RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ZAP70P43403 619 aa13.09□□□□□ -0.31
PTCH1-208ENST00000430669 GALNT17Q6IS24 598 aa13.09□□□□□ -0.31
PTCH1-208ENST00000430669 SYCP3Q8IZU3 236 aa13.09□□□□□ -0.31
PTCH1-208ENST00000430669 TBC1D5Q92609 795 aa13.09□□□□□ -0.31
PTCH1-208ENST00000430669 EAF2Q96CJ1 260 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-208ENST00000430669 GOPCQ9HD26 462 aa13.09□□□□□ -0.31
PTCH1-208ENST00000430669 SMARCC2Q8TAQ2 1214 aa13.09□□□□□ -0.31
PTCH1-208ENST00000430669 LSG1Q9H089 658 aaKnown RBP13.09□□□□□ -0.31
PTCH1-208ENST00000430669 ATP2B4P23634 1241 aa13.09□□□□□ -0.31
PTCH1-208ENST00000430669 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.09□□□□□ -0.31
PTCH1-208ENST00000430669 CLEC4GQ6UXB4 293 aa13.08□□□□□ -0.31
PTCH1-208ENST00000430669 N4BP3O15049 544 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 CYLC1P35663 651 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-208ENST00000430669 KRT79Q5XKE5 535 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 DPP8Q6V1X1 898 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-208ENST00000430669 LEMD3Q9Y2U8 911 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 TRIM14Q14142 442 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 AATFQ9NY61 560 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTCH1-208ENST00000430669 XRCC6P12956 609 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTCH1-208ENST00000430669 UBE4AQ14139 1066 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 RAB11FIP4Q86YS3 637 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.32
PTCH1-208ENST00000430669 TSGA10Q9BZW7 698 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 UBA5Q9GZZ9 404 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 TTC12Q9H892 705 aaPredicted RBP13.08□□□□□ -0.32
PTCH1-208ENST00000430669 CEP135Q66GS9 1140 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 IMPACTQ9P2X3 320 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 PFKFB2O60825 505 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 HSPD1P10809 573 aaKnown RBP13.08□□□□□ -0.32
PTCH1-208ENST00000430669 TMCO3Q6UWJ1 677 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 MCM7P33993 719 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 MTX1Q13505 466 aa13.08□□□□□ -0.32
PTCH1-208ENST00000430669 BRD1O95696 1058 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 SLC4A8Q2Y0W8 1093 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 MAP4K1Q92918 833 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 A0A0D9SFI3 127 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 PAFAH1B1P43034 410 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 ZMYM1Q5SVZ6 1142 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 CKAP4Q07065 602 aaKnown RBP13.07□□□□□ -0.32
PTCH1-208ENST00000430669 AOPEPQ8N6M6 819 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 TTLL12Q14166 644 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-208ENST00000430669 ZKSCAN5Q9Y2L8 839 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 CNNM4Q6P4Q7 775 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 CLSTN2Q9H4D0 955 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 XDHP47989 1333 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 DDAH1O94760 285 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 PROSER3Q2NL68 480 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 KIF4BQ2VIQ3 1234 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 NLRP10Q86W26 655 aa13.07□□□□□ -0.32
PTCH1-208ENST00000430669 LEO1Q8WVC0 666 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-208ENST00000430669 AFMP43652 599 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 FAM196AQ6ZSG2 479 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 TAF5LO75529 589 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 CLCN1P35523 988 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 F8W031 263 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-208ENST00000430669 PPARAQ07869 468 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 ME3Q16798 604 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 HAUS3Q68CZ6 603 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 C16orf45Q96MC5 204 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-208ENST00000430669 PDE6AP16499 860 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 AXDND1Q5T1B0 1012 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-208ENST00000430669 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTCH1-208ENST00000430669 IDEP14735 1019 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 NF2P35240 595 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 ASIC1P78348 528 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 DNAJC25Q9H1X3 360 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 MYH7P12883 1935 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 CD163L1Q9NR16 1453 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 TAOK3Q9H2K8 898 aa13.06□□□□□ -0.32
PTCH1-208ENST00000430669 PRPHP41219 470 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 UNC5CLQ8IV45 518 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 CNGA4Q8IV77 575 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 ZSCAN10Q96SZ4 725 aaPredicted RBP13.05□□□□□ -0.32
PTCH1-208ENST00000430669 GBP2P32456 591 aaPredicted RBP13.05□□□□□ -0.32
PTCH1-208ENST00000430669 KRT83P78385 493 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 ZNF772Q68DY9 489 aaPredicted RBP13.05□□□□□ -0.32
PTCH1-208ENST00000430669 CCDC65Q8IXS2 484 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 CRACR2AQ9BSW2 395 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 CCDC88AQ3V6T2 1871 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 KRT25Q7Z3Z0 450 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 IFNL3Q8IZI9 196 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 IQCDQ96DY2 449 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 PLVAPQ9BX97 442 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
PTCH1-208ENST00000430669 DBNLQ9UJU6 430 aaKnown RBP13.05□□□□□ -0.32
PTCH1-208ENST00000430669 CCDC175P0C221 793 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 MYL5Q02045 173 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 DHX58Q96C10 678 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 ASAP1Q9ULH1 1129 aa13.05□□□□□ -0.32
PTCH1-208ENST00000430669 CCDC174Q6PII3 467 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 PNMA2Q9UL42 364 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 KCNH3Q9ULD8 1083 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 CCNT1O60563 726 aaKnown RBP13.04□□□□□ -0.32
PTCH1-208ENST00000430669 TDRD12Q587J7 1177 aaKnown RBP13.04□□□□□ -0.32
PTCH1-208ENST00000430669 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
PTCH1-208ENST00000430669 GREM2Q9H772 168 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 CDHR2Q9BYE9 1310 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 SV2BQ7L1I2 683 aa13.04□□□□□ -0.32
PTCH1-208ENST00000430669 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.04□□□□□ -0.326e-10■■■■■ 141.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms