RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 DTNBO60941 627 aa22.13■■□□□ 1.13
CCDC50-202ENST00000392456 LCORLQ8N3X6 602 aa22.13■■□□□ 1.13
CCDC50-202ENST00000392456 TMX1Q9H3N1 280 aa22.13■■□□□ 1.13
CCDC50-202ENST00000392456 C6orf229H3BNL8 230 aa22.12■■□□□ 1.13
CCDC50-202ENST00000392456 CYP7A1P22680 504 aa22.12■■□□□ 1.13
CCDC50-202ENST00000392456 ATP2B4P23634 1241 aa22.12■■□□□ 1.13
CCDC50-202ENST00000392456 SEMA3EO15041 775 aa22.12■■□□□ 1.13
CCDC50-202ENST00000392456 GRIK5Q16478 980 aa22.12■■□□□ 1.13
CCDC50-202ENST00000392456 MCTP1Q6DN14 999 aa22.12■■□□□ 1.13
CCDC50-202ENST00000392456 TDRD7Q8NHU6 1098 aaKnown RBP22.12■■□□□ 1.13
CCDC50-202ENST00000392456 LARGE1O95461 756 aa22.11■■□□□ 1.13
CCDC50-202ENST00000392456 ZNF219Q9P2Y4 722 aaPredicted RBP22.11■■□□□ 1.13
CCDC50-202ENST00000392456 ALDH1B1P30837 517 aa22.11■■□□□ 1.13
CCDC50-202ENST00000392456 SATB1Q01826 763 aa22.11■■□□□ 1.13
CCDC50-202ENST00000392456 BLOC1S2Q6QNY1 142 aa22.11■■□□□ 1.13
CCDC50-202ENST00000392456 RBM27Q9P2N5 1060 aaKnown RBP22.11■■□□□ 1.13
CCDC50-202ENST00000392456 RPS6KB1P23443 525 aa22.1■■□□□ 1.13
CCDC50-202ENST00000392456 C15orf52Q6ZUT6 534 aaKnown RBP22.1■■□□□ 1.13
CCDC50-202ENST00000392456 NEK1Q96PY6 1258 aa22.1■■□□□ 1.13
CCDC50-202ENST00000392456 EPB41L4AQ9HCS5 686 aaPredicted RBP22.1■■□□□ 1.13
CCDC50-202ENST00000392456 CD209Q9NNX6 404 aa22.1■■□□□ 1.13
CCDC50-202ENST00000392456 E7EWF7 191 aa22.09■■□□□ 1.13
CCDC50-202ENST00000392456 RIMBP2O15034 1052 aa22.09■■□□□ 1.13
CCDC50-202ENST00000392456 PSMA5P28066 241 aa22.09■■□□□ 1.13
CCDC50-202ENST00000392456 MCM2P49736 904 aa22.09■■□□□ 1.13
CCDC50-202ENST00000392456 MECOMQ03112 1051 aa22.09■■□□□ 1.13
CCDC50-202ENST00000392456 NSUN4Q96CB9 384 aaKnown RBP22.09■■□□□ 1.13
CCDC50-202ENST00000392456 LRRC2Q9BYS8 371 aa22.09■■□□□ 1.13
CCDC50-202ENST00000392456 H0YIN7 160 aa22.09■■□□□ 1.13
CCDC50-202ENST00000392456 NKX2-3Q8TAU0 364 aa22.09■■□□□ 1.13
CCDC50-202ENST00000392456 CACNA1SQ13698 1873 aa22.09■■□□□ 1.13
CCDC50-202ENST00000392456 DYNLL1P63167 89 aaKnown RBP22.08■■□□□ 1.13
CCDC50-202ENST00000392456 NBPF3Q9H094 633 aa22.08■■□□□ 1.13
CCDC50-202ENST00000392456 ZNF804AQ7Z570 1209 aa22.08■■□□□ 1.13
CCDC50-202ENST00000392456 TTC12Q9H892 705 aaPredicted RBP22.08■■□□□ 1.13
CCDC50-202ENST00000392456 QSER1Q2KHR3 1735 aa22.08■■□□□ 1.12
CCDC50-202ENST00000392456 GSG1L2A8MUP6 293 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 CUL4AQ13619 759 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 TOB2Q14106 344 aaPredicted RBP22.07■■□□□ 1.12
CCDC50-202ENST00000392456 NBPF20Q3BBV1 942 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 CHST3Q7LGC8 479 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 GPT2Q8TD30 523 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 LRRC37AA6NMS7 1700 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 PKP1Q13835 747 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 KRT32Q14532 448 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 LTBP1Q14766 1721 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 TMC4Q7Z404 712 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 MPNDQ8N594 471 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 RNF214Q8ND24 703 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 LIMCH1Q9UPQ0 1083 aa22.07■■□□□ 1.12
CCDC50-202ENST00000392456 PDS5AQ29RF7 1337 aaKnown RBP22.06■■□□□ 1.12
CCDC50-202ENST00000392456 SYCE3A1L190 88 aa22.06■■□□□ 1.12
CCDC50-202ENST00000392456 ZBTB7AO95365 584 aa22.06■■□□□ 1.12
CCDC50-202ENST00000392456 NAA16Q6N069 864 aaPredicted RBP22.06■■□□□ 1.12
CCDC50-202ENST00000392456 RIOK1Q9BRS2 568 aaKnown RBP22.06■■□□□ 1.12
CCDC50-202ENST00000392456 TPCN1Q9ULQ1 816 aa22.06■■□□□ 1.12
CCDC50-202ENST00000392456 IFNL3Q8IZI9 196 aa22.06■■□□□ 1.12
CCDC50-202ENST00000392456 SDR42E1Q8WUS8 393 aa22.06■■□□□ 1.12
CCDC50-202ENST00000392456 INCENPQ9NQS7 918 aa22.06■■□□□ 1.12
CCDC50-202ENST00000392456 TMEM63CQ9P1W3 806 aa22.06■■□□□ 1.12
CCDC50-202ENST00000392456 IMMTQ16891 758 aaKnown RBP22.05■■□□□ 1.12
CCDC50-202ENST00000392456 SLC4A4Q9Y6R1 1079 aa22.05■■□□□ 1.12
CCDC50-202ENST00000392456 DUOX1Q9NRD9 1551 aa22.05■■□□□ 1.12
CCDC50-202ENST00000392456 MYH13Q9UKX3 1938 aa22.05■■□□□ 1.12
CCDC50-202ENST00000392456 SMIM22K7EJ46 135 aa22.05■■□□□ 1.12
CCDC50-202ENST00000392456 IL1R1P14778 569 aa22.05■■□□□ 1.12
CCDC50-202ENST00000392456 CASQ1P31415 396 aa22.05■■□□□ 1.12
CCDC50-202ENST00000392456 ME3Q16798 604 aa22.05■■□□□ 1.12
CCDC50-202ENST00000392456 DPP8Q6V1X1 898 aaPredicted RBP22.05■■□□□ 1.12
CCDC50-202ENST00000392456 CCDC125Q86Z20 511 aa22.05■■□□□ 1.12
CCDC50-202ENST00000392456 SLX4Q8IY92 1834 aa22.05■■□□□ 1.12
CCDC50-202ENST00000392456 ST3GAL1Q11201 340 aa22.04■■□□□ 1.12
CCDC50-202ENST00000392456 MAGEB6P1A0A0J9YX57 407 aa22.04■■□□□ 1.12
CCDC50-202ENST00000392456 ZNF213O14771 459 aa22.04■■□□□ 1.12
CCDC50-202ENST00000392456 STYK1Q6J9G0 422 aa22.04■■□□□ 1.12
CCDC50-202ENST00000392456 TBC1D10CQ8IV04 446 aa22.04■■□□□ 1.12
CCDC50-202ENST00000392456 NECAB1Q8N987 351 aa22.04■■□□□ 1.12
CCDC50-202ENST00000392456 TACC3Q9Y6A5 838 aa22.04■■□□□ 1.12
CCDC50-202ENST00000392456 GYS2P54840 703 aa22.03■■□□□ 1.12
CCDC50-202ENST00000392456 NUCB2P80303 420 aa22.03■■□□□ 1.12
CCDC50-202ENST00000392456 DIXDC1Q155Q3 683 aa22.03■■□□□ 1.12
CCDC50-202ENST00000392456 DOK7Q18PE1 504 aa22.03■■□□□ 1.12
CCDC50-202ENST00000392456 MUM1L1Q5H9M0 696 aa22.03■■□□□ 1.12
CCDC50-202ENST00000392456 Q6ZUG5 572 aa22.03■■□□□ 1.12
CCDC50-202ENST00000392456 ZNF446Q9NWS9 450 aa22.03■■□□□ 1.12
CCDC50-202ENST00000392456 ATF5Q9Y2D1 282 aaPredicted RBP22.03■■□□□ 1.12
CCDC50-202ENST00000392456 EXOSC10Q01780 885 aaKnown RBP22.02■■□□□ 1.12
CCDC50-202ENST00000392456 WDR66Q8TBY9 1149 aa22.02■■□□□ 1.12
CCDC50-202ENST00000392456 C7orf43Q8WVR3 580 aa22.02■■□□□ 1.12
CCDC50-202ENST00000392456 GPHNQ9NQX3 736 aaPredicted RBP22.02■■□□□ 1.12
CCDC50-202ENST00000392456 AATFQ9NY61 560 aaKnown RBP eCLIP22.02■■□□□ 1.12
CCDC50-202ENST00000392456 DONSONQ9NYP3 566 aa22.02■■□□□ 1.12
CCDC50-202ENST00000392456 CHD4Q14839 1912 aa22.02■■□□□ 1.12
CCDC50-202ENST00000392456 DHX32Q7L7V1 743 aaKnown RBP22.02■■□□□ 1.12
CCDC50-202ENST00000392456 IRF6O14896 467 aa22.01■■□□□ 1.11
CCDC50-202ENST00000392456 KIAA1524Q8TCG1 905 aa22.01■■□□□ 1.11
CCDC50-202ENST00000392456 SALL1Q9NSC2 1324 aa22.01■■□□□ 1.11
CCDC50-202ENST00000392456 LAMA4Q16363 1823 aa22.01■■□□□ 1.11
CCDC50-202ENST00000392456 LDHBP07195 334 aaKnown RBP22.01■■□□□ 1.11
CCDC50-202ENST00000392456 CTDSPL2Q05D32 466 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms