RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 SNX21Q969T3 373 aa12.89□□□□□ -0.35
CRIM1-204ENST00000428774 TTC14Q96N46 770 aa12.89□□□□□ -0.35
CRIM1-204ENST00000428774 MRIQ9BWK5 157 aa12.89□□□□□ -0.35
CRIM1-204ENST00000428774 TBC1D2Q9BYX2 928 aa12.89□□□□□ -0.35
CRIM1-204ENST00000428774 ZSWIM6Q9HCJ5 1215 aa12.89□□□□□ -0.35
CRIM1-204ENST00000428774 ATP8A2Q9NTI2 1148 aa12.89□□□□□ -0.35
CRIM1-204ENST00000428774 ARPP21Q9UBL0 812 aaPredicted RBP12.89□□□□□ -0.35
CRIM1-204ENST00000428774 SCN4AP35499 1836 aa12.89□□□□□ -0.35
CRIM1-204ENST00000428774 GLTPD2A6NH11 291 aa12.88□□□□□ -0.35
CRIM1-204ENST00000428774 POTECB2RU33 542 aa12.88□□□□□ -0.35
CRIM1-204ENST00000428774 WDHD1O75717 1129 aaPredicted RBP12.88□□□□□ -0.35
CRIM1-204ENST00000428774 USP17L8P0C7I0 530 aa12.88□□□□□ -0.35
CRIM1-204ENST00000428774 NEK4P51957 841 aa12.88□□□□□ -0.35
CRIM1-204ENST00000428774 TNIP1Q15025 636 aa12.88□□□□□ -0.35
CRIM1-204ENST00000428774 NKX2-3Q8TAU0 364 aa12.88□□□□□ -0.35
CRIM1-204ENST00000428774 NEK1Q96PY6 1258 aa12.88□□□□□ -0.35
CRIM1-204ENST00000428774 DDX4Q9NQI0 724 aaKnown RBP12.88□□□□□ -0.35
CRIM1-204ENST00000428774 ANAPC4Q9UJX5 808 aa12.88□□□□□ -0.35
CRIM1-204ENST00000428774 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
CRIM1-204ENST00000428774 COL2A1P02458 1487 aaPredicted RBP12.87□□□□□ -0.35
CRIM1-204ENST00000428774 USP17L12C9JPN9 530 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 USP17L21D6R901 530 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 RPS6KB1P23443 525 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 RPS12P25398 132 aaKnown RBP12.87□□□□□ -0.35
CRIM1-204ENST00000428774 YY1P25490 414 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 PSMA5P28066 241 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 RBM5P52756 815 aaKnown RBP eCLIP12.87□□□□□ -0.35
CRIM1-204ENST00000428774 SBK1Q52WX2 424 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 BLOC1S2Q6QNY1 142 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 RUFY3Q7L099 469 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 MB21D2Q8IYB1 491 aaPredicted RBP12.87□□□□□ -0.35
CRIM1-204ENST00000428774 GPC2Q8N158 579 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 STAG1Q8WVM7 1258 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 TCEANC2Q96MN5 208 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 IPO9Q96P70 1041 aaKnown RBP12.87□□□□□ -0.35
CRIM1-204ENST00000428774 NMRK2Q9NPI5 230 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 USP40Q9NVE5 1235 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 HDAC9Q9UKV0 1011 aa12.87□□□□□ -0.35
CRIM1-204ENST00000428774 GREB1LQ9C091 1923 aaPredicted RBP12.87□□□□□ -0.35
CRIM1-204ENST00000428774 SPDYE2BA6NHP3 402 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 MINDY4BA8MYZ0 360 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 ST18O60284 1047 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 EGFRP00533 1210 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 SPDYE6P0CI01 402 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 EPS15P42566 896 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 CACNB3P54284 484 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 AK2P54819 239 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 ANTXR2P58335 489 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 NFIAQ12857 509 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 PICALMQ13492 652 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 SLC4A8Q2Y0W8 1093 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 HSCBQ8IWL3 235 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 ZBED3Q96IU2 234 aaPredicted RBP12.86□□□□□ -0.35
CRIM1-204ENST00000428774 TDRD3Q9H7E2 651 aaKnown RBP12.86□□□□□ -0.35
CRIM1-204ENST00000428774 MCM9Q9NXL9 1143 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 SAP30BPQ9UHR5 308 aaKnown RBP12.86□□□□□ -0.35
CRIM1-204ENST00000428774 CYP46A1Q9Y6A2 500 aa12.86□□□□□ -0.35
CRIM1-204ENST00000428774 B4E1Z4 1266 aa12.85□□□□□ -0.35
CRIM1-204ENST00000428774 K7ELQ4 463 aaPredicted RBP12.85□□□□□ -0.35
CRIM1-204ENST00000428774 ZNF280AP59817 542 aaPredicted RBP12.85□□□□□ -0.35
CRIM1-204ENST00000428774 AKNAD1Q5T1N1 836 aa12.85□□□□□ -0.35
CRIM1-204ENST00000428774 C12orf60Q5U649 245 aa12.85□□□□□ -0.35
CRIM1-204ENST00000428774 NOL8Q76FK4 1167 aaKnown RBP12.85□□□□□ -0.35
CRIM1-204ENST00000428774 MICALL2Q8IY33 904 aa12.85□□□□□ -0.35
CRIM1-204ENST00000428774 STK11IPQ8N1F8 1099 aa12.85□□□□□ -0.35
CRIM1-204ENST00000428774 MTMR14Q8NCE2 650 aa12.85□□□□□ -0.35
CRIM1-204ENST00000428774 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
CRIM1-204ENST00000428774 PRMT6Q96LA8 375 aaPredicted RBP12.85□□□□□ -0.35
CRIM1-204ENST00000428774 OSBPL5Q9H0X9 879 aaPredicted RBP12.85□□□□□ -0.35
CRIM1-204ENST00000428774 RRAGCQ9HB90 399 aa12.85□□□□□ -0.35
CRIM1-204ENST00000428774 INCENPQ9NQS7 918 aa12.85□□□□□ -0.35
CRIM1-204ENST00000428774 PDRG1Q9NUG6 133 aa12.85□□□□□ -0.35
CRIM1-204ENST00000428774 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
CRIM1-204ENST00000428774 POLR2AP24928 1970 aaKnown RBP12.84□□□□□ -0.35
CRIM1-204ENST00000428774 SLC4A3P48751 1232 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 TOB2Q14106 344 aaPredicted RBP12.84□□□□□ -0.35
CRIM1-204ENST00000428774 BECN1Q14457 450 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 DLGAP5Q15398 846 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 CYB5R4Q7L1T6 521 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 SAMD7Q7Z3H4 446 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 RALYLQ86SE5 291 aaKnown RBP12.84□□□□□ -0.35
CRIM1-204ENST00000428774 OGFOD1Q8N543 542 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 TRPM4Q8TD43 1214 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 L3MBTL3Q96JM7 780 aaPredicted RBP12.84□□□□□ -0.35
CRIM1-204ENST00000428774 IDI2Q9BXS1 227 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 LRRC2Q9BYS8 371 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 MYOZ2Q9NPC6 264 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 GPRC5DQ9NZD1 345 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 FAM198AQ9UFP1 575 aa12.84□□□□□ -0.35
CRIM1-204ENST00000428774 CLRN2A0PK11 232 aa12.83□□□□□ -0.36
CRIM1-204ENST00000428774 LARGE1O95461 756 aa12.83□□□□□ -0.36
CRIM1-204ENST00000428774 HMGB1P09429 215 aaKnown RBP12.83□□□□□ -0.36
CRIM1-204ENST00000428774 FGRP09769 529 aa12.83□□□□□ -0.36
CRIM1-204ENST00000428774 POTEIP0CG38 1075 aa12.83□□□□□ -0.36
CRIM1-204ENST00000428774 POTEJP0CG39 1038 aa12.83□□□□□ -0.36
CRIM1-204ENST00000428774 PLCD1P51178 756 aa12.83□□□□□ -0.36
CRIM1-204ENST00000428774 EXOSC10Q01780 885 aaKnown RBP12.83□□□□□ -0.36
CRIM1-204ENST00000428774 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
CRIM1-204ENST00000428774 TBC1D10BQ4KMP7 808 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms