RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ACEP12821 1306 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 CALM1P0DP23 149 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 CALM2P0DP24 149 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 CALM3P0DP25 149 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 DESP17661 470 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 IL13P35225 146 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 CALCOCO2Q13137 446 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 STXBP4Q6ZWJ1 553 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 XAGE3Q8WTP9 111 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 HOMER2Q9NSB8 354 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 PCDHA7Q9UN72 937 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 MAGI2Q86UL8 1455 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 TSPY2A6NKD2 308 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 RAPGEF3O95398 923 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 MXRA7P84157 204 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 PDE4BQ07343 736 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 SSH3Q8TE77 659 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 TMEM87BQ96K49 555 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 CABP5Q9NP86 173 aa19.8■□□□□ 0.76
SMPD4-202ENST00000409031 RAPGEF6Q8TEU7 1601 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 ACTN4O43707 911 aaKnown RBP19.79■□□□□ 0.76
SMPD4-202ENST00000409031 MEX3CQ5U5Q3 659 aaKnown RBP19.79■□□□□ 0.76
SMPD4-202ENST00000409031 C11orf57Q6ZUT1 292 aaPredicted RBP19.79■□□□□ 0.76
SMPD4-202ENST00000409031 DAAM2Q86T65 1068 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 TRMT44Q8IYL2 757 aaKnown RBP19.79■□□□□ 0.76
SMPD4-202ENST00000409031 TRIML1Q8N9V2 468 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 STMN2Q93045 179 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 ODF2LQ9ULJ1 636 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 GCC2Q8IWJ2 1684 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 SNRPA1P09661 255 aaKnown RBP19.79■□□□□ 0.76
SMPD4-202ENST00000409031 GNAQP50148 359 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 RBBP5Q15291 538 aaKnown RBP19.79■□□□□ 0.76
SMPD4-202ENST00000409031 COPS6Q7L5N1 327 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 TRIM58Q8NG06 486 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 JARID2Q92833 1246 aaPredicted RBP19.79■□□□□ 0.76
SMPD4-202ENST00000409031 PTH1RQ03431 593 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 CWF19L2Q2TBE0 894 aaKnown RBP19.79■□□□□ 0.76
SMPD4-202ENST00000409031 LONRF3Q496Y0 759 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 ANKRD7Q92527 254 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 RIPOR2Q9Y4F9 1068 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 CTNNA2P26232 953 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 TFCP2Q12800 502 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 PNOCQ13519 176 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 GKAP1Q5VSY0 366 aaPredicted RBP19.79■□□□□ 0.76
SMPD4-202ENST00000409031 PPP1R12CQ9BZL4 782 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 TAB2Q9NYJ8 693 aa19.79■□□□□ 0.76
SMPD4-202ENST00000409031 ANGEL1Q9UNK9 670 aaKnown RBP19.79■□□□□ 0.76
SMPD4-202ENST00000409031 DTHD1Q6ZMT9 781 aa19.78■□□□□ 0.76
SMPD4-202ENST00000409031 RASEFQ8IZ41 740 aa19.78■□□□□ 0.76
SMPD4-202ENST00000409031 ZNF274Q96GC6 653 aaPredicted RBP19.78■□□□□ 0.76
SMPD4-202ENST00000409031 VWA3AA6NCI4 1184 aa19.78■□□□□ 0.76
SMPD4-202ENST00000409031 KRT40Q6A162 431 aa19.78■□□□□ 0.76
SMPD4-202ENST00000409031 TADA2BQ86TJ2 420 aa19.78■□□□□ 0.76
SMPD4-202ENST00000409031 DIS3L2Q8IYB7 885 aaKnown RBP19.78■□□□□ 0.76
SMPD4-202ENST00000409031 LSG1Q9H089 658 aaKnown RBP19.78■□□□□ 0.76
SMPD4-202ENST00000409031 PFKFB2O60825 505 aa19.77■□□□□ 0.76
SMPD4-202ENST00000409031 IQCDQ96DY2 449 aa19.77■□□□□ 0.76
SMPD4-202ENST00000409031 RTL9Q8NET4 1388 aa19.77■□□□□ 0.76
SMPD4-202ENST00000409031 ATP2A1O14983 1001 aa19.77■□□□□ 0.76
SMPD4-202ENST00000409031 THEMISQ8N1K5 641 aaPredicted RBP19.77■□□□□ 0.76
SMPD4-202ENST00000409031 UTP11Q9Y3A2 253 aaKnown RBP19.77■□□□□ 0.76
SMPD4-202ENST00000409031 PPP1R7Q15435 360 aa19.77■□□□□ 0.76
SMPD4-202ENST00000409031 IQCGQ9H095 443 aaKnown RBP19.77■□□□□ 0.76
SMPD4-202ENST00000409031 RXRAP19793 462 aa19.77■□□□□ 0.75
SMPD4-202ENST00000409031 ATP1A2P50993 1020 aa19.77■□□□□ 0.75
SMPD4-202ENST00000409031 KRT71Q3SY84 523 aa19.77■□□□□ 0.75
SMPD4-202ENST00000409031 BICC1Q9H694 974 aaKnown RBP19.77■□□□□ 0.75
SMPD4-202ENST00000409031 ADGRL1O94910 1474 aa19.77■□□□□ 0.75
SMPD4-202ENST00000409031 DEXIO95424 95 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 TCP1P17987 556 aaKnown RBP19.76■□□□□ 0.75
SMPD4-202ENST00000409031 VWA3BQ502W6 1294 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 TAOK1Q7L7X3 1001 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 CSGALNACT2Q8N6G5 542 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 TBC1D31Q96DN5 1066 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 ZBTB3Q9H5J0 574 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 VSIG1Q86XK7 387 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 RCOR1Q9UKL0 485 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 MTUS1Q9ULD2 1270 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 EIF3CLB5ME19 914 aaKnown RBP19.76■□□□□ 0.75
SMPD4-202ENST00000409031 FOXO3O43524 673 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 TOM1L2Q6ZVM7 507 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 EIF3CQ99613 913 aaKnown RBP19.76■□□□□ 0.75
SMPD4-202ENST00000409031 NDUFA8P51970 172 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 KBTBD3Q8NAB2 608 aa19.76■□□□□ 0.75
SMPD4-202ENST00000409031 NAA30Q147X3 362 aaPredicted RBP19.75■□□□□ 0.75
SMPD4-202ENST00000409031 CASP8Q14790 479 aa19.75■□□□□ 0.75
SMPD4-202ENST00000409031 NBPF14Q5TI25 921 aa19.75■□□□□ 0.75
SMPD4-202ENST00000409031 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMPD4-202ENST00000409031 RTEL1Q9NZ71 1219 aa19.75■□□□□ 0.75
SMPD4-202ENST00000409031 HOXB7P09629 217 aa19.75■□□□□ 0.75
SMPD4-202ENST00000409031 CC2D1AQ6P1N0 951 aaPredicted RBP19.75■□□□□ 0.75
SMPD4-202ENST00000409031 CCDC25Q86WR0 208 aa19.75■□□□□ 0.75
SMPD4-202ENST00000409031 RGS22Q8NE09 1264 aa19.75■□□□□ 0.75
SMPD4-202ENST00000409031 PPP1R14CQ8TAE6 165 aa19.75■□□□□ 0.75
SMPD4-202ENST00000409031 PLCB1Q9NQ66 1216 aa19.75■□□□□ 0.75
SMPD4-202ENST00000409031 TRMT112Q9UI30 125 aaKnown RBP19.75■□□□□ 0.75
SMPD4-202ENST00000409031 NPATQ14207 1427 aa19.75■□□□□ 0.75
SMPD4-202ENST00000409031 SETSIPP0DME0 302 aa19.74■□□□□ 0.75
SMPD4-202ENST00000409031 CYP2C19P33261 490 aa19.74■□□□□ 0.75
SMPD4-202ENST00000409031 TMEM132AQ24JP5 1023 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms