RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 HOXB4P17483 251 aaPredicted RBP5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 HNRNPUQ00839 825 aaKnown RBP eCLIP5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 NFE2L2Q16236 605 aa5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 KIF4BQ2VIQ3 1234 aa5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 TNNI3KQ59H18 835 aa5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 HP1BP3Q5SSJ5 553 aaPredicted RBP5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 LYPD4Q6UWN0 246 aa5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 GK5Q6ZS86 529 aa5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 ZSCAN1Q8NBB4 408 aa5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 ZC3H12CQ9C0D7 883 aaKnown RBP5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 PCDHA4Q9UN74 947 aa5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 PCDHB14Q9Y5E9 798 aa5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 SYNGAP1Q96PV0 1343 aa5.66□□□□□ -1.5
RNU6-28P-201ENST00000362378 LOC100289279A0A1B0GTE1 492 aa5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 TLDC2A0PJX2 215 aa5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 SMAD7O15105 426 aaKnown RBP5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 DEAF1O75398 565 aaPredicted RBP5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 CDK8P49336 464 aa5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 DGKGP49619 791 aa5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 INPP5AQ14642 412 aa5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 ZNF746Q6NUN9 644 aaPredicted RBP5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 LRFN4Q6PJG9 635 aa5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 HDXQ7Z353 690 aa5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 DMRTC2Q8IXT2 367 aaPredicted RBP5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 FAM169BQ8N8A8 192 aa5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 DCAF11Q8TEB1 546 aa5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 HNRNPLLQ8WVV9 542 aaKnown RBP5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 ACSBG1Q96GR2 724 aa5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 CRBNQ96SW2 442 aa5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 CDK11AQ9UQ88 783 aaPredicted RBP5.65□□□□□ -1.5
RNU6-28P-201ENST00000362378 MEIS3P2A8K0S8 358 aa5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 K7ELQ4 463 aaPredicted RBP5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 ADAM11O75078 769 aa5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 AMPD1P23109 780 aa5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 CD68P34810 354 aaPredicted RBP5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 CASP7P55210 303 aa5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 PDE3AQ14432 1141 aa5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 LRRFIP1Q32MZ4 808 aaKnown RBP5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 FOXD4L6Q3SYB3 417 aaPredicted RBP5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 WIPI1Q5MNZ9 446 aaPredicted RBP5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 FBXW10Q5XX13 1052 aa5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 FOXD4L3Q6VB84 417 aaPredicted RBP5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 CYFIP1Q7L576 1253 aa5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 LRP10Q7Z4F1 713 aa5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 LSRQ86X29 649 aaPredicted RBP5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 WDR89Q96FK6 387 aaPredicted RBP5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 PLPPR2Q96GM1 343 aa5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 TRIM55Q9BYV6 548 aa5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 TMA7Q9Y2S6 64 aaKnown RBP5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 TBX22Q9Y458 520 aa5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 PCDHGC5Q9Y5F6 944 aa5.64□□□□□ -1.51
RNU6-28P-201ENST00000362378 DDX3YO15523 660 aaKnown RBP5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 GRIN3BO60391 1043 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 HTR3BO95264 441 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 DLGAP3O95886 979 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 LIG1P18858 919 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 LORP23490 312 aaPredicted RBP5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 GMPRP36959 345 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 NLRP12P59046 1061 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 RING1Q06587 406 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 BMS1Q14692 1282 aaKnown RBP5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 ZC3H12AQ5D1E8 599 aaKnown RBP5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 FBXO11Q86XK2 927 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 C19orf47Q8N9M1 422 aaKnown RBP5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 MRFAP1L1Q96HT8 127 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 WDR18Q9BV38 432 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 USP26Q9BXU7 913 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 KCNK4Q9NYG8 393 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 MSRB2Q9Y3D2 182 aa5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 R3HCC1Q9Y3T6 440 aaKnown RBP5.63□□□□□ -1.51
RNU6-28P-201ENST00000362378 DLL1O00548 723 aa5.62□□□□□ -1.51
RNU6-28P-201ENST00000362378 U2SURPO15042 1029 aaKnown RBP5.62□□□□□ -1.51
RNU6-28P-201ENST00000362378 AOC2O75106 756 aa5.62□□□□□ -1.51
RNU6-28P-201ENST00000362378 SLFN14P0C7P3 912 aa5.62□□□□□ -1.51
RNU6-28P-201ENST00000362378 EXOSC6Q5RKV6 272 aaKnown RBP5.62□□□□□ -1.51
RNU6-28P-201ENST00000362378 TMEM201Q5SNT2 666 aa5.62□□□□□ -1.51
RNU6-28P-201ENST00000362378 TAB3Q8N5C8 712 aaPredicted RBP5.62□□□□□ -1.51
RNU6-28P-201ENST00000362378 WHAMMQ8TF30 809 aa5.62□□□□□ -1.51
RNU6-28P-201ENST00000362378 ELMO3Q96BJ8 720 aa5.62□□□□□ -1.51
RNU6-28P-201ENST00000362378 TM9SF2Q99805 663 aa5.62□□□□□ -1.51
RNU6-28P-201ENST00000362378 CCDC113Q9H0I3 377 aa5.62□□□□□ -1.51
RNU6-28P-201ENST00000362378 ACTR10Q9NZ32 417 aa5.62□□□□□ -1.51
RNU6-28P-201ENST00000362378 MEGF11A6BM72 1044 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 DCDC2CA8MYV0 355 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 ERVK-24P63145 666 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 PDE4BQ07343 736 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 KCNMA1Q12791 1236 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 RASA3Q14644 834 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 TRAPPC3LQ5T215 181 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 ZNF385CQ66K41 422 aaPredicted RBP5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 FMR1NBQ8N0W7 255 aaPredicted RBP5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 CELF2-AS1Q8N7Q2 184 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 TMEM40Q8WWA1 233 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 SNTG2Q9NY99 539 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 REV1Q9UBZ9 1251 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 ADAM30Q9UKF2 790 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 CORINQ9Y5Q5 1042 aa5.61□□□□□ -1.51
RNU6-28P-201ENST00000362378 A0A0A0MRY4 1105 aa5.6□□□□□ -1.51
RNU6-28P-201ENST00000362378 PLCG1P19174 1290 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms