RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 TRIM47Q96LD4 638 aa24.02■■□□□ 1.44
HDAC11-205ENST00000404548 SLC45A1Q9Y2W3 748 aa24.02■■□□□ 1.44
HDAC11-205ENST00000404548 MROH7-TTC4A0A0A0MT08 1334 aa24.02■■□□□ 1.44
HDAC11-205ENST00000404548 A0A0G2JLL6 359 aaPredicted RBP24.01■■□□□ 1.43
HDAC11-205ENST00000404548 MAP4K4O95819 1239 aaPredicted RBP24.01■■□□□ 1.43
HDAC11-205ENST00000404548 PSMC4P43686 418 aa24.01■■□□□ 1.43
HDAC11-205ENST00000404548 GPAT2Q6NUI2 795 aa24.01■■□□□ 1.43
HDAC11-205ENST00000404548 SH3BP5LQ7L8J4 393 aa24.01■■□□□ 1.43
HDAC11-205ENST00000404548 FASTKD5Q7L8L6 764 aaKnown RBP24.01■■□□□ 1.43
HDAC11-205ENST00000404548 PRRT2Q7Z6L0 340 aaPredicted RBP24.01■■□□□ 1.43
HDAC11-205ENST00000404548 SH3TC2Q8TF17 1288 aa24.01■■□□□ 1.43
HDAC11-205ENST00000404548 XAGE2Q96GT9 111 aa24.01■■□□□ 1.43
HDAC11-205ENST00000404548 PICK1Q9NRD5 415 aa24.01■■□□□ 1.43
HDAC11-205ENST00000404548 ABCF2Q9UG63 623 aa24.01■■□□□ 1.43
HDAC11-205ENST00000404548 IPO8O15397 1037 aaKnown RBP24■■□□□ 1.43
HDAC11-205ENST00000404548 BCRP11274 1271 aa24■■□□□ 1.43
HDAC11-205ENST00000404548 PTPRAP18433 802 aa24■■□□□ 1.43
HDAC11-205ENST00000404548 CTGFP29279 349 aa24■■□□□ 1.43
HDAC11-205ENST00000404548 TFCP2Q12800 502 aa24■■□□□ 1.43
HDAC11-205ENST00000404548 COL2A1P02458 1487 aaPredicted RBP24■■□□□ 1.43
HDAC11-205ENST00000404548 GPR75-ASB3A0A0A6YYF3 556 aa23.99■■□□□ 1.43
HDAC11-205ENST00000404548 CTNND1O60716 968 aaKnown RBP23.99■■□□□ 1.43
HDAC11-205ENST00000404548 BTDP43251 543 aa23.99■■□□□ 1.43
HDAC11-205ENST00000404548 AFG3L2Q9Y4W6 797 aa23.99■■□□□ 1.43
HDAC11-205ENST00000404548 ZHX2Q9Y6X8 837 aa23.99■■□□□ 1.43
HDAC11-205ENST00000404548 CEP290O15078 2479 aa23.99■■□□□ 1.43
HDAC11-205ENST00000404548 TBC1D12O60347 775 aa23.98■■□□□ 1.43
HDAC11-205ENST00000404548 OSBPP22059 807 aa23.98■■□□□ 1.43
HDAC11-205ENST00000404548 MECOMQ03112 1051 aa23.98■■□□□ 1.43
HDAC11-205ENST00000404548 HABP4Q5JVS0 413 aaKnown RBP23.98■■□□□ 1.43
HDAC11-205ENST00000404548 ERICH6Q7L0X2 663 aa23.98■■□□□ 1.43
HDAC11-205ENST00000404548 DDX4Q9NQI0 724 aaKnown RBP23.98■■□□□ 1.43
HDAC11-205ENST00000404548 DDTLA6NHG4 134 aaPredicted RBP23.97■■□□□ 1.43
HDAC11-205ENST00000404548 FMNL1O95466 1100 aaPredicted RBP23.97■■□□□ 1.43
HDAC11-205ENST00000404548 TRIM27P14373 513 aa23.97■■□□□ 1.43
HDAC11-205ENST00000404548 RHBDL3P58872 404 aa23.97■■□□□ 1.43
HDAC11-205ENST00000404548 ZSCAN29Q8IWY8 852 aaPredicted RBP23.97■■□□□ 1.43
HDAC11-205ENST00000404548 MYPNQ86TC9 1320 aa23.96■■□□□ 1.43
HDAC11-205ENST00000404548 GNAI2P04899 355 aa23.96■■□□□ 1.43
HDAC11-205ENST00000404548 ARID4AP29374 1257 aaPredicted RBP23.96■■□□□ 1.43
HDAC11-205ENST00000404548 GRK4P32298 578 aa23.96■■□□□ 1.43
HDAC11-205ENST00000404548 FCGRTP55899 365 aa23.96■■□□□ 1.43
HDAC11-205ENST00000404548 GSTO1P78417 241 aa23.96■■□□□ 1.43
HDAC11-205ENST00000404548 ATF7IPQ6VMQ6 1270 aa23.96■■□□□ 1.43
HDAC11-205ENST00000404548 RAET1EQ8TD07 263 aa23.96■■□□□ 1.43
HDAC11-205ENST00000404548 ZNF384Q8TF68 577 aa23.96■■□□□ 1.43
HDAC11-205ENST00000404548 HMG20BQ9P0W2 317 aa23.96■■□□□ 1.43
HDAC11-205ENST00000404548 DOCK1Q14185 1865 aa23.96■■□□□ 1.43
HDAC11-205ENST00000404548 CYP2C8P10632 490 aa23.95■■□□□ 1.42
HDAC11-205ENST00000404548 SPATA5Q8NB90 893 aa23.95■■□□□ 1.42
HDAC11-205ENST00000404548 NKX2-3Q8TAU0 364 aa23.95■■□□□ 1.42
HDAC11-205ENST00000404548 RANBP2P49792 3224 aaKnown RBP23.95■■□□□ 1.42
HDAC11-205ENST00000404548 LDHCP07864 332 aa23.94■■□□□ 1.42
HDAC11-205ENST00000404548 PICALMQ13492 652 aa23.94■■□□□ 1.42
HDAC11-205ENST00000404548 NSUN4Q96CB9 384 aaKnown RBP23.94■■□□□ 1.42
HDAC11-205ENST00000404548 PTPRFP10586 1907 aa23.93■■□□□ 1.42
HDAC11-205ENST00000404548 SLAIN1Q8ND83 568 aa23.93■■□□□ 1.42
HDAC11-205ENST00000404548 NEUROD6Q96NK8 337 aa23.93■■□□□ 1.42
HDAC11-205ENST00000404548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.93■■□□□ 1.42
HDAC11-205ENST00000404548 PHIPQ8WWQ0 1821 aa23.92■■□□□ 1.42
HDAC11-205ENST00000404548 GORABQ5T7V8 394 aa23.92■■□□□ 1.42
HDAC11-205ENST00000404548 SHISA4Q96DD7 197 aa23.92■■□□□ 1.42
HDAC11-205ENST00000404548 TBC1D2Q9BYX2 928 aa23.92■■□□□ 1.42
HDAC11-205ENST00000404548 OSBPL5Q9H0X9 879 aaPredicted RBP23.92■■□□□ 1.42
HDAC11-205ENST00000404548 IGSF3O75054 1194 aa23.91■■□□□ 1.42
HDAC11-205ENST00000404548 MYCP01106 439 aaPredicted RBP23.91■■□□□ 1.42
HDAC11-205ENST00000404548 GJB1P08034 283 aa23.91■■□□□ 1.42
HDAC11-205ENST00000404548 UQCRFS1P1P0C7P4 283 aa23.91■■□□□ 1.42
HDAC11-205ENST00000404548 PRKCZQ05513 592 aa23.91■■□□□ 1.42
HDAC11-205ENST00000404548 MTFR1Q15390 333 aa23.91■■□□□ 1.42
HDAC11-205ENST00000404548 AGTPBP1Q9UPW5 1226 aa23.91■■□□□ 1.42
HDAC11-205ENST00000404548 PNMA6EA0A0J9YXQ4 647 aa23.9■■□□□ 1.42
HDAC11-205ENST00000404548 CAPN2P17655 700 aa23.9■■□□□ 1.42
HDAC11-205ENST00000404548 GJA8P48165 433 aa23.9■■□□□ 1.42
HDAC11-205ENST00000404548 UBXN2AP68543 259 aa23.9■■□□□ 1.42
HDAC11-205ENST00000404548 G3BP1Q13283 466 aaKnown RBP eCLIP23.9■■□□□ 1.42
HDAC11-205ENST00000404548 GADL1Q6ZQY3 521 aa23.9■■□□□ 1.42
HDAC11-205ENST00000404548 PROCA1Q8NCQ7 364 aaPredicted RBP23.9■■□□□ 1.42
HDAC11-205ENST00000404548 GPR108Q9NPR9 543 aa23.9■■□□□ 1.42
HDAC11-205ENST00000404548 TRIM75PA6NK02 468 aa23.89■■□□□ 1.41
HDAC11-205ENST00000404548 PI16Q6UXB8 463 aa23.89■■□□□ 1.41
HDAC11-205ENST00000404548 UBE2Q1Q7Z7E8 422 aa23.89■■□□□ 1.41
HDAC11-205ENST00000404548 SMCR8Q8TEV9 937 aaPredicted RBP23.89■■□□□ 1.41
HDAC11-205ENST00000404548 PNMA3Q9UL41 463 aa23.89■■□□□ 1.41
HDAC11-205ENST00000404548 MGAMO43451 1857 aa23.89■■□□□ 1.41
HDAC11-205ENST00000404548 CCL5P13501 91 aa23.88■■□□□ 1.41
HDAC11-205ENST00000404548 MCAMP43121 646 aa23.88■■□□□ 1.41
HDAC11-205ENST00000404548 IRF5Q13568 498 aa23.88■■□□□ 1.41
HDAC11-205ENST00000404548 PXYLP1Q8TE99 480 aa23.88■■□□□ 1.41
HDAC11-205ENST00000404548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.88■■□□□ 1.41
HDAC11-205ENST00000404548 RAI14Q9P0K7 980 aa23.88■■□□□ 1.41
HDAC11-205ENST00000404548 HERC5Q9UII4 1024 aaKnown RBP23.88■■□□□ 1.41
HDAC11-205ENST00000404548 BCAR3O75815 825 aa23.87■■□□□ 1.41
HDAC11-205ENST00000404548 ECM2O94769 699 aaPredicted RBP23.87■■□□□ 1.41
HDAC11-205ENST00000404548 SLURP2P0DP57 97 aa23.87■■□□□ 1.41
HDAC11-205ENST00000404548 TBC1D9Q6ZT07 1266 aa23.87■■□□□ 1.41
HDAC11-205ENST00000404548 FRAT1Q92837 279 aaPredicted RBP23.87■■□□□ 1.41
HDAC11-205ENST00000404548 POLA2Q14181 598 aa23.86■■□□□ 1.41
HDAC11-205ENST00000404548 FAM110CQ1W6H9 321 aa23.86■■□□□ 1.41
HDAC11-205ENST00000404548 RNF208Q9H0X6 261 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms