RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MYO1BO43795 1136 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 SLC10A3P09131 477 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 PRDX5P30044 214 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 NF2P35240 595 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 NOGQ13253 232 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 RASA3Q14644 834 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 DIXDC1Q155Q3 683 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 NBPF12Q5TAG4 269 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 CCDC102BQ68D86 513 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 RASAL3Q86YV0 1011 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 TNS4Q8IZW8 715 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 XAGE2Q96GT9 111 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 NEUROD6Q96NK8 337 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 SERPINA10Q9UK55 444 aa7.14□□□□□ -1.27
HMGB1P20-201ENST00000402555 FKBP1BP68106 108 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 ATP8B2P98198 1209 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 G3BP1Q13283 466 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 OS9Q13438 667 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 RASGRF1Q13972 1273 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 IFFO2Q5TF58 517 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 PI16Q6UXB8 463 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 WDR66Q8TBY9 1149 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 SSH3Q8TE77 659 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 TEKT1Q969V4 418 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 CCDC102AQ96A19 550 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 CLMNQ96JQ2 1002 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 BEGAINQ9BUH8 593 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 TMEM39BQ9GZU3 492 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 GNL3LQ9NVN8 582 aaKnown RBP7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 RCAN3Q9UKA8 241 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 ANGEL1Q9UNK9 670 aaKnown RBP7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 CASP8AP2Q9UKL3 1982 aa7.13□□□□□ -1.27
HMGB1P20-201ENST00000402555 PPP1R3GB7ZBB8 358 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 SURF6O75683 361 aaKnown RBP7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 LDHBP07195 334 aaKnown RBP7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 HDLBPQ00341 1268 aaKnown RBP7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 C20orf194Q5TEA3 1177 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 APOBEC3HQ6NTF7 200 aaKnown RBP7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 TYW1BQ6NUM6 668 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 CEP85Q6P2H3 762 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 ARMC9Q7Z3E5 817 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 ZDHHC15Q96MV8 337 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 CSRNP1Q96S65 589 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 PRDM10Q9NQV6 1147 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 PLA2G2EQ9NZK7 142 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 DENND2AQ9ULE3 1009 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 AKAP2Q9Y2D5 859 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 COG6Q9Y2V7 657 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 DAGLAQ9Y4D2 1042 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 PPP2R3BQ9Y5P8 575 aa7.12□□□□□ -1.27
HMGB1P20-201ENST00000402555 MAST3O60307 1309 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 SALL1Q9NSC2 1324 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 DPYSL4O14531 572 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 SEMA3EO15041 775 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 PPP1R12BO60237 982 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 USP2O75604 605 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 TRPA1O75762 1119 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 TNFAIP1Q13829 316 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 MVPQ14764 893 aaKnown RBP7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 SUPT20HL1Q3ZLR7 823 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 TNNI3KQ59H18 835 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 LDLRAD1Q5T700 205 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 GORABQ5T7V8 394 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 HHIPL2Q6UWX4 724 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 TBC1D9Q6ZT07 1266 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 SPRYD3Q8NCJ5 442 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 YTHDC1Q96MU7 727 aaKnown RBP7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 TEPSINQ96N21 525 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 DBNDD2Q9BQY9 259 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 SNRKQ9NRH2 765 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 RNF186Q9NXI6 227 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 TLR7Q9NYK1 1049 aaKnown RBP7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 HMG20BQ9P0W2 317 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 ABCF2Q9UG63 623 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 EXOC6BQ9Y2D4 811 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 SUGT1Q9Y2Z0 365 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 FPGT-TNNI3KV9GXZ4 949 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 OTOFQ9HC10 1997 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 AKAP11Q9UKA4 1901 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 MYH2Q9UKX2 1941 aa7.11□□□□□ -1.27
HMGB1P20-201ENST00000402555 MCAMP43121 646 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 IREB2P48200 963 aaKnown RBP7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 TNNI2P48788 182 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 TCP10Q12799 353 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 NFIAQ12857 509 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 MAP3K11Q16584 847 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 SPRYD7Q5W111 196 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 CDC42EP5Q6NZY7 148 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 SPATA5Q8NB90 893 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 ZNF384Q8TF68 577 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 SLC10A4Q96EP9 437 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 MRIQ9BWK5 157 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 CCDC8Q9H0W5 538 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 BCL11AQ9H165 835 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 TMOD2Q9NZR1 351 aa7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 NOP58Q9Y2X3 529 aaKnown RBP7.1□□□□□ -1.27
HMGB1P20-201ENST00000402555 AK9Q5TCS8 1911 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 PDS5AQ29RF7 1337 aaKnown RBP7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 APBB1O00213 710 aa7.09□□□□□ -1.27
HMGB1P20-201ENST00000402555 CA12O43570 354 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms