RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 RGS22Q8NE09 1264 aa19.31■□□□□ 0.68
CMTM3-202ENST00000424011 WDR66Q8TBY9 1149 aa19.31■□□□□ 0.68
CMTM3-202ENST00000424011 HPS5Q9UPZ3 1129 aa19.31■□□□□ 0.68
CMTM3-202ENST00000424011 LETM1O95202 739 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-202ENST00000424011 ATP2B4P23634 1241 aa19.31■□□□□ 0.68
CMTM3-202ENST00000424011 HOXA10P31260 410 aaPredicted RBP19.31■□□□□ 0.68
CMTM3-202ENST00000424011 MECOMQ03112 1051 aa19.31■□□□□ 0.68
CMTM3-202ENST00000424011 PPARAQ07869 468 aa19.31■□□□□ 0.68
CMTM3-202ENST00000424011 RESTQ13127 1097 aa19.31■□□□□ 0.68
CMTM3-202ENST00000424011 CPLX2Q6PUV4 134 aaKnown RBP19.31■□□□□ 0.68
CMTM3-202ENST00000424011 TMC4Q7Z404 712 aa19.31■□□□□ 0.68
CMTM3-202ENST00000424011 IGDCC4Q8TDY8 1250 aa19.31■□□□□ 0.68
CMTM3-202ENST00000424011 TFIP11Q9UBB9 837 aaKnown RBP19.31■□□□□ 0.68
CMTM3-202ENST00000424011 CFAP45Q9UL16 551 aa19.31■□□□□ 0.68
CMTM3-202ENST00000424011 NOL7Q9UMY1 257 aaKnown RBP19.31■□□□□ 0.68
CMTM3-202ENST00000424011 MMP10P09238 476 aa19.3■□□□□ 0.68
CMTM3-202ENST00000424011 PCP11498 1178 aaKnown RBP19.3■□□□□ 0.68
CMTM3-202ENST00000424011 CHAF1AQ13111 956 aaPredicted RBP19.3■□□□□ 0.68
CMTM3-202ENST00000424011 TMEM67Q5HYA8 995 aa19.3■□□□□ 0.68
CMTM3-202ENST00000424011 PDLIM2Q96JY6 352 aa19.3■□□□□ 0.68
CMTM3-202ENST00000424011 CRAMP1Q96RY5 1269 aa19.3■□□□□ 0.68
CMTM3-202ENST00000424011 PRDM10Q9NQV6 1147 aa19.3■□□□□ 0.68
CMTM3-202ENST00000424011 ZSWIM5Q9P217 1185 aa19.3■□□□□ 0.68
CMTM3-202ENST00000424011 KDM4AO75164 1064 aa19.3■□□□□ 0.68
CMTM3-202ENST00000424011 METAP2P50579 478 aaKnown RBP eCLIP19.3■□□□□ 0.68
CMTM3-202ENST00000424011 NFXL1Q6ZNB6 911 aa19.3■□□□□ 0.68
CMTM3-202ENST00000424011 TMTC2Q8N394 836 aa19.3■□□□□ 0.68
CMTM3-202ENST00000424011 ERICH2A1L162 156 aa19.29■□□□□ 0.68
CMTM3-202ENST00000424011 IFIT3O14879 490 aaKnown RBP19.29■□□□□ 0.68
CMTM3-202ENST00000424011 ATL3Q6DD88 541 aa19.29■□□□□ 0.68
CMTM3-202ENST00000424011 TXNRD3Q86VQ6 643 aa19.29■□□□□ 0.68
CMTM3-202ENST00000424011 SDR42E1Q8WUS8 393 aa19.29■□□□□ 0.68
CMTM3-202ENST00000424011 PARP3Q9Y6F1 533 aa19.29■□□□□ 0.68
CMTM3-202ENST00000424011 CACNA1SQ13698 1873 aa19.29■□□□□ 0.68
CMTM3-202ENST00000424011 APOA5Q6Q788 366 aa19.29■□□□□ 0.68
CMTM3-202ENST00000424011 SYNE3Q6ZMZ3 975 aa19.29■□□□□ 0.68
CMTM3-202ENST00000424011 TDRD7Q8NHU6 1098 aaKnown RBP19.29■□□□□ 0.68
CMTM3-202ENST00000424011 CCDC94Q9BW85 323 aaPredicted RBP19.29■□□□□ 0.68
CMTM3-202ENST00000424011 CRNKL1Q9BZJ0 848 aaKnown RBP19.29■□□□□ 0.68
CMTM3-202ENST00000424011 LY9Q9HBG7 655 aa19.29■□□□□ 0.68
CMTM3-202ENST00000424011 ZBTB43O43298 467 aa19.28■□□□□ 0.68
CMTM3-202ENST00000424011 MSL1Q68DK7 614 aa19.28■□□□□ 0.68
CMTM3-202ENST00000424011 DZIP1Q86YF9 867 aaKnown RBP19.28■□□□□ 0.68
CMTM3-202ENST00000424011 SPATA32Q96LK8 384 aa19.28■□□□□ 0.68
CMTM3-202ENST00000424011 TOMM22Q9NS69 142 aa19.28■□□□□ 0.68
CMTM3-202ENST00000424011 CCDC69A6NI79 296 aa19.28■□□□□ 0.68
CMTM3-202ENST00000424011 PPFIA3O75145 1194 aa19.28■□□□□ 0.68
CMTM3-202ENST00000424011 ZSCAN20P17040 1043 aaPredicted RBP19.28■□□□□ 0.68
CMTM3-202ENST00000424011 FOSBP53539 338 aa19.28■□□□□ 0.68
CMTM3-202ENST00000424011 ILDR1Q86SU0 546 aaPredicted RBP19.28■□□□□ 0.68
CMTM3-202ENST00000424011 CCDC125Q86Z20 511 aa19.28■□□□□ 0.68
CMTM3-202ENST00000424011 ZNF384Q8TF68 577 aa19.28■□□□□ 0.68
CMTM3-202ENST00000424011 ESR2Q92731 530 aa19.28■□□□□ 0.68
CMTM3-202ENST00000424011 GGA1Q9UJY5 639 aa19.28■□□□□ 0.68
CMTM3-202ENST00000424011 SLC12A7Q9Y666 1083 aa19.28■□□□□ 0.68
CMTM3-202ENST00000424011 MINDY4BA8MYZ0 360 aa19.27■□□□□ 0.68
CMTM3-202ENST00000424011 FDPSP14324 419 aaKnown RBP19.27■□□□□ 0.68
CMTM3-202ENST00000424011 GSTO1P78417 241 aa19.27■□□□□ 0.68
CMTM3-202ENST00000424011 GPSM2P81274 684 aa19.27■□□□□ 0.68
CMTM3-202ENST00000424011 RRP12Q5JTH9 1297 aaKnown RBP19.27■□□□□ 0.68
CMTM3-202ENST00000424011 LEO1Q8WVC0 666 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-202ENST00000424011 ATP8A2Q9NTI2 1148 aa19.27■□□□□ 0.68
CMTM3-202ENST00000424011 ORC3Q9UBD5 711 aaPredicted RBP19.27■□□□□ 0.68
CMTM3-202ENST00000424011 NRXN2Q9P2S2 1712 aa19.27■□□□□ 0.67
CMTM3-202ENST00000424011 GOLGA6L4A6NEF3 574 aa19.26■□□□□ 0.67
CMTM3-202ENST00000424011 PRDX5P30044 214 aa19.26■□□□□ 0.67
CMTM3-202ENST00000424011 DYNLL1P63167 89 aaKnown RBP19.26■□□□□ 0.67
CMTM3-202ENST00000424011 UFL1O94874 794 aa19.26■□□□□ 0.67
CMTM3-202ENST00000424011 LDHBP07195 334 aaKnown RBP19.26■□□□□ 0.67
CMTM3-202ENST00000424011 BBXQ8WY36 941 aaPredicted RBP19.26■□□□□ 0.67
CMTM3-202ENST00000424011 C8orf76Q96K31 380 aa19.26■□□□□ 0.67
CMTM3-202ENST00000424011 LIG1P18858 919 aa19.25■□□□□ 0.67
CMTM3-202ENST00000424011 RCAN1P53805 252 aa19.25■□□□□ 0.67
CMTM3-202ENST00000424011 ZNF396Q96N95 335 aaPredicted RBP19.25■□□□□ 0.67
CMTM3-202ENST00000424011 ARID3AQ99856 593 aa19.25■□□□□ 0.67
CMTM3-202ENST00000424011 UBAC1Q9BSL1 405 aa19.25■□□□□ 0.67
CMTM3-202ENST00000424011 INCENPQ9NQS7 918 aa19.25■□□□□ 0.67
CMTM3-202ENST00000424011 WTAPQ15007 396 aa19.25■□□□□ 0.67
CMTM3-202ENST00000424011 NKX2-3Q8TAU0 364 aa19.25■□□□□ 0.67
CMTM3-202ENST00000424011 FUCA2Q9BTY2 467 aa19.25■□□□□ 0.67
CMTM3-202ENST00000424011 AATFQ9NY61 560 aaKnown RBP eCLIP19.25■□□□□ 0.67
CMTM3-202ENST00000424011 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.25■□□□□ 0.67
CMTM3-202ENST00000424011 GOLGA8AA7E2F4 631 aa19.24■□□□□ 0.67
CMTM3-202ENST00000424011 SLC3A2P08195 630 aaKnown RBP19.24■□□□□ 0.67
CMTM3-202ENST00000424011 CERS3Q8IU89 383 aa19.24■□□□□ 0.67
CMTM3-202ENST00000424011 MAST2Q6P0Q8 1798 aa19.24■□□□□ 0.67
CMTM3-202ENST00000424011 MYH13Q9UKX3 1938 aa19.24■□□□□ 0.67
CMTM3-202ENST00000424011 SASS6Q6UVJ0 657 aa19.24■□□□□ 0.67
CMTM3-202ENST00000424011 MICU3Q86XE3 530 aa19.24■□□□□ 0.67
CMTM3-202ENST00000424011 FBXO18Q8NFZ0 1043 aa19.24■□□□□ 0.67
CMTM3-202ENST00000424011 TACC3Q9Y6A5 838 aa19.24■□□□□ 0.67
CMTM3-202ENST00000424011 NID2Q14112 1375 aa19.24■□□□□ 0.67
CMTM3-202ENST00000424011 LDHCP07864 332 aa19.23■□□□□ 0.67
CMTM3-202ENST00000424011 PDE6BP35913 854 aa19.23■□□□□ 0.67
CMTM3-202ENST00000424011 PGBD1Q96JS3 809 aa19.23■□□□□ 0.67
CMTM3-202ENST00000424011 ARPP21Q9UBL0 812 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-202ENST00000424011 CCDC196A0A1B0GTZ2 297 aa19.23■□□□□ 0.67
CMTM3-202ENST00000424011 BAG3O95817 575 aa19.23■□□□□ 0.67
CMTM3-202ENST00000424011 FGRP09769 529 aa19.23■□□□□ 0.67
CMTM3-202ENST00000424011 SRGNP10124 158 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms