RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 EXOC5O00471 708 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 SSR1P43307 286 aaKnown RBP9.52□□□□□ -0.89
VPS36-201ENST00000378060 ZNF75DP51815 510 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 CCDC96Q2M329 555 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 CCDC152Q4G0S7 254 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 BCCIPQ9P287 314 aaKnown RBP eCLIP9.52□□□□□ -0.89
VPS36-201ENST00000378060 KCNQ2O43526 872 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 CAPN2P17655 700 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 GABPB1Q06547 395 aaPredicted RBP9.52□□□□□ -0.89
VPS36-201ENST00000378060 CWF19L2Q2TBE0 894 aaKnown RBP9.52□□□□□ -0.89
VPS36-201ENST00000378060 TCERG1LQ5VWI1 586 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 SEPT12Q8IYM1 358 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 BBXQ8WY36 941 aaPredicted RBP9.52□□□□□ -0.89
VPS36-201ENST00000378060 SPAG5Q96R06 1193 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 EHMT1Q9H9B1 1298 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 TMEM63CQ9P1W3 806 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 ANKIB1Q9P2G1 1089 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 PCDH11XQ9BZA7 1347 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 PCDH11YQ9BZA8 1340 aa9.52□□□□□ -0.89
VPS36-201ENST00000378060 SCN11AQ9UI33 1791 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 RTL9Q8NET4 1388 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 MPHOSPH10O00566 681 aaKnown RBP9.51□□□□□ -0.89
VPS36-201ENST00000378060 SLC27A2O14975 620 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 RNMTO43148 476 aaKnown RBP9.51□□□□□ -0.89
VPS36-201ENST00000378060 IQUBQ8NA54 791 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 PLVAPQ9BX97 442 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 SLC4A4Q9Y6R1 1079 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 DOT1LQ8TEK3 1739 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 RILPL1Q5EBL4 403 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 LEO1Q8WVC0 666 aaPredicted RBP9.51□□□□□ -0.89
VPS36-201ENST00000378060 BAG1Q99933 345 aaPredicted RBP9.51□□□□□ -0.89
VPS36-201ENST00000378060 SELENOOQ9BVL4 669 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 GOPCQ9HD26 462 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 PRAMEF22A3QJZ6 481 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 RIOK3O14730 519 aaKnown RBP9.51□□□□□ -0.89
VPS36-201ENST00000378060 LIG1P18858 919 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 CYP7A1P22680 504 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 MATR3P43243 847 aaKnown RBP eCLIP9.51□□□□□ -0.89
VPS36-201ENST00000378060 NAA16Q6N069 864 aaPredicted RBP9.51□□□□□ -0.89
VPS36-201ENST00000378060 ARFGAP2Q8N6H7 521 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 DHX58Q96C10 678 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 CCDC42Q96M95 316 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 TNS2Q63HR2 1409 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 THSD7AQ9UPZ6 1657 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 BICDL2A1A5D9 508 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 MYO1BO43795 1136 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 PPP1R2P41236 205 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 HSP90AA4PQ58FG1 418 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 CBX8Q9HC52 389 aa9.51□□□□□ -0.89
VPS36-201ENST00000378060 LUC7L2Q9Y383 392 aaKnown RBP9.51□□□□□ -0.89
VPS36-201ENST00000378060 CPA1P15085 419 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 TFCP2Q12800 502 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 TRAF1Q13077 416 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 DDX12PQ92771 950 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 UTP14AQ9BVJ6 771 aaKnown RBP9.5□□□□□ -0.89
VPS36-201ENST00000378060 A0A1B0GVL5 298 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 EBAG9O00559 213 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 GSTO1P78417 241 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 HDXQ7Z353 690 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 ERMNQ8TAM6 284 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 TMEM87BQ96K49 555 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 BICC1Q9H694 974 aaKnown RBP9.5□□□□□ -0.89
VPS36-201ENST00000378060 FSD2A1L4K1 749 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 AKR1B15C9JRZ8 316 aaPredicted RBP9.5□□□□□ -0.89
VPS36-201ENST00000378060 PRPHP41219 470 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 MNAT1P51948 309 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 EVCP57679 992 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 KIAA0753Q2KHM9 967 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 BARGINQ6ZT62 677 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 HOOK3Q86VS8 718 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 ITGB4P16144 1822 aa9.5□□□□□ -0.89
VPS36-201ENST00000378060 ZNF569Q5MCW4 686 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 ANO1Q5XXA6 986 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 CCDC155Q8N6L0 562 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 RSPH14Q9UHP6 348 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 UTRNP46939 3433 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 KCNQ4P56696 695 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 TRIM14Q14142 442 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 NBPF11Q86T75 865 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 KLHL34Q8N239 644 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 LMBR1Q8WVP7 490 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 DCAF5Q96JK2 942 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 STX8Q9UNK0 236 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 THRAP3Q9Y2W1 955 aaKnown RBP9.49□□□□□ -0.89
VPS36-201ENST00000378060 ASIC1P78348 528 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 MLKLQ8NB16 471 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 RNF216Q9NWF9 866 aaPredicted RBP9.49□□□□□ -0.89
VPS36-201ENST00000378060 CEMIPQ8WUJ3 1361 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 SIPA1L3O60292 1781 aaPredicted RBP9.49□□□□□ -0.89
VPS36-201ENST00000378060 KRT2P35908 639 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 VAV2P52735 878 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 PRPF4BQ13523 1007 aaKnown RBP9.49□□□□□ -0.89
VPS36-201ENST00000378060 CNKSR2Q8WXI2 1034 aa9.49□□□□□ -0.89
VPS36-201ENST00000378060 IBTKQ9P2D0 1353 aaPredicted RBP9.48□□□□□ -0.89
VPS36-201ENST00000378060 PNMA6EA0A0J9YXQ4 647 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 ARHGAP6O43182 974 aa9.48□□□□□ -0.89
VPS36-201ENST00000378060 GADD45BO75293 160 aaPredicted RBP9.48□□□□□ -0.89
VPS36-201ENST00000378060 MAPK8IP2Q13387 824 aaPredicted RBP9.48□□□□□ -0.89
VPS36-201ENST00000378060 ZNF772Q68DY9 489 aaPredicted RBP9.48□□□□□ -0.89
VPS36-201ENST00000378060 LZTFL1Q9NQ48 299 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms