RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 GRAMD1CQ8IYS0 662 aa17.15■□□□□ 0.34
TMCO3-202ENST00000434316 UBN2Q6ZU65 1347 aa17.15■□□□□ 0.34
TMCO3-202ENST00000434316 CDKL5O76039 1030 aa17.15■□□□□ 0.34
TMCO3-202ENST00000434316 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
TMCO3-202ENST00000434316 MDM2Q00987 491 aaPredicted RBP17.15■□□□□ 0.34
TMCO3-202ENST00000434316 KARSQ15046 597 aaKnown RBP17.15■□□□□ 0.34
TMCO3-202ENST00000434316 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
TMCO3-202ENST00000434316 MPHOSPH8Q99549 860 aa17.15■□□□□ 0.34
TMCO3-202ENST00000434316 NFE2L3Q9Y4A8 694 aa17.15■□□□□ 0.34
TMCO3-202ENST00000434316 ADD2P35612 726 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 MAP3K9P80192 1104 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 PPP2R3AQ06190 1150 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 SLC9C2Q5TAH2 1124 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 CC2D1AQ6P1N0 951 aaPredicted RBP17.14■□□□□ 0.33
TMCO3-202ENST00000434316 SYNE4Q8N205 404 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 NEK11Q8NG66 645 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 CCDC34Q96HJ3 373 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 TRERF1Q96PN7 1200 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 C1orf167Q5SNV9 1468 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 ECM29Q5VYK3 1845 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 GOLGA8AA7E2F4 631 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 ZBTB43O43298 467 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 HNRNPH2P55795 449 aaKnown RBP17.14■□□□□ 0.33
TMCO3-202ENST00000434316 FAM193AP78312 1265 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 IRX5P78411 483 aaPredicted RBP17.14■□□□□ 0.33
TMCO3-202ENST00000434316 SLC26A6Q9BXS9 759 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.14■□□□□ 0.33
TMCO3-202ENST00000434316 CALCOCO1Q9P1Z2 691 aa17.14■□□□□ 0.33
TMCO3-202ENST00000434316 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
TMCO3-202ENST00000434316 ST5P78524 1137 aa17.13■□□□□ 0.33
TMCO3-202ENST00000434316 TRIM29Q14134 588 aa17.13■□□□□ 0.33
TMCO3-202ENST00000434316 MTF1Q14872 753 aa17.13■□□□□ 0.33
TMCO3-202ENST00000434316 CPLX2Q6PUV4 134 aaKnown RBP17.13■□□□□ 0.33
TMCO3-202ENST00000434316 CREBRFQ8IUR6 639 aa17.13■□□□□ 0.33
TMCO3-202ENST00000434316 KIFC2Q96AC6 838 aa17.13■□□□□ 0.33
TMCO3-202ENST00000434316 PIH1D3Q9NQM4 214 aaKnown RBP17.13■□□□□ 0.33
TMCO3-202ENST00000434316 TMEM51Q9NW97 253 aa17.13■□□□□ 0.33
TMCO3-202ENST00000434316 MRFAP1Q9Y605 127 aa17.13■□□□□ 0.33
TMCO3-202ENST00000434316 MYH7P12883 1935 aa17.13■□□□□ 0.33
TMCO3-202ENST00000434316 GUCY1A2P33402 732 aa17.13■□□□□ 0.33
TMCO3-202ENST00000434316 KRI1Q8N9T8 703 aaKnown RBP17.13■□□□□ 0.33
TMCO3-202ENST00000434316 IGDCC4Q8TDY8 1250 aa17.13■□□□□ 0.33
TMCO3-202ENST00000434316 MED15Q96RN5 788 aa17.13■□□□□ 0.33
TMCO3-202ENST00000434316 ISCA1Q9BUE6 129 aa17.13■□□□□ 0.33
TMCO3-202ENST00000434316 IRX2Q9BZI1 471 aaPredicted RBP17.13■□□□□ 0.33
TMCO3-202ENST00000434316 BTBD18B2RXH4 712 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 IDH1O75874 414 aaKnown RBP17.12■□□□□ 0.33
TMCO3-202ENST00000434316 OAS2P29728 719 aaKnown RBP17.12■□□□□ 0.33
TMCO3-202ENST00000434316 PROSER2Q86WR7 435 aaPredicted RBP17.12■□□□□ 0.33
TMCO3-202ENST00000434316 DHX58Q96C10 678 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 LY9Q9HBG7 655 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 SERTAD1Q9UHV2 236 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 COL18A1P39060 1754 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 ALS2Q96Q42 1657 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 POLR2DO15514 142 aaKnown RBP17.12■□□□□ 0.33
TMCO3-202ENST00000434316 TOB1P50616 345 aaPredicted RBP17.12■□□□□ 0.33
TMCO3-202ENST00000434316 POSTNQ15063 836 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 SPECC1LQ69YQ0 1117 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 UBXN6Q9BZV1 441 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 SEC31BQ9NQW1 1179 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 SAMSN1Q9NSI8 373 aaKnown RBP17.12■□□□□ 0.33
TMCO3-202ENST00000434316 KCNJ14Q9UNX9 436 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 ZNF18P17022 549 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 TMEM67Q5HYA8 995 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 METTL24Q5JXM2 366 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 RSRC2Q7L4I2 434 aaKnown RBP17.12■□□□□ 0.33
TMCO3-202ENST00000434316 PARD6BQ9BYG5 372 aa17.12■□□□□ 0.33
TMCO3-202ENST00000434316 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.12■□□□□ 0.33
TMCO3-202ENST00000434316 MRPL44Q9H9J2 332 aaKnown RBP17.12■□□□□ 0.33
TMCO3-202ENST00000434316 STX10O60499 249 aa17.11■□□□□ 0.33
TMCO3-202ENST00000434316 TPM1P09493 284 aa17.11■□□□□ 0.33
TMCO3-202ENST00000434316 ZSWIM4Q9H7M6 989 aa17.11■□□□□ 0.33
TMCO3-202ENST00000434316 MYO5AQ9Y4I1 1855 aaKnown RBP17.11■□□□□ 0.33
TMCO3-202ENST00000434316 RIC1Q4ADV7 1423 aa17.11■□□□□ 0.33
TMCO3-202ENST00000434316 A0A0U1RQJ8 604 aa17.11■□□□□ 0.33
TMCO3-202ENST00000434316 MYO1BO43795 1136 aa17.11■□□□□ 0.33
TMCO3-202ENST00000434316 IFIT5Q13325 482 aaKnown RBP17.11■□□□□ 0.33
TMCO3-202ENST00000434316 GPR161Q8N6U8 529 aaKnown RBP17.11■□□□□ 0.33
TMCO3-202ENST00000434316 ATRIPQ8WXE1 791 aa17.11■□□□□ 0.33
TMCO3-202ENST00000434316 SMARCE1Q969G3 411 aa17.11■□□□□ 0.33
TMCO3-202ENST00000434316 PKD1L3Q7Z443 1732 aa17.11■□□□□ 0.33
TMCO3-202ENST00000434316 ZNF532Q9HCE3 1301 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 TCIRG1Q13488 830 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 NOSTRINQ8IVI9 506 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 WWC3Q9ULE0 1092 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 TACC3Q9Y6A5 838 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 CCDC82Q8N4S0 544 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 ZBTB9Q96C00 473 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 AKAP11Q9UKA4 1901 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 ATP2B1P20020 1258 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 GYS2P54840 703 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 CTDSPL2Q05D32 466 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 SSRP1Q08945 709 aaKnown RBP17.1■□□□□ 0.33
TMCO3-202ENST00000434316 SMC1AQ14683 1233 aaKnown RBP17.1■□□□□ 0.33
TMCO3-202ENST00000434316 USP49Q70CQ1 688 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 RGS22Q8NE09 1264 aa17.1■□□□□ 0.33
TMCO3-202ENST00000434316 TEX13AQ9BXU3 409 aaPredicted RBP17.1■□□□□ 0.33
TMCO3-202ENST00000434316 FBXO2Q9UK22 296 aaPredicted RBP17.1■□□□□ 0.33
TMCO3-202ENST00000434316 SOWAHDA6NJG2 315 aa17.09■□□□□ 0.33
TMCO3-202ENST00000434316 DIS3L2Q8IYB7 885 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms