RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 DIS3L2Q8IYB7 885 aaKnown RBP10.49□□□□□ -0.73
HPS4-203ENST00000402105 KLHL34Q8N239 644 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.49□□□□□ -0.73
HPS4-203ENST00000402105 RABEP2Q9H5N1 569 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 CDKL5O76039 1030 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 RGPD1P0DJD0 1748 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 AKAP17AQ02040 695 aaKnown RBP10.49□□□□□ -0.73
HPS4-203ENST00000402105 DIP2AQ14689 1571 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 CCDC93Q567U6 631 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 JAKMIP3Q5VZ66 844 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 SPECC1LQ69YQ0 1117 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 CC2D1AQ6P1N0 951 aaPredicted RBP10.49□□□□□ -0.73
HPS4-203ENST00000402105 KRI1Q8N9T8 703 aaKnown RBP10.49□□□□□ -0.73
HPS4-203ENST00000402105 RASSF8Q8NHQ8 419 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 APPBP2Q92624 585 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 GOLGA1Q92805 767 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 NAPBQ9H115 298 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 ADGRL3Q9HAR2 1447 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 RGPD8O14715 1765 aaPredicted RBP10.49□□□□□ -0.73
HPS4-203ENST00000402105 TDO2P48775 406 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 POSTNQ15063 836 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 RABL6Q3YEC7 729 aaPredicted RBP10.49□□□□□ -0.73
HPS4-203ENST00000402105 TOM1L2Q6ZVM7 507 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 MB21D2Q8IYB1 491 aaPredicted RBP10.49□□□□□ -0.73
HPS4-203ENST00000402105 MIGA1Q8NAN2 632 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 PDE11AQ9HCR9 933 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 RAI14Q9P0K7 980 aa10.49□□□□□ -0.73
HPS4-203ENST00000402105 SALL1Q9NSC2 1324 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 TRIM66O15016 1216 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 KIF5CO60282 957 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 CAPN2P17655 700 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 ZSCAN26Q16670 478 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 IGSF22Q8N9C0 903 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 MRPL44Q9H9J2 332 aaKnown RBP10.48□□□□□ -0.73
HPS4-203ENST00000402105 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.48□□□□□ -0.73
HPS4-203ENST00000402105 MAN1B1Q9UKM7 699 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 BMP6P22004 513 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 CHMP4BP1P59074 171 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 RAD51AP2Q09MP3 1159 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 FKBP15Q5T1M5 1219 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 APOA5Q6Q788 366 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 AK7Q96M32 723 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 CDC5LQ99459 802 aaKnown RBP10.48□□□□□ -0.73
HPS4-203ENST00000402105 VPS16Q9H269 839 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 HSD3B7Q9H2F3 369 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 TBC1D2BQ9UPU7 963 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 PCDHB6Q9Y5E3 794 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 PHLPP2Q6ZVD8 1323 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 ZNF532Q9HCE3 1301 aa10.48□□□□□ -0.73
HPS4-203ENST00000402105 IKBKBO14920 756 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 CCDC175P0C221 793 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 LONRF2Q1L5Z9 754 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 TRIM22Q8IYM9 498 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 BLZF1Q9H2G9 400 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 ARMT1Q9H993 441 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 AKAP2Q9Y2D5 859 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 NWD1Q149M9 1564 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 SETD1AO15047 1707 aaKnown RBP10.47□□□□□ -0.73
HPS4-203ENST00000402105 H7C1W4 665 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 PRDM1O75626 825 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 TBC1D8O95759 1140 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 DCAF5Q96JK2 942 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 NUP88Q99567 741 aaPredicted RBP10.47□□□□□ -0.73
HPS4-203ENST00000402105 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.47□□□□□ -0.73
HPS4-203ENST00000402105 SRRTQ9BXP5 876 aaKnown RBP10.47□□□□□ -0.73
HPS4-203ENST00000402105 INTS13Q9NVM9 706 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 PIK3C2AO00443 1686 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 ERICH2A1L162 156 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 AKR1B15C9JRZ8 316 aaPredicted RBP10.47□□□□□ -0.73
HPS4-203ENST00000402105 N4BP1O75113 896 aaKnown RBP10.47□□□□□ -0.73
HPS4-203ENST00000402105 TPM1P09493 284 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 CDC25AP30304 524 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 PPARDQ03181 441 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 RBL2Q08999 1139 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 HSP90B2PQ58FF3 399 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 LEKR1Q6ZMV7 388 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 ACRBPQ8NEB7 543 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 CAPZA3Q96KX2 299 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 WWC3Q9ULE0 1092 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 ANKARQ7Z5J8 1434 aa10.47□□□□□ -0.73
HPS4-203ENST00000402105 PRKAB2O43741 272 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 EPSTI1Q96J88 318 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 MPHOSPH8Q99549 860 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 AGXT2Q9BYV1 514 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 C19orf44Q9H6X5 657 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 PALLDQ8WX93 1383 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 FAM205CA6NFA0 338 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 ZMYND10O75800 440 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 MCAMP43121 646 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 TXLNBQ8N3L3 684 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 GPR161Q8N6U8 529 aaKnown RBP10.46□□□□□ -0.73
HPS4-203ENST00000402105 MAGEB6Q8N7X4 407 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 RGS22Q8NE09 1264 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 OXER1Q8TDS5 423 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 BPIFA3Q9BQP9 254 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 ZSWIM5Q9P217 1185 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 ABCF2Q9UG63 623 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 RSPH14Q9UHP6 348 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 ADAM21Q9UKJ8 722 aa10.46□□□□□ -0.73
HPS4-203ENST00000402105 TUBGCP6Q96RT7 1819 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms