RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 PRR5LQ6MZQ0 368 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 GPATCH11Q8N954 259 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 FAM89AQ96GI7 184 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 AGBL1Q96MI9 1066 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 NLRP3Q96P20 1036 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 DNAJC2Q99543 621 aaKnown RBP7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 CYLDQ9NQC7 956 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 CEP126Q9P2H0 1117 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 SUPT16HQ9Y5B9 1047 aaKnown RBP7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 ABCC4O15439 1325 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 PXDNLA1KZ92 1463 aa7.67□□□□□ -1.18
ECHDC1-208ENST00000436638 H7C1W4 665 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 GRM8O00222 908 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 IRS4O14654 1257 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 PDE8AO60658 829 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 GNAI3P08754 354 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 UBTFL1P0CB47 393 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 MFAP1P55081 439 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 RELBQ01201 579 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 INTS3Q68E01 1043 aaKnown RBP7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 Q6ZVU0 165 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 UBE3BQ7Z3V4 1068 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 TMEM57Q8N5G2 664 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 PANK1Q8TE04 598 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 ZNF775Q96BV0 537 aaPredicted RBP7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 BRIP1Q9BX63 1249 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 DDX19BQ9UMR2 479 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 TNNQ9UQP3 1299 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 EP400Q96L91 3159 aa7.66□□□□□ -1.18
ECHDC1-208ENST00000436638 H0YIN7 160 aa7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 ADD1P35611 737 aaKnown RBP7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 TGFB2P61812 414 aa7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 SEMA3FQ13275 785 aa7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 MVPQ14764 893 aaKnown RBP7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 ANKRD36CQ5JPF3 1778 aa7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 SLC10A5Q5PT55 438 aa7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 C2CD5Q86YS7 1000 aa7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 JARID2Q92833 1246 aaPredicted RBP7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 RPGRQ92834 1020 aaKnown RBP7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 SECISBP2LQ93073 1101 aaKnown RBP7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 ZNF622Q969S3 477 aaKnown RBP eCLIP7.65□□□□□ -1.181e-7■□□□□ 9.8
ECHDC1-208ENST00000436638 CDHR2Q9BYE9 1310 aa7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 CHMP3Q9Y3E7 222 aa7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 PCDHB11Q9Y5F2 797 aa7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 CD2APQ9Y5K6 639 aa7.65□□□□□ -1.18
ECHDC1-208ENST00000436638 LILRA1O75019 489 aa7.64□□□□□ -1.19
ECHDC1-208ENST00000436638 HCLS1P14317 486 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-208ENST00000436638 HSP90AB4PQ58FF6 505 aa7.64□□□□□ -1.19
ECHDC1-208ENST00000436638 RBM17Q96I25 401 aaKnown RBP7.64□□□□□ -1.19
ECHDC1-208ENST00000436638 FHDC1Q9C0D6 1143 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-208ENST00000436638 TMX4Q9H1E5 349 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-208ENST00000436638 ZNF395Q9H8N7 513 aaPredicted RBP7.64□□□□□ -1.19
ECHDC1-208ENST00000436638 AFDNP55196 1824 aaKnown RBP7.64□□□□□ -1.19
ECHDC1-208ENST00000436638 C10orf71Q711Q0 1435 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 ABCC12Q96J65 1359 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 SOBPA7XYQ1 873 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 MAN1A2O60476 641 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 GNAI2P04899 355 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 NBPF7P0C2Y1 421 aaPredicted RBP7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 RLBP1P12271 317 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 ALDH1B1P30837 517 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 CTSWP56202 376 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 SLFNL1Q499Z3 407 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 CCDC152Q4G0S7 254 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 DDX46Q7L014 1031 aaKnown RBP7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 SYNE4Q8N205 404 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 MASTLQ96GX5 879 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 SUCLG2Q96I99 432 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 MEIS3Q99687 375 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 PLA2G12BQ9BX93 195 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 USP44Q9H0E7 712 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 COL24A1Q17RW2 1714 aa7.63□□□□□ -1.19
ECHDC1-208ENST00000436638 UTYO14607 1347 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 A0A0G2JLW4 131 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 ANKRD18BA2A2Z9 1011 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 ADH1AP07327 375 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 NPR1P16066 1061 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 DPEP1P16444 411 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 CHRNA5P30532 468 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 SF3B3Q15393 1217 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 CCDC57Q2TAC2 916 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 C20orf194Q5TEA3 1177 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 STYK1Q6J9G0 422 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 CNKSR1Q969H4 720 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 CCDC85AQ96PX6 553 aaPredicted RBP7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 CDC5LQ99459 802 aaKnown RBP7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 TRAIPQ9BWF2 469 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 PIM2Q9P1W9 311 aa7.62□□□□□ -1.19
ECHDC1-208ENST00000436638 RIC1Q4ADV7 1423 aa7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 ZBTB7BO15156 539 aaPredicted RBP7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 SRGNP10124 158 aa7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 IGHMBP2P38935 993 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 CASP7P55210 303 aa7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 IFIT5Q13325 482 aaKnown RBP7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 LMBR1LQ6UX01 489 aa7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 RNF135Q8IUD6 432 aa7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 ANKRD18AQ8IVF6 992 aa7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 EXOC8Q8IYI6 725 aa7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 TTLL6Q8N841 843 aa7.61□□□□□ -1.19
ECHDC1-208ENST00000436638 TTLL11Q8NHH1 800 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms