RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 PPP1R7Q15435 360 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 WHAMMP3Q1A5X7 153 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 TSR2Q969E8 191 aaKnown RBP9.05□□□□□ -0.96
SOX6-202ENST00000396356 SLC12A5Q9H2X9 1139 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 ERICH4A6NGS2 130 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 ASIC1P78348 528 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 IRX3P78415 501 aaPredicted RBP9.05□□□□□ -0.96
SOX6-202ENST00000396356 ARHGAP4P98171 946 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 TYRO3Q06418 890 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 KSR2Q6VAB6 950 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 DTHD1Q6ZMT9 781 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 RPUSD2Q8IZ73 545 aaKnown RBP9.05□□□□□ -0.96
SOX6-202ENST00000396356 RETREG2Q8NC44 543 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 IDEP14735 1019 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 PPP1R9BQ96SB3 815 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 YEATS2Q9ULM3 1422 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 RIMS2Q9UQ26 1411 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 CUTAO60888 179 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 TPD52P55327 224 aaPredicted RBP9.05□□□□□ -0.96
SOX6-202ENST00000396356 PRPF4BQ13523 1007 aaKnown RBP9.05□□□□□ -0.96
SOX6-202ENST00000396356 MCUR1Q96AQ8 359 aa9.05□□□□□ -0.96
SOX6-202ENST00000396356 EDC4Q6P2E9 1401 aaKnown RBP9.05□□□□□ -0.96
SOX6-202ENST00000396356 FOXP2O15409 715 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 NSMCE1Q8WV22 266 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 GFM2Q969S9 779 aaKnown RBP9.04□□□□□ -0.96
SOX6-202ENST00000396356 UBA5Q9GZZ9 404 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 TRIM35Q9UPQ4 493 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 ASXL2Q76L83 1435 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 IPO5O00410 1097 aaKnown RBP9.04□□□□□ -0.96
SOX6-202ENST00000396356 NUTM2GQ5VZR2 741 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 MAP3K5Q99683 1374 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 RNF40O75150 1001 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 A2MP01023 1474 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 ARHGEF10O15013 1369 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 KRT10P13645 584 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 ATRIPQ8WXE1 791 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 PLCH2O75038 1416 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 GRM8O00222 908 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 ADAMTS12P58397 1594 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 CHMP4BP1P59074 171 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 C8orf74Q6P047 294 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 SV2BQ7L1I2 683 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 KRT25Q7Z3Z0 450 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 ESYT1Q9BSJ8 1104 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 CNOT10Q9H9A5 744 aaKnown RBP9.04□□□□□ -0.96
SOX6-202ENST00000396356 SLC5A4Q9NY91 659 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 IPO11Q9UI26 975 aaKnown RBP9.04□□□□□ -0.96
SOX6-202ENST00000396356 PHF8Q9UPP1 1060 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 CARMIL3Q8ND23 1372 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 NPATQ14207 1427 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 PCDH11XQ9BZA7 1347 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 PCDH11YQ9BZA8 1340 aa9.04□□□□□ -0.96
SOX6-202ENST00000396356 SMARCC2Q8TAQ2 1214 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 BAG1Q99933 345 aaPredicted RBP9.03□□□□□ -0.96
SOX6-202ENST00000396356 BCAR3O75815 825 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 ALG1Q9BT22 464 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 GPATCH8Q9UKJ3 1502 aaKnown RBP9.03□□□□□ -0.96
SOX6-202ENST00000396356 MINDY4BA8MYZ0 360 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 PPP4R1Q8TF05 950 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 TSC1Q92574 1164 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 RNF216Q9NWF9 866 aaPredicted RBP9.03□□□□□ -0.96
SOX6-202ENST00000396356 ANGPTL3Q9Y5C1 460 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 TNRQ92752 1358 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 ATP2B3Q16720 1220 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 ANKRD13DQ6ZTN6 518 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 CEP120Q8N960 986 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 DCTPP1Q9H773 170 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 MID2Q9UJV3 735 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 BPIFB4P59827 614 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 AKAP4Q5JQC9 854 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 DENND2AQ9ULE3 1009 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 EXOC6BQ9Y2D4 811 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 POLR2BP30876 1174 aaKnown RBP9.03□□□□□ -0.96
SOX6-202ENST00000396356 ZNF445P59923 1031 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 ITIH3Q06033 890 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 ATP8B2P98198 1209 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 CAMK4Q16566 473 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 SLC4A8Q2Y0W8 1093 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 RHPN1Q8TCX5 695 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 WDR62O43379 1518 aa9.03□□□□□ -0.96
SOX6-202ENST00000396356 EXOC5O00471 708 aa9.02□□□□□ -0.96
SOX6-202ENST00000396356 PDE1AP54750 535 aa9.02□□□□□ -0.96
SOX6-202ENST00000396356 CDC37L1Q7L3B6 337 aa9.02□□□□□ -0.96
SOX6-202ENST00000396356 SDCCAG3Q96C92 435 aa9.02□□□□□ -0.96
SOX6-202ENST00000396356 MRPL40Q9NQ50 206 aaKnown RBP9.02□□□□□ -0.96
SOX6-202ENST00000396356 PLEKHG1Q9ULL1 1385 aa9.02□□□□□ -0.96
SOX6-202ENST00000396356 AOC3Q16853 763 aa9.02□□□□□ -0.96
SOX6-202ENST00000396356 SAMM50Q9Y512 469 aa9.02□□□□□ -0.96
SOX6-202ENST00000396356 TRAPPC10P48553 1259 aa9.02□□□□□ -0.97
SOX6-202ENST00000396356 CDC37Q16543 378 aaPredicted RBP9.02□□□□□ -0.97
SOX6-202ENST00000396356 AFAP1Q8N556 730 aa9.02□□□□□ -0.97
SOX6-202ENST00000396356 EPS15L1Q9UBC2 864 aa9.02□□□□□ -0.97
SOX6-202ENST00000396356 BIN2Q9UBW5 565 aaPredicted RBP9.02□□□□□ -0.97
SOX6-202ENST00000396356 CCDC169A6NNP5 214 aa9.02□□□□□ -0.97
SOX6-202ENST00000396356 RNF113AO15541 343 aaKnown RBP9.02□□□□□ -0.97
SOX6-202ENST00000396356 GFAPP14136 432 aa9.02□□□□□ -0.97
SOX6-202ENST00000396356 UBXN1Q04323 297 aa9.02□□□□□ -0.97
SOX6-202ENST00000396356 NR1H3Q13133 447 aa9.02□□□□□ -0.97
SOX6-202ENST00000396356 TMC4Q7Z404 712 aa9.02□□□□□ -0.97
SOX6-202ENST00000396356 CCDC144CPQ8IYA2 1237 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms