RNA–Protein interactions for RNA: ENST00000419357.5

LINC00243-202, long intergenic non-protein coding RNA 243, humanhuman

TSL 3

Gene LINC00243, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-202ENST00000419357 ITGAEP38570 1179 aa6.43□□□□□ -1.38
LINC00243-202ENST00000419357 RNFT1Q5M7Z0 435 aa6.43□□□□□ -1.38
LINC00243-202ENST00000419357 IER5Q5VY09 327 aa6.43□□□□□ -1.38
LINC00243-202ENST00000419357 B4GALNT3Q6L9W6 998 aa6.43□□□□□ -1.38
LINC00243-202ENST00000419357 TRERF1Q96PN7 1200 aa6.43□□□□□ -1.38
LINC00243-202ENST00000419357 TRAIPQ9BWF2 469 aa6.43□□□□□ -1.38
LINC00243-202ENST00000419357 ATXN7L1Q9ULK2 861 aaPredicted RBP6.43□□□□□ -1.38
LINC00243-202ENST00000419357 PHF24Q9UPV7 400 aa6.43□□□□□ -1.38
LINC00243-202ENST00000419357 COL6A3P12111 3177 aa6.43□□□□□ -1.38
LINC00243-202ENST00000419357 C5P01031 1676 aa6.42□□□□□ -1.38
LINC00243-202ENST00000419357 NFKBIEO00221 500 aa6.42□□□□□ -1.38
LINC00243-202ENST00000419357 TNFRSF10BO14763 440 aa6.42□□□□□ -1.38
LINC00243-202ENST00000419357 MAPTP10636 758 aaKnown RBP6.42□□□□□ -1.38
LINC00243-202ENST00000419357 LORP23490 312 aaPredicted RBP6.42□□□□□ -1.38
LINC00243-202ENST00000419357 ARID4AP29374 1257 aaPredicted RBP6.42□□□□□ -1.38
LINC00243-202ENST00000419357 MPRIPQ6WCQ1 1025 aa6.42□□□□□ -1.38
LINC00243-202ENST00000419357 BTLAQ7Z6A9 289 aa6.42□□□□□ -1.38
LINC00243-202ENST00000419357 CTU1Q7Z7A3 348 aaKnown RBP6.42□□□□□ -1.38
LINC00243-202ENST00000419357 IFT43Q96FT9 208 aa6.42□□□□□ -1.38
LINC00243-202ENST00000419357 ABHD17AQ96GS6 310 aa6.42□□□□□ -1.38
LINC00243-202ENST00000419357 CPSF1Q10570 1443 aaKnown RBP6.42□□□□□ -1.38
LINC00243-202ENST00000419357 TGFBR3LH3BV60 316 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 KHNYNO15037 678 aaKnown RBP6.41□□□□□ -1.38
LINC00243-202ENST00000419357 MICAL2O94851 1124 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 BRD1O95696 1058 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 BRD2P25440 801 aaKnown RBP6.41□□□□□ -1.38
LINC00243-202ENST00000419357 CTBSQ01459 385 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 TYRO3Q06418 890 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 LAMC2Q13753 1193 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 FAM26DQ5JW98 314 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 TRAPPC3LQ5T215 181 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 LINC00116Q8NCU8 138 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 CNTNAP3BQ96NU0 1288 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 CNTNAP3Q9BZ76 1288 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 C4BP0C0L5 1744 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 PALLDQ8WX93 1383 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 PIK3C2GO75747 1445 aa6.41□□□□□ -1.38
LINC00243-202ENST00000419357 TIAM2Q8IVF5 1701 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 C2CD2LO14523 706 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 OPLAHO14841 1288 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 FGFR3P22607 806 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 EPHX2P34913 555 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 SFSWAPQ12872 951 aaKnown RBP6.4□□□□□ -1.38
LINC00243-202ENST00000419357 CST9Q5W186 159 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 KCNH5Q8NCM2 988 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 HELQQ8TDG4 1101 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 ANKRD24Q8TF21 1146 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 GTF3C2Q8WUA4 911 aaPredicted RBP6.4□□□□□ -1.38
LINC00243-202ENST00000419357 FAM122AQ96E09 287 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 CEP63Q96MT8 703 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 MBIPQ9NS73 344 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 STIM2Q9P246 746 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 HACL1Q9UJ83 578 aa6.4□□□□□ -1.38
LINC00243-202ENST00000419357 NSD3Q9BZ95 1437 aa6.4□□□□□ -1.39
LINC00243-202ENST00000419357 DOT1LQ8TEK3 1739 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 TOGARAM1Q9Y4F4 1720 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 TAF1LQ8IZX4 1826 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 UBR3Q6ZT12 1888 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 DCDC2BA2VCK2 349 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 TRAF5O00463 557 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 TRPA1O75762 1119 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 NPR3P17342 541 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 MX2P20592 715 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 INPP5BP32019 993 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 SRSF11Q05519 484 aaKnown RBP6.39□□□□□ -1.39
LINC00243-202ENST00000419357 ETFBKMTQ8IXQ9 262 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 SYNE4Q8N205 404 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 ZCRB1Q8TBF4 217 aaKnown RBP6.39□□□□□ -1.39
LINC00243-202ENST00000419357 LTV1Q96GA3 475 aaPredicted RBP6.39□□□□□ -1.39
LINC00243-202ENST00000419357 MARK1Q9P0L2 795 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 MTMR7Q9Y216 660 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 DNMT3AQ9Y6K1 912 aaPredicted RBP6.39□□□□□ -1.39
LINC00243-202ENST00000419357 THSD7BQ9C0I4 1608 aa6.39□□□□□ -1.39
LINC00243-202ENST00000419357 SLURP2P0DP57 97 aa6.38□□□□□ -1.39
LINC00243-202ENST00000419357 GYS1P13807 737 aa6.38□□□□□ -1.39
LINC00243-202ENST00000419357 GRNP28799 593 aaKnown RBP6.38□□□□□ -1.39
LINC00243-202ENST00000419357 RFC4P35249 363 aa6.38□□□□□ -1.39
LINC00243-202ENST00000419357 PLA2G5P39877 138 aa6.38□□□□□ -1.39
LINC00243-202ENST00000419357 TREML1Q86YW5 311 aa6.38□□□□□ -1.39
LINC00243-202ENST00000419357 TTLL6Q8N841 843 aa6.38□□□□□ -1.39
LINC00243-202ENST00000419357 BRD7Q9NPI1 651 aa6.38□□□□□ -1.39
LINC00243-202ENST00000419357 KCNH4Q9UQ05 1017 aa6.38□□□□□ -1.39
LINC00243-202ENST00000419357 RTCBQ9Y3I0 505 aaKnown RBP6.38□□□□□ -1.39
LINC00243-202ENST00000419357 SLIT3O75094 1523 aa6.38□□□□□ -1.39
LINC00243-202ENST00000419357 C4AP0C0L4 1744 aa6.37□□□□□ -1.39
LINC00243-202ENST00000419357 H0YGN5 161 aa6.37□□□□□ -1.39
LINC00243-202ENST00000419357 ZBTB39O15060 712 aa6.37□□□□□ -1.39
LINC00243-202ENST00000419357 CD33P20138 364 aa6.37□□□□□ -1.39
LINC00243-202ENST00000419357 IDH3AP50213 366 aa6.37□□□□□ -1.39
LINC00243-202ENST00000419357 GRIN2CQ14957 1233 aa6.37□□□□□ -1.39
LINC00243-202ENST00000419357 AKAP4Q5JQC9 854 aa6.37□□□□□ -1.39
LINC00243-202ENST00000419357 PNMA8AQ86V59 439 aaPredicted RBP6.37□□□□□ -1.39
LINC00243-202ENST00000419357 SMARCC1Q92922 1105 aaPredicted RBP6.37□□□□□ -1.39
LINC00243-202ENST00000419357 C11orf16Q9NQ32 467 aa6.37□□□□□ -1.39
LINC00243-202ENST00000419357 EGFL7Q9UHF1 273 aa6.37□□□□□ -1.39
LINC00243-202ENST00000419357 HDAC9Q9UKV0 1011 aa6.37□□□□□ -1.39
LINC00243-202ENST00000419357 PDIA4P13667 645 aaKnown RBP6.36□□□□□ -1.39
LINC00243-202ENST00000419357 MAP2K3P46734 347 aa6.36□□□□□ -1.39
LINC00243-202ENST00000419357 ARSDP51689 593 aa6.36□□□□□ -1.39
LINC00243-202ENST00000419357 FKBP4Q02790 459 aaKnown RBP eCLIP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms