RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 AFAP1L1Q8TED9 768 aa24.89■■□□□ 1.57
CLDND1-202ENST00000394180 PHAXQ9H814 394 aaKnown RBP24.89■■□□□ 1.57
CLDND1-202ENST00000394180 JAK2O60674 1132 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 PFKFB2O60825 505 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 YEATS4O95619 227 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 MCM3P25205 808 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 DDR1Q08345 913 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 WDR93Q6P2C0 686 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 HSD3B7Q9H2F3 369 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 KCPQ6ZWJ8 1503 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 PAPPAQ13219 1627 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 ALDH1L1O75891 902 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 SNRPA1P09661 255 aaKnown RBP24.88■■□□□ 1.57
CLDND1-202ENST00000394180 MYL5Q02045 173 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 PROSER3Q2NL68 480 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 ABCB6Q9NP58 842 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 PCDHA7Q9UN72 937 aa24.88■■□□□ 1.57
CLDND1-202ENST00000394180 SETQ01105 290 aaPredicted RBP24.87■■□□□ 1.57
CLDND1-202ENST00000394180 HNRNPH1P31943 449 aaKnown RBP24.86■■□□□ 1.57
CLDND1-202ENST00000394180 PIP4K2AP48426 406 aaPredicted RBP24.86■■□□□ 1.57
CLDND1-202ENST00000394180 CNPY4Q8N129 248 aa24.86■■□□□ 1.57
CLDND1-202ENST00000394180 FAM204AQ9H8W3 233 aa24.86■■□□□ 1.57
CLDND1-202ENST00000394180 TUBE1Q9UJT0 475 aa24.86■■□□□ 1.57
CLDND1-202ENST00000394180 UBR2Q8IWV8 1755 aa24.86■■□□□ 1.57
CLDND1-202ENST00000394180 DTNBO60941 627 aa24.86■■□□□ 1.57
CLDND1-202ENST00000394180 TTLL5Q6EMB2 1281 aa24.86■■□□□ 1.57
CLDND1-202ENST00000394180 PRR29P0C7W0 189 aa24.85■■□□□ 1.57
CLDND1-202ENST00000394180 CALRP27797 417 aaKnown RBP24.85■■□□□ 1.57
CLDND1-202ENST00000394180 TDO2P48775 406 aa24.85■■□□□ 1.57
CLDND1-202ENST00000394180 PTF1AQ7RTS3 328 aa24.85■■□□□ 1.57
CLDND1-202ENST00000394180 CCDC12Q8WUD4 166 aaPredicted RBP24.85■■□□□ 1.57
CLDND1-202ENST00000394180 BICC1Q9H694 974 aaKnown RBP24.85■■□□□ 1.57
CLDND1-202ENST00000394180 A6NNZ2 444 aa24.85■■□□□ 1.57
CLDND1-202ENST00000394180 SERPINC1P01008 464 aa24.85■■□□□ 1.57
CLDND1-202ENST00000394180 NMIQ13287 307 aaPredicted RBP24.85■■□□□ 1.57
CLDND1-202ENST00000394180 WHAMMP3Q1A5X7 153 aa24.85■■□□□ 1.57
CLDND1-202ENST00000394180 TUBB8Q3ZCM7 444 aa24.85■■□□□ 1.57
CLDND1-202ENST00000394180 WDHD1O75717 1129 aaPredicted RBP24.84■■□□□ 1.57
CLDND1-202ENST00000394180 HMGB1P09429 215 aaKnown RBP24.84■■□□□ 1.57
CLDND1-202ENST00000394180 MNAT1P51948 309 aa24.84■■□□□ 1.57
CLDND1-202ENST00000394180 ZNF772Q68DY9 489 aaPredicted RBP24.84■■□□□ 1.57
CLDND1-202ENST00000394180 CCDC102AQ96A19 550 aa24.84■■□□□ 1.57
CLDND1-202ENST00000394180 N4BP1O75113 896 aaKnown RBP24.84■■□□□ 1.57
CLDND1-202ENST00000394180 PRPF6O94906 941 aaKnown RBP24.84■■□□□ 1.57
CLDND1-202ENST00000394180 NEK1Q96PY6 1258 aa24.84■■□□□ 1.57
CLDND1-202ENST00000394180 NAA15Q9BXJ9 866 aaKnown RBP24.84■■□□□ 1.57
CLDND1-202ENST00000394180 LMOD1P29536 600 aaPredicted RBP24.83■■□□□ 1.57
CLDND1-202ENST00000394180 STK3Q13188 491 aa24.83■■□□□ 1.57
CLDND1-202ENST00000394180 CFAP100Q494V2 611 aa24.83■■□□□ 1.57
CLDND1-202ENST00000394180 SPATS2Q86XZ4 545 aaKnown RBP24.83■■□□□ 1.57
CLDND1-202ENST00000394180 NSUN7Q8NE18 718 aaKnown RBP24.83■■□□□ 1.57
CLDND1-202ENST00000394180 PNKPQ96T60 521 aa24.83■■□□□ 1.57
CLDND1-202ENST00000394180 POLR3EQ9NVU0 708 aa24.83■■□□□ 1.57
CLDND1-202ENST00000394180 DBF4Q9UBU7 674 aaPredicted RBP24.83■■□□□ 1.57
CLDND1-202ENST00000394180 RFX7Q2KHR2 1363 aa24.83■■□□□ 1.56
CLDND1-202ENST00000394180 EBAG9O00559 213 aa24.82■■□□□ 1.56
CLDND1-202ENST00000394180 CCDC175P0C221 793 aa24.82■■□□□ 1.56
CLDND1-202ENST00000394180 PDIA6Q15084 440 aa24.82■■□□□ 1.56
CLDND1-202ENST00000394180 KIF3CO14782 793 aa24.82■■□□□ 1.56
CLDND1-202ENST00000394180 MYL6BP14649 208 aa24.82■■□□□ 1.56
CLDND1-202ENST00000394180 NDUFA8P51970 172 aa24.82■■□□□ 1.56
CLDND1-202ENST00000394180 CEBPZQ03701 1054 aaKnown RBP24.82■■□□□ 1.56
CLDND1-202ENST00000394180 MAP9Q49MG5 647 aa24.82■■□□□ 1.56
CLDND1-202ENST00000394180 SALL1Q9NSC2 1324 aa24.81■■□□□ 1.56
CLDND1-202ENST00000394180 TMCO5BA8MYB1 307 aa24.81■■□□□ 1.56
CLDND1-202ENST00000394180 KIF4BQ2VIQ3 1234 aa24.81■■□□□ 1.56
CLDND1-202ENST00000394180 PRPF38AQ8NAV1 312 aaKnown RBP24.81■■□□□ 1.56
CLDND1-202ENST00000394180 LINC00301Q8NCQ3 95 aa24.81■■□□□ 1.56
CLDND1-202ENST00000394180 SLC4A9Q96Q91 983 aa24.81■■□□□ 1.56
CLDND1-202ENST00000394180 A0A087WWV3 80 aa24.81■■□□□ 1.56
CLDND1-202ENST00000394180 RNF40O75150 1001 aa24.8■■□□□ 1.56
CLDND1-202ENST00000394180 RBM28Q9NW13 759 aaKnown RBP24.8■■□□□ 1.56
CLDND1-202ENST00000394180 RGS17Q9UGC6 210 aaPredicted RBP24.8■■□□□ 1.56
CLDND1-202ENST00000394180 CCDC189A1A4V9 331 aa24.8■■□□□ 1.56
CLDND1-202ENST00000394180 PPP1R12AO14974 1030 aaPredicted RBP24.8■■□□□ 1.56
CLDND1-202ENST00000394180 KIF5CO60282 957 aa24.8■■□□□ 1.56
CLDND1-202ENST00000394180 CMA1P23946 247 aa24.8■■□□□ 1.56
CLDND1-202ENST00000394180 SCRN1Q12765 414 aa24.8■■□□□ 1.56
CLDND1-202ENST00000394180 GBP6Q6ZN66 633 aa24.8■■□□□ 1.56
CLDND1-202ENST00000394180 ELOA2Q8IYF1 753 aaPredicted RBP24.8■■□□□ 1.56
CLDND1-202ENST00000394180 KAT2BQ92831 832 aa24.8■■□□□ 1.56
CLDND1-202ENST00000394180 MYO1AQ9UBC5 1043 aa24.8■■□□□ 1.56
CLDND1-202ENST00000394180 TC2NQ8N9U0 490 aa24.79■■□□□ 1.56
CLDND1-202ENST00000394180 FAM227BQ96M60 508 aa24.79■■□□□ 1.56
CLDND1-202ENST00000394180 PANX2Q96RD6 677 aa24.79■■□□□ 1.56
CLDND1-202ENST00000394180 RAI14Q9P0K7 980 aa24.79■■□□□ 1.56
CLDND1-202ENST00000394180 ZNF202O95125 648 aa24.78■■□□□ 1.56
CLDND1-202ENST00000394180 ATP1A3P13637 1013 aa24.78■■□□□ 1.56
CLDND1-202ENST00000394180 HSP90AB3PQ58FF7 597 aa24.78■■□□□ 1.56
CLDND1-202ENST00000394180 FAM177A1Q8N128 213 aaPredicted RBP24.78■■□□□ 1.56
CLDND1-202ENST00000394180 U3KPZ7 1027 aaPredicted RBP24.78■■□□□ 1.56
CLDND1-202ENST00000394180 KCNV1Q6PIU1 500 aa24.78■■□□□ 1.56
CLDND1-202ENST00000394180 Q6ZUG5 572 aa24.78■■□□□ 1.56
CLDND1-202ENST00000394180 DNAJC10Q8IXB1 793 aa24.78■■□□□ 1.56
CLDND1-202ENST00000394180 AGXT2Q9BYV1 514 aa24.78■■□□□ 1.56
CLDND1-202ENST00000394180 DDX21Q9NR30 783 aaKnown RBP eCLIP24.78■■□□□ 1.56
CLDND1-202ENST00000394180 GNL3LQ9NVN8 582 aaKnown RBP24.78■■□□□ 1.56
CLDND1-202ENST00000394180 FAM169AQ9Y6X4 670 aa24.78■■□□□ 1.56
CLDND1-202ENST00000394180 A0A1B0GVL5 298 aa24.77■■□□□ 1.56
CLDND1-202ENST00000394180 CTAGE15A4D2H0 777 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms