RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GOLGA8AA7E2F4 631 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 MYSM1Q5VVJ2 828 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 MFSD6Q6ZSS7 791 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 TXNRD3Q86VQ6 643 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 SGMS1Q86VZ5 419 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 CMTR1Q8N1G2 835 aaKnown RBP17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 FAM200AQ8TCP9 573 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 DNAJC25Q9H1X3 360 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 CBX8Q9HC52 389 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 ZPR1O75312 459 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 DMTNQ08495 405 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 FSIP1Q8NA03 581 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 ENGASEQ8NFI3 743 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 STAG1Q8WVM7 1258 aa17.68■□□□□ 0.42
SCAMP4-202ENST00000409472 MINDY4BA8MYZ0 360 aa17.67■□□□□ 0.42
SCAMP4-202ENST00000409472 RC3H1Q5TC82 1133 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-202ENST00000409472 VPS37DQ86XT2 251 aa17.67■□□□□ 0.42
SCAMP4-202ENST00000409472 LINC00301Q8NCQ3 95 aa17.67■□□□□ 0.42
SCAMP4-202ENST00000409472 RTEL1Q9NZ71 1219 aa17.67■□□□□ 0.42
SCAMP4-202ENST00000409472 R3HCC1Q9Y3T6 440 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-202ENST00000409472 MYH2Q9UKX2 1941 aa17.67■□□□□ 0.42
SCAMP4-202ENST00000409472 MAGEB6P1A0A0J9YX57 407 aa17.67■□□□□ 0.42
SCAMP4-202ENST00000409472 GUCY1A2P33402 732 aa17.67■□□□□ 0.42
SCAMP4-202ENST00000409472 RPS8P62241 208 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-202ENST00000409472 PPARAQ07869 468 aa17.67■□□□□ 0.42
SCAMP4-202ENST00000409472 RTCBQ9Y3I0 505 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-202ENST00000409472 A0A1B0GVL5 298 aa17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 KRT40Q6A162 431 aa17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 C11orf57Q6ZUT1 292 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 NLRP3Q96P20 1036 aa17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 NACAP1Q9BZK3 213 aa17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 TTC12Q9H892 705 aaPredicted RBP17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 MROH7-TTC4A0A0A0MT08 1334 aa17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 UQCRHLA0A096LP55 91 aa17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 UQCRHP07919 91 aa17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 GNAT2P19087 354 aa17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 TM4SF1P30408 202 aa17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 CAVIN4Q5BKX8 364 aa17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 SLC12A7Q9Y666 1083 aa17.66■□□□□ 0.42
SCAMP4-202ENST00000409472 DUOX1Q9NRD9 1551 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 LIFRP42702 1097 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 CCDC82Q8N4S0 544 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 FBXO41Q8TF61 875 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 SLC26A6Q9BXS9 759 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 LRRC4BQ9NT99 713 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 GNL3LQ9NVN8 582 aaKnown RBP17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 ZHX1Q9UKY1 873 aaPredicted RBP17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 PRDM1O75626 825 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 PRDX5P30044 214 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 NDUFA8P51970 172 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 FAM160A1Q05DH4 1040 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 STK38Q15208 465 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 CCDC73Q6ZRK6 1079 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 FBXO33Q7Z6M2 555 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 CHMP4CQ96CF2 233 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 KRT23Q9C075 422 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 CNNM2Q9H8M5 875 aa17.65■□□□□ 0.42
SCAMP4-202ENST00000409472 ZNF500O60304 480 aaPredicted RBP17.64■□□□□ 0.41
SCAMP4-202ENST00000409472 CHAF1AQ13111 956 aaPredicted RBP17.64■□□□□ 0.41
SCAMP4-202ENST00000409472 ATL3Q6DD88 541 aa17.64■□□□□ 0.41
SCAMP4-202ENST00000409472 C17orf53Q8N3J3 647 aaPredicted RBP17.64■□□□□ 0.41
SCAMP4-202ENST00000409472 NYXQ9GZU5 481 aa17.64■□□□□ 0.41
SCAMP4-202ENST00000409472 POLR3EQ9NVU0 708 aa17.64■□□□□ 0.41
SCAMP4-202ENST00000409472 IARSP41252 1262 aaKnown RBP17.64■□□□□ 0.41
SCAMP4-202ENST00000409472 SPC24Q8NBT2 197 aa17.64■□□□□ 0.41
SCAMP4-202ENST00000409472 MARCKSP29966 332 aaPredicted RBP17.63■□□□□ 0.41
SCAMP4-202ENST00000409472 MECOMQ03112 1051 aa17.63■□□□□ 0.41
SCAMP4-202ENST00000409472 SASS6Q6UVJ0 657 aa17.63■□□□□ 0.41
SCAMP4-202ENST00000409472 FAM196AQ6ZSG2 479 aa17.63■□□□□ 0.41
SCAMP4-202ENST00000409472 BRAPQ7Z569 592 aa17.63■□□□□ 0.41
SCAMP4-202ENST00000409472 FMR1NBQ8N0W7 255 aaPredicted RBP17.63■□□□□ 0.41
SCAMP4-202ENST00000409472 MRPS27Q92552 414 aaKnown RBP17.63■□□□□ 0.41
SCAMP4-202ENST00000409472 FBXW7Q969H0 707 aa17.63■□□□□ 0.41
SCAMP4-202ENST00000409472 NSUN4Q96CB9 384 aaKnown RBP17.63■□□□□ 0.41
SCAMP4-202ENST00000409472 GJD4Q96KN9 370 aaPredicted RBP17.63■□□□□ 0.41
SCAMP4-202ENST00000409472 GPR101Q96P66 508 aaPredicted RBP17.63■□□□□ 0.41
SCAMP4-202ENST00000409472 SPTLC2O15270 562 aa17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 WDHD1O75717 1129 aaPredicted RBP17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 WTAPQ15007 396 aa17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 ANO1Q5XXA6 986 aa17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 BBXQ8WY36 941 aaPredicted RBP17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 IRS2Q9Y4H2 1338 aa17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 KINO60870 393 aaKnown RBP17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 CDKL5O76039 1030 aa17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 ZNF165P49910 485 aa17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 NFIXQ14938 502 aa17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 TPTE2Q6XPS3 522 aa17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 KLHL34Q8N239 644 aa17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 CCDC94Q9BW85 323 aaPredicted RBP17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 TNKSO95271 1327 aa17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 AFF2P51816 1311 aa17.62■□□□□ 0.41
SCAMP4-202ENST00000409472 SF3A1Q15459 793 aaKnown RBP17.61■□□□□ 0.41
SCAMP4-202ENST00000409472 SLC4A8Q2Y0W8 1093 aa17.61■□□□□ 0.41
SCAMP4-202ENST00000409472 AXDND1Q5T1B0 1012 aaPredicted RBP17.61■□□□□ 0.41
SCAMP4-202ENST00000409472 ADALQ6DHV7 355 aa17.61■□□□□ 0.41
SCAMP4-202ENST00000409472 NUP133Q8WUM0 1156 aa17.61■□□□□ 0.41
SCAMP4-202ENST00000409472 AATFQ9NY61 560 aaKnown RBP eCLIP17.61■□□□□ 0.415e-6■■□□□ 11.7
SCAMP4-202ENST00000409472 KCNJ14Q9UNX9 436 aa17.61■□□□□ 0.41
SCAMP4-202ENST00000409472 SPATA31A6Q5VVP1 1343 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms