RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 BNIP3LO60238 219 aa8.74□□□□□ -1.01
GTF2A1-202ENST00000434192 PTCD1O75127 700 aaKnown RBP8.74□□□□□ -1.01
GTF2A1-202ENST00000434192 ZKSCAN2Q63HK3 967 aa8.74□□□□□ -1.01
GTF2A1-202ENST00000434192 FTSJ3Q8IY81 847 aaKnown RBP8.74□□□□□ -1.01
GTF2A1-202ENST00000434192 C1orf216Q8TAB5 229 aa8.74□□□□□ -1.01
GTF2A1-202ENST00000434192 SMARCC1Q92922 1105 aaPredicted RBP8.74□□□□□ -1.01
GTF2A1-202ENST00000434192 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
GTF2A1-202ENST00000434192 ZCCHC2Q9C0B9 1178 aaKnown RBP8.74□□□□□ -1.01
GTF2A1-202ENST00000434192 ASAP1Q9ULH1 1129 aa8.74□□□□□ -1.01
GTF2A1-202ENST00000434192 PTPRCP08575 1304 aa8.74□□□□□ -1.01
GTF2A1-202ENST00000434192 A0A1W2PNR3 127 aa8.73□□□□□ -1.01
GTF2A1-202ENST00000434192 TCERG1O14776 1098 aaKnown RBP8.73□□□□□ -1.01
GTF2A1-202ENST00000434192 PLIN1O60240 522 aa8.73□□□□□ -1.01
GTF2A1-202ENST00000434192 BCRP11274 1271 aa8.73□□□□□ -1.01
GTF2A1-202ENST00000434192 EIF2S2P20042 333 aaKnown RBP8.73□□□□□ -1.01
GTF2A1-202ENST00000434192 EPHA4P54764 986 aa8.73□□□□□ -1.01
GTF2A1-202ENST00000434192 SLC9A9Q8IVB4 645 aa8.73□□□□□ -1.01
GTF2A1-202ENST00000434192 STK32BQ9NY57 414 aa8.73□□□□□ -1.01
GTF2A1-202ENST00000434192 CHPF2Q9P2E5 772 aa8.73□□□□□ -1.01
GTF2A1-202ENST00000434192 DBF4Q9UBU7 674 aaPredicted RBP8.73□□□□□ -1.01
GTF2A1-202ENST00000434192 ATXN7L1Q9ULK2 861 aaPredicted RBP8.73□□□□□ -1.01
GTF2A1-202ENST00000434192 KIAA1551Q9HCM1 1747 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 PRAMEF22A3QJZ6 481 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 PALM3A6NDB9 673 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 FGFR3P22607 806 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 TXLNAP40222 546 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 MAP2K3P46734 347 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 IRX6P78412 446 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 KCNMA1Q12791 1236 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 PDE3AQ14432 1141 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 SLC15A2Q16348 729 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 ATF7IPQ6VMQ6 1270 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 BICDL1Q6ZP65 573 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 NEDD1Q8NHV4 660 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 ZDHHC1Q8WTX9 485 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 TEX13AQ9BXU3 409 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 API5Q9BZZ5 524 aaKnown RBP8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 ENAMQ9NRM1 1142 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 NOB1Q9ULX3 412 aaKnown RBP8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 ZNF232Q9UNY5 417 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 MAFBQ9Y5Q3 323 aaPredicted RBP8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 NUP98P52948 1817 aa8.72□□□□□ -1.01
GTF2A1-202ENST00000434192 SFI1A8K8P3 1242 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 STARD3NLO95772 234 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 BMP4P12644 408 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 TRIM27P14373 513 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 RASA1P20936 1047 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 FOXK2Q01167 660 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 CTBSQ01459 385 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 FIGNL1Q6PIW4 674 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 NLRP8Q86W28 1048 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 LARGE2Q8N3Y3 721 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 ARHGAP45Q92619 1136 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 KLRG1Q96E93 195 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 OXCT2Q9BYC2 517 aaPredicted RBP8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 DDX21Q9NR30 783 aaKnown RBP eCLIP8.71□□□□□ -1.025e-8■□□□□ 8.1
GTF2A1-202ENST00000434192 NDFIP2Q9NV92 336 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 HYPKQ9NX55 129 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 ZDHHC3Q9NYG2 299 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 PCDHGC4Q9Y5F7 938 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 GTF3C3Q9Y5Q9 886 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 GJA3Q9Y6H8 435 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 ABCC4O15439 1325 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 LAMB2P55268 1798 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 DLEC1Q9Y238 1755 aa8.71□□□□□ -1.02
GTF2A1-202ENST00000434192 ARFGEF1Q9Y6D6 1849 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 CACNA1SQ13698 1873 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 SRCAPQ6ZRS2 3230 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 LOC102724428A0A0B4J2F2 783 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 DCDC2BA2VCK2 349 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 C2CD2LO14523 706 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 ATXN7O15265 892 aaPredicted RBP8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 NOS2P35228 1153 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 IRS1P35568 1242 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 GSK3AP49840 483 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 SIK1P57059 783 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 FKBP5Q13451 457 aaPredicted RBP8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 ZNF827Q17R98 1081 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 SH3PXD2AQ5TCZ1 1133 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 DNAJC10Q8IXB1 793 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 DZIP1LQ8IYY4 767 aaKnown RBP8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 ZIC5Q96T25 663 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 PPP1R12CQ9BZL4 782 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 SPON1Q9HCB6 807 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 LRRC4BQ9NT99 713 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 RBM19Q9Y4C8 960 aaKnown RBP8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 ATP10DQ9P241 1426 aa8.7□□□□□ -1.02
GTF2A1-202ENST00000434192 RNF225M0QZC1 329 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-202ENST00000434192 DDX58O95786 925 aaKnown RBP8.69□□□□□ -1.02
GTF2A1-202ENST00000434192 MYL6BP14649 208 aa8.69□□□□□ -1.02
GTF2A1-202ENST00000434192 RASSF7Q02833 373 aa8.69□□□□□ -1.02
GTF2A1-202ENST00000434192 TEAD4Q15561 434 aa8.69□□□□□ -1.02
GTF2A1-202ENST00000434192 C20orf194Q5TEA3 1177 aa8.69□□□□□ -1.02
GTF2A1-202ENST00000434192 ERICH6BQ5W0A0 696 aa8.69□□□□□ -1.02
GTF2A1-202ENST00000434192 TSEN2Q8NCE0 465 aaKnown RBP8.69□□□□□ -1.02
GTF2A1-202ENST00000434192 CRBNQ96SW2 442 aa8.69□□□□□ -1.02
GTF2A1-202ENST00000434192 TSPAN10Q9H1Z9 355 aaPredicted RBP8.69□□□□□ -1.02
GTF2A1-202ENST00000434192 USP16Q9Y5T5 823 aa8.69□□□□□ -1.02
GTF2A1-202ENST00000434192 MYH3P11055 1940 aa8.68□□□□□ -1.02
GTF2A1-202ENST00000434192 SERTM1A2A2V5 107 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms