RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 A0A1W2PQ27 194 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 A0A1W2PQ64 194 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 A0A1W2PQD8 194 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
MSH5-206ENST00000423982 KIF2AO00139 706 aaPredicted RBP16.55■□□□□ 0.24
MSH5-206ENST00000423982 POLR3GO15318 223 aaPredicted RBP16.55■□□□□ 0.24
MSH5-206ENST00000423982 PCCAP05165 728 aaPredicted RBP16.55■□□□□ 0.24
MSH5-206ENST00000423982 GTF2E1P29083 439 aaPredicted RBP16.55■□□□□ 0.24
MSH5-206ENST00000423982 NLRP12P59046 1061 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 BMS1Q14692 1282 aaKnown RBP16.55■□□□□ 0.24
MSH5-206ENST00000423982 RABL6Q3YEC7 729 aaPredicted RBP16.55■□□□□ 0.24
MSH5-206ENST00000423982 SLC27A3Q5K4L6 730 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 MYSM1Q5VVJ2 828 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 ZNF274Q96GC6 653 aaPredicted RBP16.55■□□□□ 0.24
MSH5-206ENST00000423982 DSCC1Q9BVC3 393 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 URI1O94763 535 aaPredicted RBP16.55■□□□□ 0.24
MSH5-206ENST00000423982 ETF1P62495 437 aaKnown RBP16.55■□□□□ 0.24
MSH5-206ENST00000423982 LRRC24Q50LG9 513 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 ATL3Q6DD88 541 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 TRIM65Q6PJ69 517 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 ATG9AQ7Z3C6 839 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 OSBP2Q969R2 916 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 UTP14AQ9BVJ6 771 aaKnown RBP16.55■□□□□ 0.24
MSH5-206ENST00000423982 NARFQ9UHQ1 456 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 DENND2AQ9ULE3 1009 aa16.55■□□□□ 0.24
MSH5-206ENST00000423982 TRIM28Q13263 835 aaKnown RBP16.54■□□□□ 0.24
MSH5-206ENST00000423982 AXDND1Q5T1B0 1012 aaPredicted RBP16.54■□□□□ 0.24
MSH5-206ENST00000423982 TAF3Q5VWG9 929 aa16.54■□□□□ 0.24
MSH5-206ENST00000423982 CARD6Q9BX69 1037 aa16.54■□□□□ 0.24
MSH5-206ENST00000423982 ORC3Q9UBD5 711 aaPredicted RBP16.54■□□□□ 0.24
MSH5-206ENST00000423982 TAF1LQ8IZX4 1826 aa16.54■□□□□ 0.24
MSH5-206ENST00000423982 KLF18A0A0U1RQI7 1052 aa16.54■□□□□ 0.24
MSH5-206ENST00000423982 IRX5P78411 483 aaPredicted RBP16.54■□□□□ 0.24
MSH5-206ENST00000423982 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
MSH5-206ENST00000423982 NKX2-3Q8TAU0 364 aa16.54■□□□□ 0.24
MSH5-206ENST00000423982 HELLSQ9NRZ9 838 aa16.54■□□□□ 0.24
MSH5-206ENST00000423982 GOLGA8BA8MQT2 603 aa16.54■□□□□ 0.24
MSH5-206ENST00000423982 FOXP2O15409 715 aa16.54■□□□□ 0.24
MSH5-206ENST00000423982 FBXO18Q8NFZ0 1043 aa16.54■□□□□ 0.24
MSH5-206ENST00000423982 GREM2Q9H772 168 aa16.54■□□□□ 0.24
MSH5-206ENST00000423982 ZCCHC17Q9NP64 241 aaKnown RBP16.54■□□□□ 0.24
MSH5-206ENST00000423982 HPS5Q9UPZ3 1129 aa16.54■□□□□ 0.24
MSH5-206ENST00000423982 RXRAP19793 462 aa16.53■□□□□ 0.24
MSH5-206ENST00000423982 FKBP4Q02790 459 aaKnown RBP eCLIP16.53■□□□□ 0.24
MSH5-206ENST00000423982 PNOCQ13519 176 aa16.53■□□□□ 0.24
MSH5-206ENST00000423982 BPIFA3Q9BQP9 254 aa16.53■□□□□ 0.24
MSH5-206ENST00000423982 RFX7Q2KHR2 1363 aa16.53■□□□□ 0.24
MSH5-206ENST00000423982 VGLL3A8MV65 326 aa16.53■□□□□ 0.24
MSH5-206ENST00000423982 ERFEQ4G0M1 354 aa16.53■□□□□ 0.24
MSH5-206ENST00000423982 KCNG4Q8TDN1 519 aa16.53■□□□□ 0.24
MSH5-206ENST00000423982 UBXN4Q92575 508 aa16.53■□□□□ 0.24
MSH5-206ENST00000423982 SETDB2Q96T68 719 aa16.53■□□□□ 0.24
MSH5-206ENST00000423982 POLR3EQ9NVU0 708 aa16.53■□□□□ 0.24
MSH5-206ENST00000423982 PLSCR1O15162 318 aa16.52■□□□□ 0.24
MSH5-206ENST00000423982 SERPINC1P01008 464 aa16.52■□□□□ 0.24
MSH5-206ENST00000423982 IFIT1P09914 478 aaKnown RBP16.52■□□□□ 0.24
MSH5-206ENST00000423982 UBASH3AP57075 661 aa16.52■□□□□ 0.24
MSH5-206ENST00000423982 CFAP100Q494V2 611 aa16.52■□□□□ 0.24
MSH5-206ENST00000423982 TAF7LQ5H9L4 462 aa16.52■□□□□ 0.24
MSH5-206ENST00000423982 ANO1Q5XXA6 986 aa16.52■□□□□ 0.24
MSH5-206ENST00000423982 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.24
MSH5-206ENST00000423982 CCDC66A2RUB6 948 aa16.52■□□□□ 0.23
MSH5-206ENST00000423982 ZRANB2O95218 330 aaKnown RBP eCLIP16.52■□□□□ 0.23
MSH5-206ENST00000423982 CCDC57Q2TAC2 916 aa16.52■□□□□ 0.23
MSH5-206ENST00000423982 SYNE3Q6ZMZ3 975 aa16.52■□□□□ 0.23
MSH5-206ENST00000423982 REXO1L1PQ8IX06 675 aa16.52■□□□□ 0.23
MSH5-206ENST00000423982 CLIC6Q96NY7 704 aa16.52■□□□□ 0.23
MSH5-206ENST00000423982 RREB1Q92766 1687 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 RNF113AO15541 343 aaKnown RBP16.51■□□□□ 0.23
MSH5-206ENST00000423982 PRC1O43663 620 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 NTSR2O95665 410 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 MSL1Q68DK7 614 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 NBPF5PQ86XG9 351 aaPredicted RBP16.51■□□□□ 0.23
MSH5-206ENST00000423982 NEK11Q8NG66 645 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 SASH3O75995 380 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 YEATS4O95619 227 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 CYP2C19P33261 490 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 CTSWP56202 376 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 ANTXR2P58335 489 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 MNS1Q8NEH6 495 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 TIGD1Q96MW7 591 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 PARP3Q9Y6F1 533 aa16.51■□□□□ 0.23
MSH5-206ENST00000423982 UBE2Q2LH0YL09 131 aa16.5■□□□□ 0.23
MSH5-206ENST00000423982 HNRNPH2P55795 449 aaKnown RBP16.5■□□□□ 0.23
MSH5-206ENST00000423982 KIF23Q02241 960 aaPredicted RBP16.5■□□□□ 0.23
MSH5-206ENST00000423982 SF3B2Q13435 895 aaKnown RBP16.5■□□□□ 0.23
MSH5-206ENST00000423982 WASHC4Q2M389 1173 aa16.5■□□□□ 0.23
MSH5-206ENST00000423982 C3orf67Q6ZVT6 689 aa16.5■□□□□ 0.23
MSH5-206ENST00000423982 TTLL11Q8NHH1 800 aa16.5■□□□□ 0.23
MSH5-206ENST00000423982 FANCLQ9NW38 375 aa16.5■□□□□ 0.23
MSH5-206ENST00000423982 CICQ96RK0 1608 aaPredicted RBP16.5■□□□□ 0.23
MSH5-206ENST00000423982 FOXN1O15353 648 aa16.5■□□□□ 0.23
MSH5-206ENST00000423982 TADA3O75528 432 aa16.5■□□□□ 0.23
MSH5-206ENST00000423982 ITGA6P23229 1130 aa16.5■□□□□ 0.23
MSH5-206ENST00000423982 ST5P78524 1137 aa16.5■□□□□ 0.23
MSH5-206ENST00000423982 TMCO3Q6UWJ1 677 aa16.5■□□□□ 0.23
MSH5-206ENST00000423982 CLEC4GQ6UXB4 293 aa16.5■□□□□ 0.23
MSH5-206ENST00000423982 WDR24Q96S15 920 aa16.5■□□□□ 0.23
MSH5-206ENST00000423982 A0A1B0GUL7 405 aa16.49■□□□□ 0.23
MSH5-206ENST00000423982 CPLX1O14810 134 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms