RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 LMTK3Q96Q04 1460 aa20.69■□□□□ 0.9
ERCC2-201ENST00000391941 POLR2DO15514 142 aaKnown RBP20.69■□□□□ 0.9
ERCC2-201ENST00000391941 KCNJ6P48051 423 aa20.69■□□□□ 0.9
ERCC2-201ENST00000391941 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.69■□□□□ 0.9
ERCC2-201ENST00000391941 HPSEQ9Y251 543 aa20.69■□□□□ 0.9
ERCC2-201ENST00000391941 NR5A1Q13285 461 aa20.69■□□□□ 0.9
ERCC2-201ENST00000391941 OLFM4Q6UX06 510 aa20.69■□□□□ 0.9
ERCC2-201ENST00000391941 TEX33O43247 280 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 CASQ1P31415 396 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 STAMQ92783 540 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 TOMM22Q9NS69 142 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 SERTAD1Q9UHV2 236 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 ARFGEF2Q9Y6D5 1785 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 SCN11AQ9UI33 1791 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 SMIM22K7EJ46 135 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 IKBKBO14920 756 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 PPP2R3AQ06190 1150 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 APOA5Q6Q788 366 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 CREBRFQ8IUR6 639 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 TC2NQ8N9U0 490 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 PARD6BQ9BYG5 372 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 TACC3Q9Y6A5 838 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 FER1L4A9Z1Z3 1794 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 PHLPP2Q6ZVD8 1323 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 CCDC66A2RUB6 948 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 FAM205CA6NFA0 338 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 KRBA2Q6ZNG9 492 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 PIH1D3Q9NQM4 214 aaKnown RBP20.68■□□□□ 0.9
ERCC2-201ENST00000391941 MAN1B1Q9UKM7 699 aa20.68■□□□□ 0.9
ERCC2-201ENST00000391941 ANGEL1Q9UNK9 670 aaKnown RBP20.68■□□□□ 0.9
ERCC2-201ENST00000391941 APPBP2Q92624 585 aa20.67■□□□□ 0.9
ERCC2-201ENST00000391941 TEX13AQ9BXU3 409 aaPredicted RBP20.67■□□□□ 0.9
ERCC2-201ENST00000391941 UBN2Q6ZU65 1347 aa20.67■□□□□ 0.9
ERCC2-201ENST00000391941 LRRFIP1Q32MZ4 808 aaKnown RBP20.67■□□□□ 0.9
ERCC2-201ENST00000391941 CC2D1AQ6P1N0 951 aaPredicted RBP20.67■□□□□ 0.9
ERCC2-201ENST00000391941 CCDC12Q8WUD4 166 aaPredicted RBP20.67■□□□□ 0.9
ERCC2-201ENST00000391941 WWC3Q9ULE0 1092 aa20.67■□□□□ 0.9
ERCC2-201ENST00000391941 TRDNQ13061 729 aa20.66■□□□□ 0.9
ERCC2-201ENST00000391941 RESP18Q5W5W9 173 aa20.66■□□□□ 0.9
ERCC2-201ENST00000391941 CCDC102BQ68D86 513 aa20.66■□□□□ 0.9
ERCC2-201ENST00000391941 FAM217BQ9NTX9 383 aaPredicted RBP20.66■□□□□ 0.9
ERCC2-201ENST00000391941 TOB1P50616 345 aaPredicted RBP20.66■□□□□ 0.9
ERCC2-201ENST00000391941 TAF3Q5VWG9 929 aa20.66■□□□□ 0.9
ERCC2-201ENST00000391941 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.66■□□□□ 0.9
ERCC2-201ENST00000391941 GOLGA8AA7E2F4 631 aa20.65■□□□□ 0.9
ERCC2-201ENST00000391941 IARSP41252 1262 aaKnown RBP20.65■□□□□ 0.9
ERCC2-201ENST00000391941 AFMP43652 599 aa20.65■□□□□ 0.9
ERCC2-201ENST00000391941 SMC1AQ14683 1233 aaKnown RBP20.65■□□□□ 0.9
ERCC2-201ENST00000391941 OXER1Q8TDS5 423 aa20.65■□□□□ 0.9
ERCC2-201ENST00000391941 ARGLU1Q9NWB6 273 aaPredicted RBP20.65■□□□□ 0.9
ERCC2-201ENST00000391941 PCDHB6Q9Y5E3 794 aa20.65■□□□□ 0.9
ERCC2-201ENST00000391941 H3BQF6 201 aa20.65■□□□□ 0.9
ERCC2-201ENST00000391941 TICAM2Q86XR7 235 aa20.65■□□□□ 0.9
ERCC2-201ENST00000391941 MCM6Q14566 821 aa20.64■□□□□ 0.9
ERCC2-201ENST00000391941 METTL24Q5JXM2 366 aa20.64■□□□□ 0.9
ERCC2-201ENST00000391941 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.64■□□□□ 0.9
ERCC2-201ENST00000391941 ZMYM6O95789 1325 aa20.64■□□□□ 0.89
ERCC2-201ENST00000391941 SH2B2O14492 632 aaPredicted RBP20.64■□□□□ 0.89
ERCC2-201ENST00000391941 TMEM67Q5HYA8 995 aa20.64■□□□□ 0.89
ERCC2-201ENST00000391941 C19orf44Q9H6X5 657 aa20.64■□□□□ 0.89
ERCC2-201ENST00000391941 RNF216Q9NWF9 866 aaPredicted RBP20.64■□□□□ 0.89
ERCC2-201ENST00000391941 EFCAB8A8MWE9 144 aa20.64■□□□□ 0.89
ERCC2-201ENST00000391941 ZBTB43O43298 467 aa20.64■□□□□ 0.89
ERCC2-201ENST00000391941 N4BP1O75113 896 aaKnown RBP20.64■□□□□ 0.89
ERCC2-201ENST00000391941 KIFC2Q96AC6 838 aa20.64■□□□□ 0.89
ERCC2-201ENST00000391941 LCMT1Q9UIC8 334 aa20.64■□□□□ 0.89
ERCC2-201ENST00000391941 ZNF532Q9HCE3 1301 aa20.63■□□□□ 0.89
ERCC2-201ENST00000391941 PRKAB2O43741 272 aa20.63■□□□□ 0.89
ERCC2-201ENST00000391941 DHX8Q14562 1220 aaKnown RBP20.63■□□□□ 0.89
ERCC2-201ENST00000391941 CIAO1O76071 339 aa20.63■□□□□ 0.89
ERCC2-201ENST00000391941 TUBB4AP04350 444 aa20.63■□□□□ 0.89
ERCC2-201ENST00000391941 NTRK3Q16288 839 aa20.63■□□□□ 0.89
ERCC2-201ENST00000391941 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.63■□□□□ 0.89
ERCC2-201ENST00000391941 MRFAP1Q9Y605 127 aa20.63■□□□□ 0.89
ERCC2-201ENST00000391941 ARHGAP6O43182 974 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 CBFA2T2O43439 604 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 CDC25AP30304 524 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 PHKA1P46020 1223 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 MAP3K9P80192 1104 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 POSTNQ15063 836 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 GREM2Q9H772 168 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 CCP110O43303 1012 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 RAD51AP2Q09MP3 1159 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 TRIM29Q14134 588 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 RAD9BQ6WBX8 426 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 NUP133Q8WUM0 1156 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 ZSWIM5Q9P217 1185 aa20.62■□□□□ 0.89
ERCC2-201ENST00000391941 ZSCAN12O43309 604 aa20.61■□□□□ 0.89
ERCC2-201ENST00000391941 PHACTR2O75167 634 aa20.61■□□□□ 0.89
ERCC2-201ENST00000391941 ZFYP08048 801 aaPredicted RBP20.61■□□□□ 0.89
ERCC2-201ENST00000391941 MDM2Q00987 491 aaPredicted RBP20.61■□□□□ 0.89
ERCC2-201ENST00000391941 DIS3L2Q8IYB7 885 aaKnown RBP20.61■□□□□ 0.89
ERCC2-201ENST00000391941 RHOXF2BP0C7M4 288 aa20.61■□□□□ 0.89
ERCC2-201ENST00000391941 SKIDA1Q1XH10 827 aa20.61■□□□□ 0.89
ERCC2-201ENST00000391941 NOM1Q5C9Z4 860 aaKnown RBP20.61■□□□□ 0.89
ERCC2-201ENST00000391941 SPECC1LQ69YQ0 1117 aa20.61■□□□□ 0.89
ERCC2-201ENST00000391941 LDHAL6AQ6ZMR3 332 aa20.61■□□□□ 0.89
ERCC2-201ENST00000391941 PROSER2Q86WR7 435 aaPredicted RBP20.61■□□□□ 0.89
ERCC2-201ENST00000391941 CCDC191Q8NCU4 936 aa20.61■□□□□ 0.89
ERCC2-201ENST00000391941 RHOXF2Q9BQY4 288 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms