RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 FGAP02671 866 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 CYP21A2P08686 494 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 GSDMDP57764 484 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 SF3B2Q13435 895 aaKnown RBP10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 CNKSR2Q8WXI2 1034 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 APPBP2Q92624 585 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 GREM2Q9H772 168 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 ZBTB21Q9ULJ3 1066 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 C1orf167Q5SNV9 1468 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 PXDNQ92626 1479 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 PHRF1Q9P1Y6 1649 aaKnown RBP10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 PHKA1P46020 1223 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 LMAN1P49257 510 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 CPSF1Q10570 1443 aaKnown RBP10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 ANO1Q5XXA6 986 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 KRT40Q6A162 431 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 ZNF397Q8NF99 534 aaPredicted RBP10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 INCENPQ9NQS7 918 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 ANGEL1Q9UNK9 670 aaKnown RBP10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 ZNF202O95125 648 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 HSPD1P10809 573 aaKnown RBP10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 TAF4BQ92750 862 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 BLZF1Q9H2G9 400 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 ZNF287Q9HBT7 754 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 FAM160A1Q05DH4 1040 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 TCP10Q12799 353 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 SF3A3Q12874 501 aaKnown RBP eCLIP10.37□□□□□ -0.758e-7■■■■■ 27.4
SMARCA1-202ENST00000371122 TPTE2Q6XPS3 522 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 CCDC191Q8NCU4 936 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 CALML4Q96GE6 196 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 GDAP1L1Q96MZ0 367 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 SLAIN2Q9P270 581 aa10.37□□□□□ -0.75
SMARCA1-202ENST00000371122 ANKRD62A6NC57 917 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 DYNC1I1O14576 645 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 ZNF853P0CG23 659 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 TMEM266Q2M3C6 531 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 CTNNBL1Q8WYA6 563 aaPredicted RBP10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 VEZTQ9HBM0 779 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 GOPCQ9HD26 462 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 CCDC66A2RUB6 948 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 SASH1O94885 1247 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 SETQ01105 290 aaPredicted RBP10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 PNOCQ13519 176 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 MAPKAPK5Q8IW41 473 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 CCDC148Q8NFR7 591 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 ZC3H12CQ9C0D7 883 aaKnown RBP10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 LSG1Q9H089 658 aaKnown RBP10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 SEC31BQ9NQW1 1179 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 KCNH3Q9ULD8 1083 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 BTBD18B2RXH4 712 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 LDHCP07864 332 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 CALM1P0DP23 149 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 CALM2P0DP24 149 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 CALM3P0DP25 149 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 ZNF445P59923 1031 aa10.36□□□□□ -0.75
SMARCA1-202ENST00000371122 IBTKQ9P2D0 1353 aaPredicted RBP10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 USP17L12C9JPN9 530 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 USP17L21D6R901 530 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 PTPROQ16827 1216 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 PLCD4Q9BRC7 762 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 TBC1D7Q9P0N9 293 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 ZBTB1Q9Y2K1 713 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 RTCBQ9Y3I0 505 aaKnown RBP10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 PCDH11XQ9BZA7 1347 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 PCDH11YQ9BZA8 1340 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 KIF20BQ96Q89 1820 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 ATP2C2O75185 946 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 GOLGA8HP0CJ92 632 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 CDC25AP30304 524 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 ZNF569Q5MCW4 686 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 FCHSD1Q86WN1 690 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 EXOC1Q9NV70 894 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 ATP5JP18859 108 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 KRI1Q8N9T8 703 aaKnown RBP10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 RGS22Q8NE09 1264 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 CNNM2Q9H8M5 875 aa10.35□□□□□ -0.75
SMARCA1-202ENST00000371122 GOLGA6L10A6NI86 522 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 LDHBP07195 334 aaKnown RBP10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 ADKP55263 362 aaKnown RBP10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 UBXN1Q04323 297 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 SCRN1Q12765 414 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 TCIRG1Q13488 830 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 MAEAQ7L5Y9 396 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 LUC7LQ9NQ29 371 aaKnown RBP10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 PIK3C2AO00443 1686 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 PRKAB2O43741 272 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 EIF3JO75822 258 aaKnown RBP10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 DESI2Q9BSY9 194 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 HELLSQ9NRZ9 838 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 NFE2L3Q9Y4A8 694 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 CYP2D7A0A087X1C5 515 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 TXKP42681 527 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 DYMQ7RTS9 669 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 SPAG5Q96R06 1193 aa10.34□□□□□ -0.75
SMARCA1-202ENST00000371122 ARHGEF25Q86VW2 580 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 SYCP3Q8IZU3 236 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 SPATA5Q8NB90 893 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 RAB34Q9BZG1 259 aa10.33□□□□□ -0.76
SMARCA1-202ENST00000371122 XPO4Q9C0E2 1151 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms