RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ZNF765Q7L2R6 523 aa8.89□□□□□ -0.99
HMGB3P5-201ENST00000428894 PRPF40AO75400 957 aaKnown RBP8.88□□□□□ -0.99
HMGB3P5-201ENST00000428894 COL19A1Q14993 1142 aa8.88□□□□□ -0.99
HMGB3P5-201ENST00000428894 MSMPQ1L6U9 139 aa8.88□□□□□ -0.99
HMGB3P5-201ENST00000428894 OGFOD3Q6PK18 319 aa8.88□□□□□ -0.99
HMGB3P5-201ENST00000428894 ANKRD24Q8TF21 1146 aa8.88□□□□□ -0.99
HMGB3P5-201ENST00000428894 LRRC4CQ9HCJ2 640 aa8.88□□□□□ -0.99
HMGB3P5-201ENST00000428894 EIF4BP23588 611 aaKnown RBP8.87□□□□□ -0.99
HMGB3P5-201ENST00000428894 GNA15P30679 374 aa8.87□□□□□ -0.99
HMGB3P5-201ENST00000428894 CDK5R2Q13319 367 aa8.87□□□□□ -0.99
HMGB3P5-201ENST00000428894 LRRC14Q15048 493 aa8.87□□□□□ -0.99
HMGB3P5-201ENST00000428894 EAPPQ56P03 285 aaPredicted RBP8.87□□□□□ -0.99
HMGB3P5-201ENST00000428894 CACNA2D2Q9NY47 1150 aa8.87□□□□□ -0.99
HMGB3P5-201ENST00000428894 PCOLCE2Q9UKZ9 415 aa8.87□□□□□ -0.99
HMGB3P5-201ENST00000428894 OAS3Q9Y6K5 1087 aaKnown RBP8.87□□□□□ -0.99
HMGB3P5-201ENST00000428894 TRIM37O94972 964 aa8.86□□□□□ -0.99
HMGB3P5-201ENST00000428894 CELA3AP09093 270 aa8.86□□□□□ -0.99
HMGB3P5-201ENST00000428894 ERVK-24P63145 666 aa8.86□□□□□ -0.99
HMGB3P5-201ENST00000428894 FGD1P98174 961 aa8.86□□□□□ -0.99
HMGB3P5-201ENST00000428894 LLGL2Q6P1M3 1020 aa8.86□□□□□ -0.99
HMGB3P5-201ENST00000428894 DUSP9Q99956 384 aaKnown RBP8.86□□□□□ -0.99
HMGB3P5-201ENST00000428894 SSU72Q9NP77 194 aaKnown RBP8.86□□□□□ -0.99
HMGB3P5-201ENST00000428894 RNF19AQ9NV58 838 aa8.86□□□□□ -0.99
HMGB3P5-201ENST00000428894 TTF2Q9UNY4 1162 aaKnown RBP8.86□□□□□ -0.99
HMGB3P5-201ENST00000428894 CSADQ9Y600 493 aa8.86□□□□□ -0.99
HMGB3P5-201ENST00000428894 RB1CC1Q8TDY2 1594 aa8.86□□□□□ -0.99
HMGB3P5-201ENST00000428894 NEFMP07197 916 aa8.85□□□□□ -0.99
HMGB3P5-201ENST00000428894 CYP27C1Q4G0S4 372 aa8.85□□□□□ -0.99
HMGB3P5-201ENST00000428894 RASIP1Q5U651 963 aa8.85□□□□□ -0.99
HMGB3P5-201ENST00000428894 RNF214Q8ND24 703 aa8.85□□□□□ -0.99
HMGB3P5-201ENST00000428894 ISL2Q96A47 359 aa8.85□□□□□ -0.99
HMGB3P5-201ENST00000428894 DCDC2CA8MYV0 355 aa8.84□□□□□ -0.99
HMGB3P5-201ENST00000428894 FAM87AP0C7U9 286 aa8.84□□□□□ -0.99
HMGB3P5-201ENST00000428894 PCNX4Q63HM2 1172 aa8.84□□□□□ -0.99
HMGB3P5-201ENST00000428894 SV2BQ7L1I2 683 aa8.84□□□□□ -0.99
HMGB3P5-201ENST00000428894 ZC3H7BQ9UGR2 993 aaKnown RBP8.84□□□□□ -0.99
HMGB3P5-201ENST00000428894 PCDHA4Q9UN74 947 aa8.84□□□□□ -0.99
HMGB3P5-201ENST00000428894 ANGEL1Q9UNK9 670 aaKnown RBP8.84□□□□□ -0.99
HMGB3P5-201ENST00000428894 CYP8B1Q9UNU6 501 aa8.84□□□□□ -0.99
HMGB3P5-201ENST00000428894 AK5Q9Y6K8 562 aa8.84□□□□□ -0.99
HMGB3P5-201ENST00000428894 PPM1JQ5JR12 505 aa8.83□□□□□ -1
HMGB3P5-201ENST00000428894 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.83□□□□□ -1
HMGB3P5-201ENST00000428894 PSMG3-AS1Q96PY0 264 aa8.83□□□□□ -1
HMGB3P5-201ENST00000428894 BSDC1Q9NW68 430 aaPredicted RBP8.83□□□□□ -1
HMGB3P5-201ENST00000428894 CCDC39Q9UFE4 941 aa8.83□□□□□ -1
HMGB3P5-201ENST00000428894 PRNPP04156 253 aa8.82□□□□□ -1
HMGB3P5-201ENST00000428894 IRAK1P51617 712 aa8.82□□□□□ -1
HMGB3P5-201ENST00000428894 C12orf40Q86WS4 652 aa8.82□□□□□ -1
HMGB3P5-201ENST00000428894 PICK1Q9NRD5 415 aa8.82□□□□□ -1
HMGB3P5-201ENST00000428894 SCARA3Q6AZY7 606 aa8.81□□□□□ -1
HMGB3P5-201ENST00000428894 DNAJC14Q6Y2X3 702 aaPredicted RBP8.81□□□□□ -1
HMGB3P5-201ENST00000428894 VSIG10LQ86VR7 867 aa8.81□□□□□ -1
HMGB3P5-201ENST00000428894 NPAS4Q8IUM7 802 aa8.81□□□□□ -1
HMGB3P5-201ENST00000428894 LEFTY1O75610 366 aa8.8□□□□□ -1
HMGB3P5-201ENST00000428894 MCTP1Q6DN14 999 aa8.8□□□□□ -1
HMGB3P5-201ENST00000428894 KRTAP4-8Q9BYQ9 185 aa8.8□□□□□ -1
HMGB3P5-201ENST00000428894 PARP2Q9UGN5 583 aa8.8□□□□□ -1
HMGB3P5-201ENST00000428894 PTPN11Q06124 597 aaPredicted RBP8.79□□□□□ -1
HMGB3P5-201ENST00000428894 CCDC85BQ15834 202 aaPredicted RBP8.79□□□□□ -1
HMGB3P5-201ENST00000428894 TTBK2Q6IQ55 1244 aa8.79□□□□□ -1
HMGB3P5-201ENST00000428894 ELMO3Q96BJ8 720 aa8.79□□□□□ -1
HMGB3P5-201ENST00000428894 DUSP23Q9BVJ7 150 aa8.79□□□□□ -1
HMGB3P5-201ENST00000428894 COL17A1Q9UMD9 1497 aaPredicted RBP8.78□□□□□ -1
HMGB3P5-201ENST00000428894 FANCGO15287 622 aa8.78□□□□□ -1
HMGB3P5-201ENST00000428894 RING1Q06587 406 aa8.78□□□□□ -1
HMGB3P5-201ENST00000428894 NFXL1Q6ZNB6 911 aa8.78□□□□□ -1
HMGB3P5-201ENST00000428894 TOP6BLQ8N6T0 577 aa8.78□□□□□ -1
HMGB3P5-201ENST00000428894 FBXL18Q96ME1 805 aa8.78□□□□□ -1
HMGB3P5-201ENST00000428894 GZF1Q9H116 711 aaPredicted RBP8.78□□□□□ -1
HMGB3P5-201ENST00000428894 NTF4P34130 210 aa8.77□□□□□ -1.01
HMGB3P5-201ENST00000428894 PSMD2Q13200 908 aa8.77□□□□□ -1.01
HMGB3P5-201ENST00000428894 INPP5AQ14642 412 aa8.77□□□□□ -1.01
HMGB3P5-201ENST00000428894 ZBTB37Q5TC79 503 aa8.77□□□□□ -1.01
HMGB3P5-201ENST00000428894 LRFN4Q6PJG9 635 aa8.77□□□□□ -1.01
HMGB3P5-201ENST00000428894 CDC37L1Q7L3B6 337 aa8.77□□□□□ -1.01
HMGB3P5-201ENST00000428894 UBE3DQ7Z6J8 389 aa8.77□□□□□ -1.01
HMGB3P5-201ENST00000428894 TP53INP2Q8IXH6 220 aa8.77□□□□□ -1.01
HMGB3P5-201ENST00000428894 ABI1Q8IZP0 508 aa8.77□□□□□ -1.01
HMGB3P5-201ENST00000428894 FAM181AQ8N9Y4 354 aa8.77□□□□□ -1.01
HMGB3P5-201ENST00000428894 FLCNQ8NFG4 579 aa8.77□□□□□ -1.01
HMGB3P5-201ENST00000428894 DAB2P98082 770 aa8.76□□□□□ -1.01
HMGB3P5-201ENST00000428894 XPCQ01831 940 aaPredicted RBP8.76□□□□□ -1.01
HMGB3P5-201ENST00000428894 GAL3ST3Q96A11 431 aa8.76□□□□□ -1.01
HMGB3P5-201ENST00000428894 TAL1P17542 331 aaPredicted RBP8.75□□□□□ -1.01
HMGB3P5-201ENST00000428894 LMNB1P20700 586 aa8.75□□□□□ -1.01
HMGB3P5-201ENST00000428894 MAP3K11Q16584 847 aa8.75□□□□□ -1.01
HMGB3P5-201ENST00000428894 MEI1Q5TIA1 1274 aa8.75□□□□□ -1.01
HMGB3P5-201ENST00000428894 ARHGAP27Q6ZUM4 889 aa8.75□□□□□ -1.01
HMGB3P5-201ENST00000428894 HDXQ7Z353 690 aa8.75□□□□□ -1.01
HMGB3P5-201ENST00000428894 PLD6Q8N2A8 252 aaKnown RBP8.75□□□□□ -1.01
HMGB3P5-201ENST00000428894 ZNF507Q8TCN5 953 aa8.75□□□□□ -1.01
HMGB3P5-201ENST00000428894 NETO1Q8TDF5 533 aa8.75□□□□□ -1.01
HMGB3P5-201ENST00000428894 PLPPR2Q96GM1 343 aa8.75□□□□□ -1.01
HMGB3P5-201ENST00000428894 ADGRE2Q9UHX3 823 aa8.75□□□□□ -1.01
HMGB3P5-201ENST00000428894 PRAMEF27A3QJZ7 478 aa8.74□□□□□ -1.01
HMGB3P5-201ENST00000428894 RPS26P62854 115 aaKnown RBP8.74□□□□□ -1.01
HMGB3P5-201ENST00000428894 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.74□□□□□ -1.01
HMGB3P5-201ENST00000428894 FBXO33Q7Z6M2 555 aa8.74□□□□□ -1.01
HMGB3P5-201ENST00000428894 KCT2Q8NC54 265 aa8.74□□□□□ -1.01
HMGB3P5-201ENST00000428894 FAM161BQ96MY7 647 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms