RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 ABCA9Q8IUA7 1624 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 HLA-DOAP06340 250 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 RHOXF2BP0C7M4 288 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 KRT83P78385 493 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 ZMYM1Q5SVZ6 1142 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 PIK3AP1Q6ZUJ8 805 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 RHOXF2Q9BQY4 288 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 LUC7L2Q9Y383 392 aaKnown RBP13.23□□□□□ -0.29
COPA-202ENST00000368069 PPP2R3AQ06190 1150 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 ZDHHC9Q9Y397 364 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 SYNRGQ9UMZ2 1314 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 KRT86O43790 486 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 TRMT44Q8IYL2 757 aaKnown RBP13.23□□□□□ -0.29
COPA-202ENST00000368069 NSUN7Q8NE18 718 aaKnown RBP13.23□□□□□ -0.29
COPA-202ENST00000368069 CARD6Q9BX69 1037 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 NYXQ9GZU5 481 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 VPS16Q9H269 839 aa13.23□□□□□ -0.29
COPA-202ENST00000368069 ADORA1P30542 326 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 AKNAD1Q5T1N1 836 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 MRFAP1L1Q96HT8 127 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 CAPZA3Q96KX2 299 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 NRBP1Q9UHY1 535 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 MROH5Q6ZUA9 1318 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 hCG_1642624A0A1W2PR95 340 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 NDUFA8P51970 172 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 CTSWP56202 376 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 PICALMQ13492 652 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 TDRD7Q8NHU6 1098 aaKnown RBP13.22□□□□□ -0.29
COPA-202ENST00000368069 TIGD1Q96MW7 591 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 CLIC4Q9Y696 253 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 F8W031 263 aaPredicted RBP13.22□□□□□ -0.29
COPA-202ENST00000368069 TACC1O75410 805 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 KIF5AQ12840 1032 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 TTC38Q5R3I4 469 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 TPTE2Q6XPS3 522 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 ZNF804AQ7Z570 1209 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 RRP36Q96EU6 259 aaKnown RBP13.22□□□□□ -0.29
COPA-202ENST00000368069 CCDC42Q96M95 316 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 BICDL2A1A5D9 508 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 ARHGAP6O43182 974 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 LDHBP07195 334 aaKnown RBP13.22□□□□□ -0.29
COPA-202ENST00000368069 PDE6AP16499 860 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 MTX1Q13505 466 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 TNIP1Q15025 636 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 ZFP91Q96JP5 570 aaPredicted RBP13.22□□□□□ -0.29
COPA-202ENST00000368069 FTOQ9C0B1 505 aaKnown RBP eCLIP13.22□□□□□ -0.29
COPA-202ENST00000368069 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
COPA-202ENST00000368069 MAPK8IP1Q9UQF2 711 aa13.22□□□□□ -0.29
COPA-202ENST00000368069 MAST3O60307 1309 aa13.21□□□□□ -0.29
COPA-202ENST00000368069 PTPN12Q05209 780 aaKnown RBP13.21□□□□□ -0.29
COPA-202ENST00000368069 CLEC17AQ6ZS10 378 aa13.21□□□□□ -0.29
COPA-202ENST00000368069 LRRC8AQ8IWT6 810 aa13.21□□□□□ -0.29
COPA-202ENST00000368069 TMEM87AQ8NBN3 555 aa13.21□□□□□ -0.29
COPA-202ENST00000368069 SPAG5Q96R06 1193 aa13.21□□□□□ -0.29
COPA-202ENST00000368069 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
COPA-202ENST00000368069 SERTAD1Q9UHV2 236 aa13.21□□□□□ -0.29
COPA-202ENST00000368069 INO80Q9ULG1 1556 aaPredicted RBP13.21□□□□□ -0.29
COPA-202ENST00000368069 ZMYM6O95789 1325 aa13.21□□□□□ -0.29
COPA-202ENST00000368069 IFFO1Q0D2I5 559 aa13.21□□□□□ -0.3
COPA-202ENST00000368069 FBXO18Q8NFZ0 1043 aa13.21□□□□□ -0.3
COPA-202ENST00000368069 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.21□□□□□ -0.32e-8■■□□□ 12.3
COPA-202ENST00000368069 ARHGEF40Q8TER5 1519 aa13.21□□□□□ -0.3
COPA-202ENST00000368069 CMA1P23946 247 aa13.21□□□□□ -0.3
COPA-202ENST00000368069 TNNI2P48788 182 aa13.21□□□□□ -0.3
COPA-202ENST00000368069 GPR108Q9NPR9 543 aa13.21□□□□□ -0.3
COPA-202ENST00000368069 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.3
COPA-202ENST00000368069 BCCIPQ9P287 314 aaKnown RBP eCLIP13.21□□□□□ -0.3
COPA-202ENST00000368069 PTPRMP28827 1452 aa13.2□□□□□ -0.3
COPA-202ENST00000368069 PCCAP05165 728 aaPredicted RBP13.2□□□□□ -0.3
COPA-202ENST00000368069 SSR1P43307 286 aaKnown RBP13.2□□□□□ -0.3
COPA-202ENST00000368069 ST5P78524 1137 aa13.2□□□□□ -0.3
COPA-202ENST00000368069 ZBTB38Q8NAP3 1195 aaPredicted RBP13.2□□□□□ -0.3
COPA-202ENST00000368069 GNA11P29992 359 aa13.2□□□□□ -0.3
COPA-202ENST00000368069 KRT79Q5XKE5 535 aa13.2□□□□□ -0.3
COPA-202ENST00000368069 CMTR1Q8N1G2 835 aaKnown RBP13.2□□□□□ -0.3
COPA-202ENST00000368069 ERBB3P21860 1342 aa13.2□□□□□ -0.3
COPA-202ENST00000368069 A0A087WWV3 80 aa13.2□□□□□ -0.3
COPA-202ENST00000368069 M0R2C6 588 aa13.2□□□□□ -0.3
COPA-202ENST00000368069 TBCAO75347 108 aaKnown RBP13.2□□□□□ -0.3
COPA-202ENST00000368069 LETM2Q2VYF4 491 aa13.2□□□□□ -0.3
COPA-202ENST00000368069 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
COPA-202ENST00000368069 RTEL1Q9NZ71 1219 aa13.2□□□□□ -0.3
COPA-202ENST00000368069 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
COPA-202ENST00000368069 USP8P40818 1118 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 PRPF4BQ13523 1007 aaKnown RBP13.19□□□□□ -0.3
COPA-202ENST00000368069 MAATS1Q7Z4T9 603 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 NOSTRINQ8IVI9 506 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 IFNL3Q8IZI9 196 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 STAMQ92783 540 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 CAMSAP1Q5T5Y3 1602 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 CCDC113Q9H0I3 377 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 GOPCQ9HD26 462 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 KIAA1210Q9ULL0 1709 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 NEFHP12036 1026 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 HIBADHP31937 336 aaKnown RBP13.19□□□□□ -0.3
COPA-202ENST00000368069 CCDC122Q5T0U0 273 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 CCDC87Q9NVE4 849 aa13.19□□□□□ -0.3
COPA-202ENST00000368069 AATFQ9NY61 560 aaKnown RBP eCLIP13.19□□□□□ -0.3
COPA-202ENST00000368069 ERMNQ8TAM6 284 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 200.9 ms