RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 SH3BP5LQ7L8J4 393 aa20.95■□□□□ 0.95
LMCD1-204ENST00000426878 WNK4Q96J92 1243 aa20.95■□□□□ 0.95
LMCD1-204ENST00000426878 HAUS7Q99871 368 aa20.95■□□□□ 0.95
LMCD1-204ENST00000426878 SAGE1Q9NXZ1 904 aa20.95■□□□□ 0.95
LMCD1-204ENST00000426878 AATFQ9NY61 560 aaKnown RBP eCLIP20.95■□□□□ 0.95
LMCD1-204ENST00000426878 ZNF112Q9UJU3 913 aa20.95■□□□□ 0.95
LMCD1-204ENST00000426878 INHBEP58166 350 aa20.95■□□□□ 0.94
LMCD1-204ENST00000426878 VGLL4Q14135 290 aa20.95■□□□□ 0.94
LMCD1-204ENST00000426878 TEX11Q8IYF3 940 aa20.95■□□□□ 0.94
LMCD1-204ENST00000426878 MAGEB6Q8N7X4 407 aa20.95■□□□□ 0.94
LMCD1-204ENST00000426878 BCL11AQ9H165 835 aa20.95■□□□□ 0.94
LMCD1-204ENST00000426878 BOLA2Q9H3K6 86 aa20.95■□□□□ 0.94
LMCD1-204ENST00000426878 CSADQ9Y600 493 aa20.95■□□□□ 0.94
LMCD1-204ENST00000426878 LAMB1P07942 1786 aa20.94■□□□□ 0.94
LMCD1-204ENST00000426878 GOLIM4O00461 696 aa20.94■□□□□ 0.94
LMCD1-204ENST00000426878 SREBF2Q12772 1141 aa20.94■□□□□ 0.94
LMCD1-204ENST00000426878 PICALMQ13492 652 aa20.94■□□□□ 0.94
LMCD1-204ENST00000426878 MIGA2Q7L4E1 593 aa20.94■□□□□ 0.94
LMCD1-204ENST00000426878 SH3RF3Q8TEJ3 882 aaPredicted RBP20.94■□□□□ 0.94
LMCD1-204ENST00000426878 WRNIP1Q96S55 665 aa20.94■□□□□ 0.94
LMCD1-204ENST00000426878 DNAJC2Q99543 621 aaKnown RBP20.94■□□□□ 0.94
LMCD1-204ENST00000426878 ECHDC1Q9NTX5 307 aa20.94■□□□□ 0.94
LMCD1-204ENST00000426878 DDTLA6NHG4 134 aaPredicted RBP20.93■□□□□ 0.94
LMCD1-204ENST00000426878 MANSC4A6NHS7 340 aaPredicted RBP20.93■□□□□ 0.94
LMCD1-204ENST00000426878 LBX1P52954 281 aa20.93■□□□□ 0.94
LMCD1-204ENST00000426878 ZSCAN29Q8IWY8 852 aaPredicted RBP20.93■□□□□ 0.94
LMCD1-204ENST00000426878 GCC1Q96CN9 775 aa20.93■□□□□ 0.94
LMCD1-204ENST00000426878 OSBPL5Q9H0X9 879 aaPredicted RBP20.93■□□□□ 0.94
LMCD1-204ENST00000426878 PAG1Q9NWQ8 432 aa20.93■□□□□ 0.94
LMCD1-204ENST00000426878 RNF186Q9NXI6 227 aa20.93■□□□□ 0.94
LMCD1-204ENST00000426878 GJA5P36382 358 aa20.92■□□□□ 0.94
LMCD1-204ENST00000426878 MKRN3Q13064 507 aaKnown RBP20.92■□□□□ 0.94
LMCD1-204ENST00000426878 EXOC6Q8TAG9 804 aa20.92■□□□□ 0.94
LMCD1-204ENST00000426878 OPTNQ96CV9 577 aa20.92■□□□□ 0.94
LMCD1-204ENST00000426878 GPATCH3Q96I76 525 aa20.92■□□□□ 0.94
LMCD1-204ENST00000426878 ELP3Q9H9T3 547 aa20.92■□□□□ 0.94
LMCD1-204ENST00000426878 TBC1D12O60347 775 aa20.91■□□□□ 0.94
LMCD1-204ENST00000426878 PDE6AP16499 860 aa20.91■□□□□ 0.94
LMCD1-204ENST00000426878 SLC9C2Q5TAH2 1124 aa20.91■□□□□ 0.94
LMCD1-204ENST00000426878 COL13A1Q5TAT6 717 aaPredicted RBP20.91■□□□□ 0.94
LMCD1-204ENST00000426878 ZKSCAN4Q969J2 545 aaPredicted RBP20.91■□□□□ 0.94
LMCD1-204ENST00000426878 SNCAIPQ9Y6H5 919 aa20.91■□□□□ 0.94
LMCD1-204ENST00000426878 SPDYE5A6NIY4 337 aa20.9■□□□□ 0.94
LMCD1-204ENST00000426878 PHF20L1A8MW92 1017 aa20.9■□□□□ 0.94
LMCD1-204ENST00000426878 ERO1BQ86YB8 467 aa20.9■□□□□ 0.94
LMCD1-204ENST00000426878 EDC3Q96F86 508 aaKnown RBP20.9■□□□□ 0.94
LMCD1-204ENST00000426878 DHX36Q9H2U1 1008 aaKnown RBP20.9■□□□□ 0.94
LMCD1-204ENST00000426878 FOCADQ5VW36 1801 aa20.9■□□□□ 0.94
LMCD1-204ENST00000426878 CDK5RAP2Q96SN8 1893 aa20.89■□□□□ 0.94
LMCD1-204ENST00000426878 TCRBV5S4A2TA0A5A2 114 aa20.89■□□□□ 0.94
LMCD1-204ENST00000426878 TESPA1A2RU30 521 aaPredicted RBP20.89■□□□□ 0.94
LMCD1-204ENST00000426878 TRPA1O75762 1119 aa20.89■□□□□ 0.94
LMCD1-204ENST00000426878 INPP5BP32019 993 aa20.89■□□□□ 0.94
LMCD1-204ENST00000426878 DYNLL1P63167 89 aaKnown RBP20.89■□□□□ 0.94
LMCD1-204ENST00000426878 NOL9Q5SY16 702 aaKnown RBP20.89■□□□□ 0.94
LMCD1-204ENST00000426878 TGFBRAP1Q8WUH2 860 aa20.89■□□□□ 0.94
LMCD1-204ENST00000426878 FLT1P17948 1338 aa20.89■□□□□ 0.93
LMCD1-204ENST00000426878 TTC41PQ6P2S7 1318 aa20.89■□□□□ 0.93
LMCD1-204ENST00000426878 MIGA1Q8NAN2 632 aa20.88■□□□□ 0.93
LMCD1-204ENST00000426878 RIOK1Q9BRS2 568 aaKnown RBP20.88■□□□□ 0.93
LMCD1-204ENST00000426878 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.88■□□□□ 0.93
LMCD1-204ENST00000426878 RWDD1Q9H446 243 aaPredicted RBP20.88■□□□□ 0.93
LMCD1-204ENST00000426878 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.88■□□□□ 0.93
LMCD1-204ENST00000426878 PPATQ06203 517 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 CNKSR2Q8WXI2 1034 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 MS4A4AQ96JQ5 239 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 CFHR5Q9BXR6 569 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 PI4KBQ9UBF8 816 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 TSKSQ9UJT2 592 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 ZNF532Q9HCE3 1301 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 ALDH1A1P00352 501 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 ADD2P35612 726 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 PPIL2Q13356 520 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 ANKRD45Q5TZF3 282 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 MAPKAPK5Q8IW41 473 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 SMC5Q8IY18 1101 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 OTUD5Q96G74 571 aa20.87■□□□□ 0.93
LMCD1-204ENST00000426878 HERC5Q9UII4 1024 aaKnown RBP20.87■□□□□ 0.93
LMCD1-204ENST00000426878 MAGEB6P1A0A0J9YX57 407 aa20.86■□□□□ 0.93
LMCD1-204ENST00000426878 GTF2A2P52657 109 aa20.86■□□□□ 0.93
LMCD1-204ENST00000426878 UBE3CQ15386 1083 aa20.86■□□□□ 0.93
LMCD1-204ENST00000426878 METTL16Q86W50 562 aaKnown RBP20.86■□□□□ 0.93
LMCD1-204ENST00000426878 IFNL1Q8IU54 200 aa20.86■□□□□ 0.93
LMCD1-204ENST00000426878 ZBTB47Q9UFB7 747 aaPredicted RBP20.86■□□□□ 0.93
LMCD1-204ENST00000426878 SALL3Q9BXA9 1300 aa20.85■□□□□ 0.93
LMCD1-204ENST00000426878 ERC2O15083 957 aa20.85■□□□□ 0.93
LMCD1-204ENST00000426878 CTNND1O60716 968 aaKnown RBP20.85■□□□□ 0.93
LMCD1-204ENST00000426878 ZSCAN25Q6NSZ9 544 aa20.85■□□□□ 0.93
LMCD1-204ENST00000426878 GLRX3O76003 335 aaKnown RBP20.84■□□□□ 0.93
LMCD1-204ENST00000426878 MX1P20591 662 aa20.84■□□□□ 0.93
LMCD1-204ENST00000426878 NOM1Q5C9Z4 860 aaKnown RBP20.84■□□□□ 0.93
LMCD1-204ENST00000426878 TSHZ3Q63HK5 1081 aa20.84■□□□□ 0.93
LMCD1-204ENST00000426878 FOXP4Q8IVH2 680 aaPredicted RBP20.84■□□□□ 0.93
LMCD1-204ENST00000426878 SCYL3Q8IZE3 742 aa20.84■□□□□ 0.93
LMCD1-204ENST00000426878 KBTBD3Q8NAB2 608 aa20.84■□□□□ 0.93
LMCD1-204ENST00000426878 PI4K2BQ8TCG2 481 aa20.84■□□□□ 0.93
LMCD1-204ENST00000426878 OTUD7AQ8TE49 926 aaPredicted RBP20.84■□□□□ 0.93
LMCD1-204ENST00000426878 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.84■□□□□ 0.93
LMCD1-204ENST00000426878 MYH7P12883 1935 aa20.84■□□□□ 0.93
LMCD1-204ENST00000426878 IGF2BP3O00425 579 aaKnown RBP eCLIP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms