RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 ALDH8A1Q9H2A2 487 aaPredicted RBP7.47□□□□□ -1.21
CHD6-202ENST00000373222 TMOD3Q9NYL9 352 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 CEP126Q9P2H0 1117 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 MYH3P11055 1940 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 TAF1P21675 1872 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 RIC1Q4ADV7 1423 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 NUP98P52948 1817 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 ELP1O95163 1332 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 GRXCR2A6NFK2 248 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 FGAP02671 866 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 POLR3DP05423 398 aaPredicted RBP7.47□□□□□ -1.21
CHD6-202ENST00000373222 TCIRG1Q13488 830 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 KRT32Q14532 448 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 ARID5BQ14865 1188 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 NOLC1Q14978 699 aaKnown RBP eCLIP7.47□□□□□ -1.21
CHD6-202ENST00000373222 TTC39AQ5SRH9 613 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 NBPF3Q9H094 633 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 ATG3Q9NT62 314 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 BTG4Q9NY30 223 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 ZBTB1Q9Y2K1 713 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 TNS2Q63HR2 1409 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 PEX14O75381 377 aa7.46□□□□□ -1.21
CHD6-202ENST00000373222 ANTXR2P58335 489 aa7.46□□□□□ -1.21
CHD6-202ENST00000373222 UVSSAQ2YD98 709 aa7.46□□□□□ -1.21
CHD6-202ENST00000373222 CCDC144CPQ8IYA2 1237 aa7.46□□□□□ -1.21
CHD6-202ENST00000373222 STK11IPQ8N1F8 1099 aa7.46□□□□□ -1.21
CHD6-202ENST00000373222 KHSRPQ92945 711 aaKnown RBP eCLIP7.46□□□□□ -1.216e-7■■■□□ 17.9
CHD6-202ENST00000373222 SGSM3Q96HU1 749 aa7.46□□□□□ -1.21
CHD6-202ENST00000373222 PLCD4Q9BRC7 762 aa7.46□□□□□ -1.21
CHD6-202ENST00000373222 SCAND2PQ9GZW5 306 aaPredicted RBP7.46□□□□□ -1.21
CHD6-202ENST00000373222 HELLSQ9NRZ9 838 aa7.46□□□□□ -1.21
CHD6-202ENST00000373222 SLIT2O94813 1529 aa7.46□□□□□ -1.21
CHD6-202ENST00000373222 ABCC6O95255 1503 aa7.46□□□□□ -1.21
CHD6-202ENST00000373222 STRCQ7RTU9 1775 aa7.46□□□□□ -1.21
CHD6-202ENST00000373222 BAZ2BQ9UIF8 2168 aaKnown RBP7.46□□□□□ -1.21
CHD6-202ENST00000373222 SPEF2Q9C093 1822 aa7.46□□□□□ -1.22
CHD6-202ENST00000373222 SOS2Q07890 1332 aaPredicted RBP7.46□□□□□ -1.22
CHD6-202ENST00000373222 SALL1Q9NSC2 1324 aa7.46□□□□□ -1.22
CHD6-202ENST00000373222 WTIPA6NIX2 430 aaPredicted RBP7.46□□□□□ -1.22
CHD6-202ENST00000373222 LETM1O95202 739 aaPredicted RBP7.46□□□□□ -1.22
CHD6-202ENST00000373222 ITGA6P23229 1130 aa7.46□□□□□ -1.22
CHD6-202ENST00000373222 FAM200AQ8TCP9 573 aa7.46□□□□□ -1.22
CHD6-202ENST00000373222 PIBF1Q8WXW3 757 aa7.46□□□□□ -1.22
CHD6-202ENST00000373222 DSCC1Q9BVC3 393 aa7.46□□□□□ -1.22
CHD6-202ENST00000373222 CARD10Q9BWT7 1032 aa7.46□□□□□ -1.22
CHD6-202ENST00000373222 CLSTN2Q9H4D0 955 aa7.46□□□□□ -1.22
CHD6-202ENST00000373222 CARMIL3Q8ND23 1372 aa7.46□□□□□ -1.22
CHD6-202ENST00000373222 COL4A1P02462 1669 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 TPM2P07951 284 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 CLK2P49760 499 aaKnown RBP7.45□□□□□ -1.22
CHD6-202ENST00000373222 SETQ01105 290 aaPredicted RBP7.45□□□□□ -1.22
CHD6-202ENST00000373222 SNW1Q13573 536 aaKnown RBP7.45□□□□□ -1.22
CHD6-202ENST00000373222 CSPP1Q1MSJ5 1256 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 CCDC144BQ3MJ40 725 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 CCAR1Q8IX12 1150 aaKnown RBP7.45□□□□□ -1.22
CHD6-202ENST00000373222 MYL10Q9BUA6 226 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 AGXT2Q9BYV1 514 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 HPS5Q9UPZ3 1129 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 ECM29Q5VYK3 1845 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 KLF18A0A0U1RQI7 1052 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 A0A1B0GVL5 298 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 KIF28PB7ZC32 967 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 SMIM22K7EJ46 135 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 GPAA1O43292 621 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 PARNO95453 639 aaKnown RBP7.45□□□□□ -1.22
CHD6-202ENST00000373222 PHKA1P46020 1223 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 ZNF165P49910 485 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 MDM2Q00987 491 aaPredicted RBP7.45□□□□□ -1.22
CHD6-202ENST00000373222 IFIT5Q13325 482 aaKnown RBP7.45□□□□□ -1.22
CHD6-202ENST00000373222 METTL24Q5JXM2 366 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 LDHAL6AQ6ZMR3 332 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 SMIM5Q71RC9 77 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 CCDC186Q7Z3E2 898 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 TBC1D10CQ8IV04 446 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 TTLL11Q8NHH1 800 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 PIH1D3Q9NQM4 214 aaKnown RBP7.45□□□□□ -1.22
CHD6-202ENST00000373222 CLIC4Q9Y696 253 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 DDX60Q8IY21 1712 aaKnown RBP7.45□□□□□ -1.22
CHD6-202ENST00000373222 RFX7Q2KHR2 1363 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 UBN2Q6ZU65 1347 aa7.45□□□□□ -1.22
CHD6-202ENST00000373222 PRC1O43663 620 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 IDH1O75874 414 aaKnown RBP7.44□□□□□ -1.22
CHD6-202ENST00000373222 MCM5P33992 734 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 ATP2B3Q16720 1220 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 TMEM259Q4ZIN3 620 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 CCDC158Q5M9N0 1113 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 CYB5R4Q7L1T6 521 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 NLRP10Q86W26 655 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 PHOX2BQ99453 314 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 GPR108Q9NPR9 543 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 WWC3Q9ULE0 1092 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 TACC3Q9Y6A5 838 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 ANKRD33BA6NCL7 494 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 GOLGA8BA8MQT2 603 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 CIAO1O76071 339 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 ME1P48163 572 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 PPP1R15BQ5SWA1 713 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 SLC9C2Q5TAH2 1124 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 ISM2Q6H9L7 571 aa7.44□□□□□ -1.22
CHD6-202ENST00000373222 RBM43Q6ZSC3 357 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms