RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 ATP10DQ9P241 1426 aa20.24■□□□□ 0.83
UBL3-201ENST00000380680 DTHD1Q6ZMT9 781 aa20.24■□□□□ 0.83
UBL3-201ENST00000380680 ASIC1P78348 528 aa20.24■□□□□ 0.83
UBL3-201ENST00000380680 ADALQ6DHV7 355 aa20.24■□□□□ 0.83
UBL3-201ENST00000380680 FBXO18Q8NFZ0 1043 aa20.24■□□□□ 0.83
UBL3-201ENST00000380680 RRP36Q96EU6 259 aaKnown RBP20.24■□□□□ 0.83
UBL3-201ENST00000380680 SEPT11Q9NVA2 429 aaKnown RBP20.24■□□□□ 0.83
UBL3-201ENST00000380680 USP21Q9UK80 565 aa20.24■□□□□ 0.83
UBL3-201ENST00000380680 TDRD12Q587J7 1177 aaKnown RBP20.23■□□□□ 0.83
UBL3-201ENST00000380680 NSUN7Q8NE18 718 aaKnown RBP20.23■□□□□ 0.83
UBL3-201ENST00000380680 FEZ1Q99689 392 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 ZSWIM4Q9H7M6 989 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 NBPF26B4DH59 902 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 PSMA7O14818 248 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 CUTAO60888 179 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 SPAG1Q07617 926 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 FAM47AQ5JRC9 791 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 NBPF14Q5TI25 921 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 NBPF10Q6P3W6 841 aaKnown RBP20.23■□□□□ 0.83
UBL3-201ENST00000380680 PIK3AP1Q6ZUJ8 805 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 NBPF15Q8N660 670 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 VPS54Q9P1Q0 977 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 ZNF75DP51815 510 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 ODF2Q5BJF6 829 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 GOLGA6L9A6NEM1 432 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 TNNI2P48788 182 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 CCDC40Q4G0X9 1142 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 CTAGE1Q96RT6 745 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 WWC3Q9ULE0 1092 aa20.23■□□□□ 0.83
UBL3-201ENST00000380680 AXDND1Q5T1B0 1012 aaPredicted RBP20.22■□□□□ 0.83
UBL3-201ENST00000380680 TRIM21P19474 475 aaKnown RBP20.22■□□□□ 0.83
UBL3-201ENST00000380680 GNA11P29992 359 aa20.22■□□□□ 0.83
UBL3-201ENST00000380680 GGA1Q9UJY5 639 aa20.22■□□□□ 0.83
UBL3-201ENST00000380680 USPL1Q5W0Q7 1092 aa20.22■□□□□ 0.83
UBL3-201ENST00000380680 KIF20AO95235 890 aa20.21■□□□□ 0.83
UBL3-201ENST00000380680 MAP2P11137 1827 aaKnown RBP20.21■□□□□ 0.83
UBL3-201ENST00000380680 PPP1R12BO60237 982 aaPredicted RBP20.21■□□□□ 0.83
UBL3-201ENST00000380680 TFAP4Q01664 338 aa20.21■□□□□ 0.83
UBL3-201ENST00000380680 TMEM132AQ24JP5 1023 aa20.21■□□□□ 0.83
UBL3-201ENST00000380680 RBM17Q96I25 401 aaKnown RBP20.21■□□□□ 0.83
UBL3-201ENST00000380680 C1orf167Q5SNV9 1468 aa20.21■□□□□ 0.83
UBL3-201ENST00000380680 SNAP23O00161 211 aa20.2■□□□□ 0.82
UBL3-201ENST00000380680 SKIDA1Q1XH10 827 aa20.2■□□□□ 0.82
UBL3-201ENST00000380680 LETM2Q2VYF4 491 aa20.2■□□□□ 0.82
UBL3-201ENST00000380680 MAPKAPK5Q8IW41 473 aa20.2■□□□□ 0.82
UBL3-201ENST00000380680 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.2■□□□□ 0.82
UBL3-201ENST00000380680 V9GYY5 206 aaPredicted RBP20.2■□□□□ 0.82
UBL3-201ENST00000380680 ADD2P35612 726 aa20.2■□□□□ 0.82
UBL3-201ENST00000380680 PPP2R5BQ15173 497 aa20.2■□□□□ 0.82
UBL3-201ENST00000380680 PCDHA7Q9UN72 937 aa20.2■□□□□ 0.82
UBL3-201ENST00000380680 TCERG1LQ5VWI1 586 aa20.2■□□□□ 0.82
UBL3-201ENST00000380680 FANCBQ8NB91 859 aa20.2■□□□□ 0.82
UBL3-201ENST00000380680 BTBD18B2RXH4 712 aa20.2■□□□□ 0.82
UBL3-201ENST00000380680 PARP1P09874 1014 aaKnown RBP20.2■□□□□ 0.82
UBL3-201ENST00000380680 EIF6P56537 245 aaKnown RBP20.2■□□□□ 0.82
UBL3-201ENST00000380680 FAM182BQ5T319 152 aa20.2■□□□□ 0.82
UBL3-201ENST00000380680 GPHNQ9NQX3 736 aaPredicted RBP20.2■□□□□ 0.82
UBL3-201ENST00000380680 COL3A1P02461 1466 aaPredicted RBP20.2■□□□□ 0.82
UBL3-201ENST00000380680 SPATA31D1Q6ZQQ2 1576 aa20.19■□□□□ 0.82
UBL3-201ENST00000380680 TNKSO95271 1327 aa20.19■□□□□ 0.82
UBL3-201ENST00000380680 DNA2P51530 1060 aa20.19■□□□□ 0.82
UBL3-201ENST00000380680 FAM114A1Q8IWE2 563 aa20.19■□□□□ 0.82
UBL3-201ENST00000380680 FTOQ9C0B1 505 aaKnown RBP eCLIP20.19■□□□□ 0.82
UBL3-201ENST00000380680 ZDHHC9Q9Y397 364 aa20.19■□□□□ 0.82
UBL3-201ENST00000380680 PPP4R3BQ5MIZ7 849 aa20.19■□□□□ 0.82
UBL3-201ENST00000380680 APOA5Q6Q788 366 aa20.19■□□□□ 0.82
UBL3-201ENST00000380680 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.19■□□□□ 0.82
UBL3-201ENST00000380680 CGNQ9P2M7 1197 aaKnown RBP20.19■□□□□ 0.82
UBL3-201ENST00000380680 DIP2BQ9P265 1576 aa20.19■□□□□ 0.82
UBL3-201ENST00000380680 ERVV-1B6SEH8 477 aa20.18■□□□□ 0.82
UBL3-201ENST00000380680 TNIP1Q15025 636 aa20.18■□□□□ 0.82
UBL3-201ENST00000380680 TTC38Q5R3I4 469 aa20.18■□□□□ 0.82
UBL3-201ENST00000380680 TGFBRAP1Q8WUH2 860 aa20.18■□□□□ 0.82
UBL3-201ENST00000380680 KIAA1468Q9P260 1216 aa20.18■□□□□ 0.82
UBL3-201ENST00000380680 ARHGEF28Q8N1W1 1705 aaKnown RBP20.18■□□□□ 0.82
UBL3-201ENST00000380680 ZMYM6O95789 1325 aa20.18■□□□□ 0.82
UBL3-201ENST00000380680 PFKFB1P16118 471 aa20.18■□□□□ 0.82
UBL3-201ENST00000380680 PARP3Q9Y6F1 533 aa20.18■□□□□ 0.82
UBL3-201ENST00000380680 DIP2AQ14689 1571 aa20.18■□□□□ 0.82
UBL3-201ENST00000380680 TNS3Q68CZ2 1445 aa20.18■□□□□ 0.82
UBL3-201ENST00000380680 USO1O60763 962 aaKnown RBP20.18■□□□□ 0.82
UBL3-201ENST00000380680 EIF3JO75822 258 aaKnown RBP20.18■□□□□ 0.82
UBL3-201ENST00000380680 FANCCQ00597 558 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 UBE4AQ14139 1066 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 SUSD4Q5VX71 490 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 STAMQ92783 540 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 TTC14Q96N46 770 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.17■□□□□ 0.82
UBL3-201ENST00000380680 NOSTRINQ8IVI9 506 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 CLIC4Q9Y696 253 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 PRKAB2O43741 272 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 KRT79Q5XKE5 535 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 IQCEQ6IPM2 695 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 OGFOD1Q8N543 542 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 CCDC102AQ96A19 550 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 MAPK8IP1Q9UQF2 711 aa20.17■□□□□ 0.82
UBL3-201ENST00000380680 NLRP12P59046 1061 aa20.16■□□□□ 0.82
UBL3-201ENST00000380680 SPDYE4A6NLX3 237 aa20.16■□□□□ 0.82
UBL3-201ENST00000380680 FAM193AP78312 1265 aa20.16■□□□□ 0.82
UBL3-201ENST00000380680 CEMIPQ8WUJ3 1361 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms