RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 AOPEPQ8N6M6 819 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 NDUFB9Q9Y6M9 179 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 CCNT1O60563 726 aaKnown RBP11.03□□□□□ -0.64
COL4A6-202ENST00000372216 ZBED4O75132 1171 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 CPA1P15085 419 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 ZAP70P43403 619 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 DACT1Q9NYF0 836 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 ABL1P00519 1130 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 CCDC175P0C221 793 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 GEN1Q17RS7 908 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 TMEM87BQ96K49 555 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 C16orf45Q96MC5 204 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-202ENST00000372216 ABCA8O94911 1581 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 ZNF532Q9HCE3 1301 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 LPXNO60711 386 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 CAVIN2O95810 425 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 UAP1Q16222 522 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-202ENST00000372216 UVSSAQ2YD98 709 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 CTR9Q6PD62 1173 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 OTUD7AQ8TE49 926 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-202ENST00000372216 IQCGQ9H095 443 aaKnown RBP11.03□□□□□ -0.64
COL4A6-202ENST00000372216 IVNS1ABPQ9Y6Y0 642 aa11.03□□□□□ -0.64
COL4A6-202ENST00000372216 METP08581 1390 aa11.02□□□□□ -0.64
COL4A6-202ENST00000372216 SNX16P57768 344 aa11.02□□□□□ -0.64
COL4A6-202ENST00000372216 KIAA0753Q2KHM9 967 aa11.02□□□□□ -0.64
COL4A6-202ENST00000372216 RNF169Q8NCN4 708 aa11.02□□□□□ -0.64
COL4A6-202ENST00000372216 FAM135BQ49AJ0 1406 aa11.02□□□□□ -0.64
COL4A6-202ENST00000372216 BICDL2A1A5D9 508 aa11.02□□□□□ -0.64
COL4A6-202ENST00000372216 CRCPO75575 148 aa11.02□□□□□ -0.64
COL4A6-202ENST00000372216 TPD52P55327 224 aaPredicted RBP11.02□□□□□ -0.64
COL4A6-202ENST00000372216 GTF2IP78347 998 aa11.02□□□□□ -0.64
COL4A6-202ENST00000372216 FAM227BQ96M60 508 aa11.02□□□□□ -0.64
COL4A6-202ENST00000372216 CCDC114Q96M63 670 aa11.02□□□□□ -0.64
COL4A6-202ENST00000372216 VWA3AA6NCI4 1184 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 H7C1D1 291 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 KLHL40Q2TBA0 621 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 FAM47CQ5HY64 1035 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 SNX21Q969T3 373 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 USP26Q9BXU7 913 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 TTC12Q9H892 705 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-202ENST00000372216 CCT6AP40227 531 aaKnown RBP11.02□□□□□ -0.65
COL4A6-202ENST00000372216 IFRD2Q12894 506 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-202ENST00000372216 SNW1Q13573 536 aaKnown RBP11.02□□□□□ -0.65
COL4A6-202ENST00000372216 DCAF17Q5H9S7 520 aaPredicted RBP11.02□□□□□ -0.65
COL4A6-202ENST00000372216 PIK3AP1Q6ZUJ8 805 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 ARHGAP27Q6ZUM4 889 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 USP40Q9NVE5 1235 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 TTLL3Q9Y4R7 772 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 CEP83Q9Y592 693 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 PNMA6EA0A0J9YXQ4 647 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 CCDC160A6NGH7 325 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 USH1GQ495M9 461 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 GTF3C6Q969F1 213 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 MAK16Q9BXY0 300 aaKnown RBP11.02□□□□□ -0.65
COL4A6-202ENST00000372216 KDM5CP41229 1560 aa11.02□□□□□ -0.65
COL4A6-202ENST00000372216 GOLGA6L9A6NEM1 432 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 DEXIO95424 95 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 RXRBP28702 533 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 SPAG1Q07617 926 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 ZNF772Q68DY9 489 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-202ENST00000372216 HS2ST1Q7LGA3 356 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 SMC5Q8IY18 1101 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 TRIM6Q9C030 488 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-202ENST00000372216 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL4A6-202ENST00000372216 TTC37Q6PGP7 1564 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 KDRP35968 1356 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 RPS8P62241 208 aaKnown RBP11.01□□□□□ -0.65
COL4A6-202ENST00000372216 C8orf34Q49A92 452 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-202ENST00000372216 TBC1D22AQ8WUA7 517 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 DNAJC25Q9H1X3 360 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 TRIM37O94972 964 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 SV2BQ7L1I2 683 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 KIAA0232Q92628 1395 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 HECW2Q9P2P5 1572 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 CYLC1P35663 651 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-202ENST00000372216 EHBP1Q8NDI1 1231 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 AOX1Q06278 1338 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-202ENST00000372216 STX17P56962 302 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 CCDC25Q86WR0 208 aa11.01□□□□□ -0.65
COL4A6-202ENST00000372216 PPANQ9NQ55 473 aaKnown RBP11.01□□□□□ -0.65
COL4A6-202ENST00000372216 TTF2Q9UNY4 1162 aaKnown RBP11.01□□□□□ -0.65
COL4A6-202ENST00000372216 V9GY48 417 aaPredicted RBP11.01□□□□□ -0.65
COL4A6-202ENST00000372216 CCDC169A6NNP5 214 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 DOK7Q18PE1 504 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 USPL1Q5W0Q7 1092 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 TTLL7Q6ZT98 887 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 CAPZA3Q96KX2 299 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 SELENOSQ9BQE4 189 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 NOP56O00567 594 aaKnown RBP11□□□□□ -0.65
COL4A6-202ENST00000372216 SLC1A4P43007 532 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 FAM200AQ8TCP9 573 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 SLU7O95391 586 aaKnown RBP11□□□□□ -0.65
COL4A6-202ENST00000372216 GIGYF1O75420 1035 aaPredicted RBP11□□□□□ -0.65
COL4A6-202ENST00000372216 BRDTQ58F21 947 aaPredicted RBP11□□□□□ -0.65
COL4A6-202ENST00000372216 UBXN1Q04323 297 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 CPXCR1Q8N123 301 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 SMC1BQ8NDV3 1235 aa11□□□□□ -0.65
COL4A6-202ENST00000372216 SREK1Q8WXA9 508 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms