RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 IFNAR1P17181 557 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 U2AF2P26368 475 aaKnown RBP eCLIP17.81■□□□□ 0.443e-9■■■□□ 15
UBE2D3-207ENST00000394801 SLC39A14Q15043 492 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 AXDND1Q5T1B0 1012 aaPredicted RBP17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 MIGA1Q8NAN2 632 aa17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 FAM84BQ96KN1 310 aaPredicted RBP17.81■□□□□ 0.44
UBE2D3-207ENST00000394801 SART3Q15020 963 aaKnown RBP17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 VPS37DQ86XT2 251 aa17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 FNBP4Q8N3X1 1017 aaPredicted RBP17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 NGLY1Q96IV0 654 aa17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 RIOK1Q9BRS2 568 aaKnown RBP17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 COL1A1P02452 1464 aaPredicted RBP17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 WTIPA6NIX2 430 aaPredicted RBP17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 SEMA3EO15041 775 aa17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 FMNL1O95466 1100 aaPredicted RBP17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 TAF1P21675 1872 aa17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 CMA1P23946 247 aa17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 NDUFA8P51970 172 aa17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 KCNQ4P56696 695 aa17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 PPARAQ07869 468 aa17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 FBXO33Q7Z6M2 555 aa17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 CELF1Q92879 486 aaKnown RBP17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 ANO10Q9NW15 660 aa17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 ABCF2Q9UG63 623 aa17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 IQSEC3Q9UPP2 1182 aaPredicted RBP17.8■□□□□ 0.44
UBE2D3-207ENST00000394801 CACNA1SQ13698 1873 aa17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 MAGEB6P1A0A0J9YX57 407 aa17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 A0A1B0GVL5 298 aa17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 MYL10Q9BUA6 226 aa17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 PDS5AQ29RF7 1337 aaKnown RBP17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 GTF2E1P29083 439 aaPredicted RBP17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 ZNF75DP51815 510 aa17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 RPS8P62241 208 aaKnown RBP17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 SSRP1Q08945 709 aaKnown RBP17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 NOLC1Q14978 699 aaKnown RBP eCLIP17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 WTAPQ15007 396 aa17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 SARM1Q6SZW1 724 aa17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 PTF1AQ7RTS3 328 aa17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 CCDC144CPQ8IYA2 1237 aa17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 SPTLC3Q9NUV7 552 aa17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 RAI14Q9P0K7 980 aa17.79■□□□□ 0.44
UBE2D3-207ENST00000394801 COL24A1Q17RW2 1714 aa17.78■□□□□ 0.44
UBE2D3-207ENST00000394801 ZBTB22O15209 634 aa17.78■□□□□ 0.44
UBE2D3-207ENST00000394801 PPP6R2O75170 966 aa17.78■□□□□ 0.44
UBE2D3-207ENST00000394801 BICDL1Q6ZP65 573 aa17.78■□□□□ 0.44
UBE2D3-207ENST00000394801 C11orf57Q6ZUT1 292 aaPredicted RBP17.78■□□□□ 0.44
UBE2D3-207ENST00000394801 WASF1Q92558 559 aa17.78■□□□□ 0.44
UBE2D3-207ENST00000394801 C8orf37Q96NL8 207 aa17.78■□□□□ 0.44
UBE2D3-207ENST00000394801 NLRP3Q96P20 1036 aa17.78■□□□□ 0.44
UBE2D3-207ENST00000394801 SETDB2Q96T68 719 aa17.78■□□□□ 0.44
UBE2D3-207ENST00000394801 KCNF1Q9H3M0 494 aa17.78■□□□□ 0.44
UBE2D3-207ENST00000394801 SDF4Q9BRK5 362 aa17.77■□□□□ 0.44
UBE2D3-207ENST00000394801 ECM29Q5VYK3 1845 aa17.77■□□□□ 0.44
UBE2D3-207ENST00000394801 ERICH2A1L162 156 aa17.77■□□□□ 0.44
UBE2D3-207ENST00000394801 TRIM29Q14134 588 aa17.77■□□□□ 0.44
UBE2D3-207ENST00000394801 PTPAQ15257 358 aa17.77■□□□□ 0.44
UBE2D3-207ENST00000394801 RRP12Q5JTH9 1297 aaKnown RBP17.77■□□□□ 0.44
UBE2D3-207ENST00000394801 SPC24Q8NBT2 197 aa17.77■□□□□ 0.44
UBE2D3-207ENST00000394801 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.77■□□□□ 0.44
UBE2D3-207ENST00000394801 BRIP1Q9BX63 1249 aa17.77■□□□□ 0.44
UBE2D3-207ENST00000394801 TRIM5Q9C035 493 aa17.77■□□□□ 0.44
UBE2D3-207ENST00000394801 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.77■□□□□ 0.44
UBE2D3-207ENST00000394801 R3HCC1Q9Y3T6 440 aaKnown RBP17.77■□□□□ 0.44
UBE2D3-207ENST00000394801 CCDC196A0A1B0GTZ2 297 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 CDC25BP30305 580 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 KIAA1524Q8TCG1 905 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 ZNF384Q8TF68 577 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 SDR42E1Q8WUS8 393 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 MAP3K14Q99558 947 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 SLC26A6Q9BXS9 759 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 KIAA1468Q9P260 1216 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 FAM237AA0A1B0GTK4 181 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 GOLGA6L19H0YKK7 550 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 WDHD1O75717 1129 aaPredicted RBP17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 FGRP09769 529 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 PPP2R5BQ15173 497 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 RTN1Q16799 776 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 NBPF11Q86T75 865 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 ANKRD2Q9GZV1 360 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 TOMM22Q9NS69 142 aa17.76■□□□□ 0.43
UBE2D3-207ENST00000394801 ZNF202O95125 648 aa17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 SEC23AQ15436 765 aa17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 TPTE2Q6XPS3 522 aa17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 SMIM5Q71RC9 77 aa17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 JMYQ8N9B5 988 aa17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 ESR2Q92731 530 aa17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 TIGD1Q96MW7 591 aa17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 ZKSCAN3Q9BRR0 538 aa17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 SRP68Q9UHB9 627 aaKnown RBP17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 BTAF1O14981 1849 aa17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 ZPR1O75312 459 aa17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 PCP11498 1178 aaKnown RBP17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 TMED8Q6PL24 325 aaPredicted RBP17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 NBPF5PQ86XG9 351 aaPredicted RBP17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 DHX40Q8IX18 779 aaKnown RBP17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 CRACR2BQ8N4Y2 399 aaPredicted RBP17.75■□□□□ 0.43
UBE2D3-207ENST00000394801 MINDY4BA8MYZ0 360 aa17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 TRIM22Q8IYM9 498 aa17.74■□□□□ 0.43
UBE2D3-207ENST00000394801 CEP57L1Q8IYX8 460 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms