.09■■■□□ 2.25
CPNE1-217ENST00000439669 AAMPQ13685 434 aa29.09■■■□□ 2.25
CPNE1-217ENST00000439669 TSHZ3Q63HK5 1081 aa29.09■■■□□ 2.25
CPNE1-217ENST00000439669 ZBTB47Q9UFB7 747 aaPredicted RBP29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms