RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PSMA5P28066 241 aa25.16■■□□□ 1.62
CPNE1-204ENST00000397443 SLC4A3P48751 1232 aa25.16■■□□□ 1.62
CPNE1-204ENST00000397443 GIMAP6Q6P9H5 292 aa25.16■■□□□ 1.62
CPNE1-204ENST00000397443 NOL8Q76FK4 1167 aaKnown RBP25.16■■□□□ 1.62
CPNE1-204ENST00000397443 IL17RAQ96F46 866 aa25.16■■□□□ 1.62
CPNE1-204ENST00000397443 NEK1Q96PY6 1258 aa25.16■■□□□ 1.62
CPNE1-204ENST00000397443 DLGAP5Q15398 846 aa25.15■■□□□ 1.62
CPNE1-204ENST00000397443 RBM26Q5T8P6 1007 aaKnown RBP25.15■■□□□ 1.62
CPNE1-204ENST00000397443 WDHD1O75717 1129 aaPredicted RBP25.14■■□□□ 1.62
CPNE1-204ENST00000397443 BLOC1S2Q6QNY1 142 aa25.14■■□□□ 1.62
CPNE1-204ENST00000397443 DDX4Q9NQI0 724 aaKnown RBP25.14■■□□□ 1.62
CPNE1-204ENST00000397443 MKRN1Q9UHC7 482 aaKnown RBP25.14■■□□□ 1.62
CPNE1-204ENST00000397443 CYP46A1Q9Y6A2 500 aa25.14■■□□□ 1.62
CPNE1-204ENST00000397443 NFIAQ12857 509 aa25.14■■□□□ 1.61
CPNE1-204ENST00000397443 MICALL2Q8IY33 904 aa25.14■■□□□ 1.61
CPNE1-204ENST00000397443 TOMM22Q9NS69 142 aa25.14■■□□□ 1.61
CPNE1-204ENST00000397443 LAMA4Q16363 1823 aa25.14■■□□□ 1.61
CPNE1-204ENST00000397443 NAV1Q8NEY1 1877 aa25.13■■□□□ 1.61
CPNE1-204ENST00000397443 SPDYE2BA6NHP3 402 aa25.13■■□□□ 1.61
CPNE1-204ENST00000397443 ST18O60284 1047 aa25.13■■□□□ 1.61
CPNE1-204ENST00000397443 SPDYE6P0CI01 402 aa25.13■■□□□ 1.61
CPNE1-204ENST00000397443 RPS12P25398 132 aaKnown RBP25.13■■□□□ 1.61
CPNE1-204ENST00000397443 RUFY3Q7L099 469 aa25.13■■□□□ 1.61
CPNE1-204ENST00000397443 ZSWIM6Q9HCJ5 1215 aa25.13■■□□□ 1.61
CPNE1-204ENST00000397443 TIAM2Q8IVF5 1701 aa25.12■■□□□ 1.61
CPNE1-204ENST00000397443 CLRN2A0PK11 232 aa25.12■■□□□ 1.61
CPNE1-204ENST00000397443 GRIN3BO60391 1043 aa25.12■■□□□ 1.61
CPNE1-204ENST00000397443 POLR3DP05423 398 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-204ENST00000397443 TCP10Q12799 353 aa25.12■■□□□ 1.61
CPNE1-204ENST00000397443 CHST3Q7LGC8 479 aa25.12■■□□□ 1.61
CPNE1-204ENST00000397443 TBC1D2Q9BYX2 928 aa25.12■■□□□ 1.61
CPNE1-204ENST00000397443 TM6SF1Q9BZW5 370 aa25.12■■□□□ 1.61
CPNE1-204ENST00000397443 MYOZ2Q9NPC6 264 aa25.12■■□□□ 1.61
CPNE1-204ENST00000397443 ARPP21Q9UBL0 812 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-204ENST00000397443 CNOT7Q9UIV1 285 aaKnown RBP25.12■■□□□ 1.61
CPNE1-204ENST00000397443 TACC3Q9Y6A5 838 aa25.12■■□□□ 1.61
CPNE1-204ENST00000397443 RRP12Q5JTH9 1297 aaKnown RBP25.12■■□□□ 1.61
CPNE1-204ENST00000397443 LARP6Q9BRS8 491 aaKnown RBP25.12■■□□□ 1.61
CPNE1-204ENST00000397443 NEDD4P46934 1319 aa25.11■■□□□ 1.61
CPNE1-204ENST00000397443 RALYLQ86SE5 291 aaKnown RBP25.11■■□□□ 1.61
CPNE1-204ENST00000397443 HSCBQ8IWL3 235 aa25.11■■□□□ 1.61
CPNE1-204ENST00000397443 IPO9Q96P70 1041 aaKnown RBP25.11■■□□□ 1.61
CPNE1-204ENST00000397443 LRRC2Q9BYS8 371 aa25.11■■□□□ 1.61
CPNE1-204ENST00000397443 PDRG1Q9NUG6 133 aa25.11■■□□□ 1.61
CPNE1-204ENST00000397443 ECM29Q5VYK3 1845 aa25.11■■□□□ 1.61
CPNE1-204ENST00000397443 DDNO94850 711 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-204ENST00000397443 EGFRP00533 1210 aa25.1■■□□□ 1.61
CPNE1-204ENST00000397443 RPS6KB1P23443 525 aa25.1■■□□□ 1.61
CPNE1-204ENST00000397443 TRDNQ13061 729 aa25.1■■□□□ 1.61
CPNE1-204ENST00000397443 AKNAD1Q5T1N1 836 aa25.1■■□□□ 1.61
CPNE1-204ENST00000397443 MFSD6Q6ZSS7 791 aa25.1■■□□□ 1.61
CPNE1-204ENST00000397443 SAMD7Q7Z3H4 446 aa25.1■■□□□ 1.61
CPNE1-204ENST00000397443 AMOTL1Q8IY63 956 aa25.1■■□□□ 1.61
CPNE1-204ENST00000397443 BECN1Q14457 450 aa25.1■■□□□ 1.61
CPNE1-204ENST00000397443 TBC1D10BQ4KMP7 808 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-204ENST00000397443 GPC2Q8N158 579 aa25.1■■□□□ 1.61
CPNE1-204ENST00000397443 NCOA7Q8NI08 942 aa25.1■■□□□ 1.61
CPNE1-204ENST00000397443 NKX2-3Q8TAU0 364 aa25.1■■□□□ 1.61
CPNE1-204ENST00000397443 MYH1P12882 1939 aa25.09■■□□□ 1.61
CPNE1-204ENST00000397443 B4E1Z4 1266 aa25.09■■□□□ 1.61
CPNE1-204ENST00000397443 PRDM1O75626 825 aa25.09■■□□□ 1.61
CPNE1-204ENST00000397443 PLCD1P51178 756 aa25.09■■□□□ 1.61
CPNE1-204ENST00000397443 NBPF9Q3BBW0 867 aa25.09■■□□□ 1.61
CPNE1-204ENST00000397443 ZFPM1Q8IX07 1006 aa25.09■■□□□ 1.61
CPNE1-204ENST00000397443 DPF2Q92785 391 aa25.09■■□□□ 1.61
CPNE1-204ENST00000397443 DYNLL2Q96FJ2 89 aa25.09■■□□□ 1.61
CPNE1-204ENST00000397443 FOCADQ5VW36 1801 aa25.08■■□□□ 1.61
CPNE1-204ENST00000397443 SBK1Q52WX2 424 aa25.08■■□□□ 1.61
CPNE1-204ENST00000397443 C12orf60Q5U649 245 aa25.08■■□□□ 1.61
CPNE1-204ENST00000397443 VEZTQ9HBM0 779 aa25.08■■□□□ 1.61
CPNE1-204ENST00000397443 DAXXQ9UER7 740 aaPredicted RBP25.08■■□□□ 1.61
CPNE1-204ENST00000397443 LAMB1P07942 1786 aa25.08■■□□□ 1.61
CPNE1-204ENST00000397443 TCP10L2B9ZVM9 353 aa25.08■■□□□ 1.6
CPNE1-204ENST00000397443 WNT10BO00744 389 aa25.08■■□□□ 1.6
CPNE1-204ENST00000397443 AK2P54819 239 aa25.08■■□□□ 1.6
CPNE1-204ENST00000397443 STAG1Q8WVM7 1258 aa25.08■■□□□ 1.6
CPNE1-204ENST00000397443 TTC14Q96N46 770 aa25.08■■□□□ 1.6
CPNE1-204ENST00000397443 ANAPC4Q9UJX5 808 aa25.08■■□□□ 1.6
CPNE1-204ENST00000397443 ZNF280AP59817 542 aaPredicted RBP25.07■■□□□ 1.6
CPNE1-204ENST00000397443 SNX21Q969T3 373 aa25.07■■□□□ 1.6
CPNE1-204ENST00000397443 OSBPL5Q9H0X9 879 aaPredicted RBP25.07■■□□□ 1.6
CPNE1-204ENST00000397443 TMOD2Q9NZR1 351 aa25.07■■□□□ 1.6
CPNE1-204ENST00000397443 ZNF70Q9UC06 446 aaPredicted RBP25.07■■□□□ 1.6
CPNE1-204ENST00000397443 FAM198AQ9UFP1 575 aa25.07■■□□□ 1.6
CPNE1-204ENST00000397443 DHX32Q7L7V1 743 aaKnown RBP25.06■■□□□ 1.6
CPNE1-204ENST00000397443 RNF41Q9H4P4 317 aaPredicted RBP25.06■■□□□ 1.6
CPNE1-204ENST00000397443 KDM4AO75164 1064 aa25.06■■□□□ 1.6
CPNE1-204ENST00000397443 HMGB1P09429 215 aaKnown RBP25.06■■□□□ 1.6
CPNE1-204ENST00000397443 FGD1P98174 961 aa25.06■■□□□ 1.6
CPNE1-204ENST00000397443 ZSCAN29Q8IWY8 852 aaPredicted RBP25.06■■□□□ 1.6
CPNE1-204ENST00000397443 SPRYD3Q8NCJ5 442 aa25.06■■□□□ 1.6
CPNE1-204ENST00000397443 SCAF8Q9UPN6 1271 aaKnown RBP25.06■■□□□ 1.6
CPNE1-204ENST00000397443 H7C1D1 291 aa25.05■■□□□ 1.6
CPNE1-204ENST00000397443 MYO1BO43795 1136 aa25.05■■□□□ 1.6
CPNE1-204ENST00000397443 SLC3A2P08195 630 aaKnown RBP25.05■■□□□ 1.6
CPNE1-204ENST00000397443 MB21D2Q8IYB1 491 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-204ENST00000397443 MTMR14Q8NCE2 650 aa25.05■■□□□ 1.6
CPNE1-204ENST00000397443 SLC44A5Q8NCS7 719 aa25.05■■□□□ 1.6
CPNE1-204ENST00000397443 IDI2Q9BXS1 227 aa25.05■■□□□ 1.6
CPNE1-204ENST00000397443 GPRC5DQ9NZD1 345 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms