RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ZHX2Q9Y6X8 837 aa20.95■□□□□ 0.94
UPF3AP3-201ENST00000420996 H0YGN5 161 aa20.94■□□□□ 0.94
UPF3AP3-201ENST00000420996 ADORA1P30542 326 aa20.94■□□□□ 0.94
UPF3AP3-201ENST00000420996 SLF2Q8IX21 1173 aa20.94■□□□□ 0.94
UPF3AP3-201ENST00000420996 SHISA4Q96DD7 197 aa20.94■□□□□ 0.94
UPF3AP3-201ENST00000420996 FAM163AQ96GL9 167 aaPredicted RBP20.94■□□□□ 0.94
UPF3AP3-201ENST00000420996 PICK1Q9NRD5 415 aa20.94■□□□□ 0.94
UPF3AP3-201ENST00000420996 PDS5AQ29RF7 1337 aaKnown RBP20.94■□□□□ 0.94
UPF3AP3-201ENST00000420996 A0A0G2JLL6 359 aaPredicted RBP20.93■□□□□ 0.94
UPF3AP3-201ENST00000420996 CYP2C8P10632 490 aa20.93■□□□□ 0.94
UPF3AP3-201ENST00000420996 PTPRAP18433 802 aa20.93■□□□□ 0.94
UPF3AP3-201ENST00000420996 FCGRTP55899 365 aa20.93■□□□□ 0.94
UPF3AP3-201ENST00000420996 SH3BP5LQ7L8J4 393 aa20.93■□□□□ 0.94
UPF3AP3-201ENST00000420996 PRRT2Q7Z6L0 340 aaPredicted RBP20.93■□□□□ 0.94
UPF3AP3-201ENST00000420996 DZIP1Q86YF9 867 aaKnown RBP20.93■□□□□ 0.94
UPF3AP3-201ENST00000420996 ZSCAN29Q8IWY8 852 aaPredicted RBP20.93■□□□□ 0.94
UPF3AP3-201ENST00000420996 AFG3L2Q9Y4W6 797 aa20.93■□□□□ 0.94
UPF3AP3-201ENST00000420996 RFX7Q2KHR2 1363 aa20.93■□□□□ 0.94
UPF3AP3-201ENST00000420996 GJB1P08034 283 aa20.92■□□□□ 0.94
UPF3AP3-201ENST00000420996 CCL5P13501 91 aa20.92■□□□□ 0.94
UPF3AP3-201ENST00000420996 GJA8P48165 433 aa20.92■□□□□ 0.94
UPF3AP3-201ENST00000420996 TIMM10P62072 90 aa20.92■□□□□ 0.94
UPF3AP3-201ENST00000420996 RASGRF1Q13972 1273 aa20.92■□□□□ 0.94
UPF3AP3-201ENST00000420996 SPTY2D1Q68D10 685 aaPredicted RBP20.92■□□□□ 0.94
UPF3AP3-201ENST00000420996 ABCF2Q9UG63 623 aa20.92■□□□□ 0.94
UPF3AP3-201ENST00000420996 SLC45A1Q9Y2W3 748 aa20.92■□□□□ 0.94
UPF3AP3-201ENST00000420996 PTPRFP10586 1907 aa20.92■□□□□ 0.94
UPF3AP3-201ENST00000420996 UBXN2AP68543 259 aa20.91■□□□□ 0.94
UPF3AP3-201ENST00000420996 PRKCZQ05513 592 aa20.91■□□□□ 0.94
UPF3AP3-201ENST00000420996 DOCK1Q14185 1865 aa20.91■□□□□ 0.94
UPF3AP3-201ENST00000420996 PHIPQ8WWQ0 1821 aa20.91■□□□□ 0.94
UPF3AP3-201ENST00000420996 MEIS3Q99687 375 aa20.91■□□□□ 0.94
UPF3AP3-201ENST00000420996 BIN2Q9UBW5 565 aaPredicted RBP20.91■□□□□ 0.94
UPF3AP3-201ENST00000420996 DDTLA6NHG4 134 aaPredicted RBP20.9■□□□□ 0.94
UPF3AP3-201ENST00000420996 CTNND1O60716 968 aaKnown RBP20.9■□□□□ 0.94
UPF3AP3-201ENST00000420996 GADL1Q6ZQY3 521 aa20.9■□□□□ 0.94
UPF3AP3-201ENST00000420996 SLAIN1Q8ND83 568 aa20.9■□□□□ 0.94
UPF3AP3-201ENST00000420996 RNF208Q9H0X6 261 aa20.9■□□□□ 0.94
UPF3AP3-201ENST00000420996 DDX4Q9NQI0 724 aaKnown RBP20.9■□□□□ 0.94
UPF3AP3-201ENST00000420996 AKAP2Q9Y2D5 859 aa20.9■□□□□ 0.94
UPF3AP3-201ENST00000420996 MROH7-TTC4A0A0A0MT08 1334 aa20.89■□□□□ 0.93
UPF3AP3-201ENST00000420996 A0A1B0GUL7 405 aa20.89■□□□□ 0.93
UPF3AP3-201ENST00000420996 BTDP43251 543 aa20.89■□□□□ 0.93
UPF3AP3-201ENST00000420996 UBE2Q1Q7Z7E8 422 aa20.89■□□□□ 0.93
UPF3AP3-201ENST00000420996 DPF3Q92784 378 aa20.89■□□□□ 0.93
UPF3AP3-201ENST00000420996 XAGE2Q96GT9 111 aa20.89■□□□□ 0.93
UPF3AP3-201ENST00000420996 GABRQQ9UN88 632 aa20.89■□□□□ 0.93
UPF3AP3-201ENST00000420996 PICALMQ13492 652 aa20.88■□□□□ 0.93
UPF3AP3-201ENST00000420996 MVPQ14764 893 aaKnown RBP20.88■□□□□ 0.93
UPF3AP3-201ENST00000420996 GPR75-ASB3A0A0A6YYF3 556 aa20.87■□□□□ 0.93
UPF3AP3-201ENST00000420996 TBC1D12O60347 775 aa20.87■□□□□ 0.93
UPF3AP3-201ENST00000420996 NPM3O75607 178 aaKnown RBP20.87■□□□□ 0.93
UPF3AP3-201ENST00000420996 GNAI3P08754 354 aa20.87■□□□□ 0.93
UPF3AP3-201ENST00000420996 SLURP2P0DP57 97 aa20.87■□□□□ 0.93
UPF3AP3-201ENST00000420996 MECOMQ03112 1051 aa20.87■□□□□ 0.93
UPF3AP3-201ENST00000420996 TFCP2Q12800 502 aa20.87■□□□□ 0.93
UPF3AP3-201ENST00000420996 ERICH6Q7L0X2 663 aa20.87■□□□□ 0.93
UPF3AP3-201ENST00000420996 ARHGAP45Q92619 1136 aa20.87■□□□□ 0.93
UPF3AP3-201ENST00000420996 HTATIP2Q9BUP3 242 aa20.87■□□□□ 0.93
UPF3AP3-201ENST00000420996 SRGAP3O43295 1099 aa20.86■□□□□ 0.93
UPF3AP3-201ENST00000420996 ADCY3O60266 1144 aa20.86■□□□□ 0.93
UPF3AP3-201ENST00000420996 RHBDL3P58872 404 aa20.86■□□□□ 0.93
UPF3AP3-201ENST00000420996 MTX1Q13505 466 aa20.86■□□□□ 0.93
UPF3AP3-201ENST00000420996 SMCR8Q8TEV9 937 aaPredicted RBP20.86■□□□□ 0.93
UPF3AP3-201ENST00000420996 U2AF1L4Q8WU68 220 aaKnown RBP20.86■□□□□ 0.93
UPF3AP3-201ENST00000420996 CEP290O15078 2479 aa20.86■□□□□ 0.93
UPF3AP3-201ENST00000420996 TRIM75PA6NK02 468 aa20.85■□□□□ 0.93
UPF3AP3-201ENST00000420996 MAP4K4O95819 1239 aaPredicted RBP20.85■□□□□ 0.93
UPF3AP3-201ENST00000420996 FLT3LGP49771 235 aa20.85■□□□□ 0.93
UPF3AP3-201ENST00000420996 RARSP54136 660 aaKnown RBP20.85■□□□□ 0.93
UPF3AP3-201ENST00000420996 PXYLP1Q8TE99 480 aa20.85■□□□□ 0.93
UPF3AP3-201ENST00000420996 ZNF384Q8TF68 577 aa20.85■□□□□ 0.93
UPF3AP3-201ENST00000420996 UNC93B1Q9H1C4 597 aa20.85■□□□□ 0.93
UPF3AP3-201ENST00000420996 AGTPBP1Q9UPW5 1226 aa20.85■□□□□ 0.93
UPF3AP3-201ENST00000420996 SGPL1O95470 568 aa20.84■□□□□ 0.93
UPF3AP3-201ENST00000420996 LDHCP07864 332 aa20.84■□□□□ 0.93
UPF3AP3-201ENST00000420996 CAPN2P17655 700 aa20.84■□□□□ 0.93
UPF3AP3-201ENST00000420996 IRF5Q13568 498 aa20.84■□□□□ 0.93
UPF3AP3-201ENST00000420996 CHRDL2Q6WN34 429 aa20.84■□□□□ 0.93
UPF3AP3-201ENST00000420996 NEUROD6Q96NK8 337 aa20.84■□□□□ 0.93
UPF3AP3-201ENST00000420996 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.84■□□□□ 0.93
UPF3AP3-201ENST00000420996 TNPO2O14787 897 aaKnown RBP20.83■□□□□ 0.93
UPF3AP3-201ENST00000420996 FARP2O94887 1054 aaPredicted RBP20.83■□□□□ 0.93
UPF3AP3-201ENST00000420996 GSTO1P78417 241 aa20.83■□□□□ 0.93
UPF3AP3-201ENST00000420996 OSBPL5Q9H0X9 879 aaPredicted RBP20.83■□□□□ 0.93
UPF3AP3-201ENST00000420996 HMG20BQ9P0W2 317 aa20.83■□□□□ 0.93
UPF3AP3-201ENST00000420996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.83■□□□□ 0.93
UPF3AP3-201ENST00000420996 DOCK3Q8IZD9 2030 aa20.83■□□□□ 0.92
UPF3AP3-201ENST00000420996 ELNP15502 786 aa20.82■□□□□ 0.92
UPF3AP3-201ENST00000420996 GORABQ5T7V8 394 aa20.82■□□□□ 0.92
UPF3AP3-201ENST00000420996 CCDC84Q86UT8 332 aaPredicted RBP20.82■□□□□ 0.92
UPF3AP3-201ENST00000420996 SPATA5Q8NB90 893 aa20.82■□□□□ 0.92
UPF3AP3-201ENST00000420996 PROCA1Q8NCQ7 364 aaPredicted RBP20.82■□□□□ 0.92
UPF3AP3-201ENST00000420996 NSUN4Q96CB9 384 aaKnown RBP20.82■□□□□ 0.92
UPF3AP3-201ENST00000420996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.82■□□□□ 0.92
UPF3AP3-201ENST00000420996 PNMA3Q9UL41 463 aa20.82■□□□□ 0.92
UPF3AP3-201ENST00000420996 NR2E3Q9Y5X4 410 aa20.82■□□□□ 0.92
UPF3AP3-201ENST00000420996 TRIOBPQ9H2D6 2365 aa20.82■□□□□ 0.92
UPF3AP3-201ENST00000420996 COL2A1P02458 1487 aaPredicted RBP20.81■□□□□ 0.92
UPF3AP3-201ENST00000420996 ATAD5Q96QE3 1844 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms