RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 MAGEB6Q8N7X4 407 aa29.2■■■□□ 2.26
C9orf40-201ENST00000376854 PKNOX2Q96KN3 472 aa29.2■■■□□ 2.26
C9orf40-201ENST00000376854 CLIC6Q96NY7 704 aa29.2■■■□□ 2.26
C9orf40-201ENST00000376854 ZSWIM5Q9P217 1185 aa29.2■■■□□ 2.26
C9orf40-201ENST00000376854 SLC12A7Q9Y666 1083 aa29.2■■■□□ 2.26
C9orf40-201ENST00000376854 A0A0G2JS52 829 aa29.19■■■□□ 2.26
C9orf40-201ENST00000376854 FAM237AA0A1B0GTK4 181 aa29.19■■■□□ 2.26
C9orf40-201ENST00000376854 KIF2AO00139 706 aaPredicted RBP29.19■■■□□ 2.26
C9orf40-201ENST00000376854 IFIT3O14879 490 aaKnown RBP29.19■■■□□ 2.26
C9orf40-201ENST00000376854 MBD4O95243 580 aa29.19■■■□□ 2.26
C9orf40-201ENST00000376854 LIFRP42702 1097 aa29.19■■■□□ 2.26
C9orf40-201ENST00000376854 DHX8Q14562 1220 aaKnown RBP29.19■■■□□ 2.26
C9orf40-201ENST00000376854 E4F1Q66K89 784 aaPredicted RBP29.19■■■□□ 2.26
C9orf40-201ENST00000376854 SLC26A6Q9BXS9 759 aa29.19■■■□□ 2.26
C9orf40-201ENST00000376854 CGNQ9P2M7 1197 aaKnown RBP29.19■■■□□ 2.26
C9orf40-201ENST00000376854 MYH3P11055 1940 aa29.19■■■□□ 2.26
C9orf40-201ENST00000376854 IL6STP40189 918 aaPredicted RBP29.19■■■□□ 2.26
C9orf40-201ENST00000376854 MAP3K12Q12852 859 aa29.19■■■□□ 2.26
C9orf40-201ENST00000376854 PNOCQ13519 176 aa29.19■■■□□ 2.26
C9orf40-201ENST00000376854 MYO5AQ9Y4I1 1855 aaKnown RBP29.18■■■□□ 2.26
C9orf40-201ENST00000376854 COL16A1Q07092 1604 aaPredicted RBP29.18■■■□□ 2.26
C9orf40-201ENST00000376854 UBE2Q2LH0YL09 131 aa29.18■■■□□ 2.26
C9orf40-201ENST00000376854 SSRP1Q08945 709 aaKnown RBP29.18■■■□□ 2.26
C9orf40-201ENST00000376854 HSD3B7Q9H2F3 369 aa29.18■■■□□ 2.26
C9orf40-201ENST00000376854 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.18■■■□□ 2.26
C9orf40-201ENST00000376854 ERVV-1B6SEH8 477 aa29.17■■■□□ 2.26
C9orf40-201ENST00000376854 CUTAO60888 179 aa29.17■■■□□ 2.26
C9orf40-201ENST00000376854 ZNF34Q8IZ26 560 aa29.17■■■□□ 2.26
C9orf40-201ENST00000376854 FEZ1Q99689 392 aa29.17■■■□□ 2.26
C9orf40-201ENST00000376854 BCL11BQ9C0K0 894 aaPredicted RBP29.17■■■□□ 2.26
C9orf40-201ENST00000376854 ZNF215Q9UL58 517 aaPredicted RBP29.17■■■□□ 2.26
C9orf40-201ENST00000376854 ATP1A3P13637 1013 aa29.17■■■□□ 2.26
C9orf40-201ENST00000376854 SLC5A1P13866 664 aa29.17■■■□□ 2.26
C9orf40-201ENST00000376854 RASGRF1Q13972 1273 aa29.17■■■□□ 2.26
C9orf40-201ENST00000376854 ARMT1Q9H993 441 aa29.17■■■□□ 2.26
C9orf40-201ENST00000376854 STK36Q9NRP7 1315 aa29.17■■■□□ 2.26
C9orf40-201ENST00000376854 SNAP23O00161 211 aa29.16■■■□□ 2.26
C9orf40-201ENST00000376854 NRDCO43847 1150 aa29.16■■■□□ 2.26
C9orf40-201ENST00000376854 FMNL1O95466 1100 aaPredicted RBP29.16■■■□□ 2.26
C9orf40-201ENST00000376854 PPP1R13BQ96KQ4 1090 aa29.16■■■□□ 2.26
C9orf40-201ENST00000376854 CNNM2Q9H8M5 875 aa29.16■■■□□ 2.26
C9orf40-201ENST00000376854 TACC3Q9Y6A5 838 aa29.16■■■□□ 2.26
C9orf40-201ENST00000376854 ZSCAN20P17040 1043 aaPredicted RBP29.15■■■□□ 2.26
C9orf40-201ENST00000376854 MYL5Q02045 173 aa29.15■■■□□ 2.26
C9orf40-201ENST00000376854 KCNJ6P48051 423 aa29.15■■■□□ 2.26
C9orf40-201ENST00000376854 AKNAD1Q5T1N1 836 aa29.15■■■□□ 2.26
C9orf40-201ENST00000376854 KRT23Q9C075 422 aa29.15■■■□□ 2.26
C9orf40-201ENST00000376854 KCNH3Q9ULD8 1083 aa29.15■■■□□ 2.26
C9orf40-201ENST00000376854 DOT1LQ8TEK3 1739 aa29.14■■■□□ 2.26
C9orf40-201ENST00000376854 PSDA5PKW4 1024 aaPredicted RBP29.14■■■□□ 2.26
C9orf40-201ENST00000376854 LONRF3Q496Y0 759 aa29.14■■■□□ 2.26
C9orf40-201ENST00000376854 SUSD4Q5VX71 490 aa29.14■■■□□ 2.26
C9orf40-201ENST00000376854 METTL16Q86W50 562 aaKnown RBP29.14■■■□□ 2.26
C9orf40-201ENST00000376854 WASF1Q92558 559 aa29.14■■■□□ 2.26
C9orf40-201ENST00000376854 PLCH1Q4KWH8 1693 aa29.14■■■□□ 2.26
C9orf40-201ENST00000376854 KRBA2Q6ZNG9 492 aa29.14■■■□□ 2.25
C9orf40-201ENST00000376854 MFSD6Q6ZSS7 791 aa29.14■■■□□ 2.25
C9orf40-201ENST00000376854 NOSTRINQ8IVI9 506 aa29.14■■■□□ 2.25
C9orf40-201ENST00000376854 CNNM3Q8NE01 707 aa29.14■■■□□ 2.25
C9orf40-201ENST00000376854 ACSBG1Q96GR2 724 aa29.14■■■□□ 2.25
C9orf40-201ENST00000376854 PRDM4Q9UKN5 801 aa29.14■■■□□ 2.25
C9orf40-201ENST00000376854 GSG1L2A8MUP6 293 aa29.13■■■□□ 2.25
C9orf40-201ENST00000376854 IFNAR1P17181 557 aa29.13■■■□□ 2.25
C9orf40-201ENST00000376854 INTS5Q6P9B9 1019 aaKnown RBP29.13■■■□□ 2.25
C9orf40-201ENST00000376854 LRP5O75197 1615 aa29.13■■■□□ 2.25
C9orf40-201ENST00000376854 SERPINC1P01008 464 aa29.12■■■□□ 2.25
C9orf40-201ENST00000376854 UBASH3AP57075 661 aa29.12■■■□□ 2.25
C9orf40-201ENST00000376854 OLFM4Q6UX06 510 aa29.12■■■□□ 2.25
C9orf40-201ENST00000376854 KRI1Q8N9T8 703 aaKnown RBP29.12■■■□□ 2.25
C9orf40-201ENST00000376854 CBFA2T2O43439 604 aa29.12■■■□□ 2.25
C9orf40-201ENST00000376854 EIF5P55010 431 aaKnown RBP29.12■■■□□ 2.25
C9orf40-201ENST00000376854 ERO1AQ96HE7 468 aa29.12■■■□□ 2.25
C9orf40-201ENST00000376854 ROBO1Q9Y6N7 1651 aa29.12■■■□□ 2.25
C9orf40-201ENST00000376854 PRKAB2O43741 272 aa29.11■■■□□ 2.25
C9orf40-201ENST00000376854 GUCY1A2P33402 732 aa29.11■■■□□ 2.25
C9orf40-201ENST00000376854 RRP12Q5JTH9 1297 aaKnown RBP29.11■■■□□ 2.25
C9orf40-201ENST00000376854 AK7Q96M32 723 aa29.11■■■□□ 2.25
C9orf40-201ENST00000376854 MPHOSPH8Q99549 860 aa29.11■■■□□ 2.25
C9orf40-201ENST00000376854 ECM29Q5VYK3 1845 aa29.11■■■□□ 2.25
C9orf40-201ENST00000376854 BTBD18B2RXH4 712 aa29.11■■■□□ 2.25
C9orf40-201ENST00000376854 DMTNQ08495 405 aa29.11■■■□□ 2.25
C9orf40-201ENST00000376854 SAFBQ15424 915 aaKnown RBP eCLIP29.11■■■□□ 2.25
C9orf40-201ENST00000376854 DPF2Q92785 391 aa29.11■■■□□ 2.25
C9orf40-201ENST00000376854 SEC31BQ9NQW1 1179 aa29.11■■■□□ 2.25
C9orf40-201ENST00000376854 TOMM22Q9NS69 142 aa29.11■■■□□ 2.25
C9orf40-201ENST00000376854 OGFRQ9NZT2 677 aa29.11■■■□□ 2.25
C9orf40-201ENST00000376854 ADAMTS2O95450 1211 aa29.1■■■□□ 2.25
C9orf40-201ENST00000376854 MMP1P03956 469 aa29.1■■■□□ 2.25
C9orf40-201ENST00000376854 TDO2P48775 406 aa29.1■■■□□ 2.25
C9orf40-201ENST00000376854 FOXP4Q8IVH2 680 aaPredicted RBP29.1■■■□□ 2.25
C9orf40-201ENST00000376854 NOL12Q9UGY1 213 aaKnown RBP eCLIP29.1■■■□□ 2.25
C9orf40-201ENST00000376854 PCDHA5Q9Y5H7 936 aa29.1■■■□□ 2.25
C9orf40-201ENST00000376854 V9GYY5 206 aaPredicted RBP29.1■■■□□ 2.25
C9orf40-201ENST00000376854 SLU7O95391 586 aaKnown RBP29.1■■■□□ 2.25
C9orf40-201ENST00000376854 NACAP1Q9BZK3 213 aa29.1■■■□□ 2.25
C9orf40-201ENST00000376854 SART3Q15020 963 aaKnown RBP29.09■■■□□ 2.25
C9orf40-201ENST00000376854 RTN1Q16799 776 aa29.09■■■□□ 2.25
C9orf40-201ENST00000376854 CFAP100Q494V2 611 aa29.09■■■□□ 2.25
C9orf40-201ENST00000376854 DIS3L2Q8IYB7 885 aaKnown RBP29.09■■■□□ 2.25
C9orf40-201ENST00000376854 TRIM22Q8IYM9 498 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms