RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 THAP3Q8WTV1 239 aaPredicted RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 RBSNQ9H1K0 784 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 RABGEF1Q9UJ41 708 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 NPTXRO95502 500 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 PHKG2P15735 406 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 VARSP26640 1264 aaKnown RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 SARSP49591 514 aaKnown RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 EFR3AQ14156 821 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 GRM2Q14416 872 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 CBX2Q14781 532 aaPredicted RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 C16orf86Q6ZW13 317 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 NOL8Q76FK4 1167 aaKnown RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 UBE2Q1Q7Z7E8 422 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 CCDC146Q8IYE0 955 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 SYT17Q9BSW7 474 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 STIM2Q9P246 746 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 STRIP2Q9ULQ0 834 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 ATP10AO60312 1499 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 F5H0A9 414 aaPredicted RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 EIF1AYO14602 144 aaKnown RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 ZBTB48P10074 688 aaPredicted RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 IL6STP40189 918 aaPredicted RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 PLA2G2CQ5R387 149 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 GPR155Q7Z3F1 870 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 REXO1Q8N1G1 1221 aaKnown RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 DDX1Q92499 740 aaKnown RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 PTPN18Q99952 460 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 NCOA5Q9HCD5 579 aaKnown RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 INTS7Q9NVH2 962 aaKnown RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 POLIQ9UNA4 740 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 PHLPP1O60346 1717 aa2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 SIPA1L3O60292 1781 aaPredicted RBP2.6□□□□□ -1.99
SMARCAD1-202ENST00000359052 ALS2Q96Q42 1657 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 CHL1O00533 1208 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 ATP6V1AP38606 617 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 ZNF362Q5T0B9 420 aaPredicted RBP2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 SCARA3Q6AZY7 606 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 FAM196AQ6ZSG2 479 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 SPATC1Q76KD6 591 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 PNMA2Q9UL42 364 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 LRRC7Q96NW7 1537 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 KIF3BO15066 747 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 PRC1O43663 620 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 HOXB1P14653 301 aaPredicted RBP2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 GTF2IP78347 998 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 SKOR1P84550 965 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 ZNF454Q8N9F8 522 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 UPF1Q92900 1129 aaKnown RBP eCLIP2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 ZNF594Q96JF6 807 aaPredicted RBP2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 TSPAN10Q9H1Z9 355 aaPredicted RBP2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 ANO2Q9NQ90 1003 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 NDFIP2Q9NV92 336 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 RNF123Q5XPI4 1314 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 WASHC2AQ641Q2 1341 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 NLRP1Q9C000 1473 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 COL18A1P39060 1754 aa2.59□□□□□ -1.99
SMARCAD1-202ENST00000359052 SKIP12755 728 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 RPS26P62854 115 aaKnown RBP2.59□□□□□ -2
SMARCAD1-202ENST00000359052 PIN1Q13526 163 aaPredicted RBP2.59□□□□□ -2
SMARCAD1-202ENST00000359052 CDK13Q14004 1512 aaKnown RBP2.59□□□□□ -2
SMARCAD1-202ENST00000359052 SWT1Q5T5J6 900 aaKnown RBP2.59□□□□□ -2
SMARCAD1-202ENST00000359052 MZT2AQ6P582 158 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 MILR1Q7Z6M3 343 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 C14orf80Q86SX3 495 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 DDX42Q86XP3 938 aaKnown RBP eCLIP2.59□□□□□ -2
SMARCAD1-202ENST00000359052 EPS8L3Q8TE67 593 aaKnown RBP2.59□□□□□ -2
SMARCAD1-202ENST00000359052 TBC1D20Q96BZ9 403 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 TMEM74Q96NL1 305 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 KBTBD4Q9NVX7 518 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 PLAGL2Q9UPG8 496 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 SHANK2Q9UPX8 1470 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 PLA2R1Q13018 1463 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 YEATS2Q9ULM3 1422 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 WNT9AO14904 365 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 MAN1A1P33908 653 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 NTRK3Q16288 839 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 TMEM87AQ8NBN3 555 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 ADAM32Q8TC27 787 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 ZSWIM4Q9H7M6 989 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 PRDM9Q9NQV7 894 aa2.59□□□□□ -2
SMARCAD1-202ENST00000359052 TISP43B9A030 160 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 B9A039 149 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 TRAF5O00463 557 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 FMNL1O95466 1100 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-202ENST00000359052 IGBP1P78318 339 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 SETQ01105 290 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-202ENST00000359052 TAF1CQ15572 869 aaPredicted RBP2.58□□□□□ -2
SMARCAD1-202ENST00000359052 HYIQ5T013 277 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 OTOP3Q7RTS5 596 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 RASSF1Q9NS23 344 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 TMEM63CQ9P1W3 806 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 NOD1Q9Y239 953 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 PLAAQ9Y263 795 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 BTF3P20290 206 aaKnown RBP2.58□□□□□ -2
SMARCAD1-202ENST00000359052 MMRN1Q13201 1228 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 PRICKLE4Q2TBC4 344 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 FAM26FQ5R3K3 315 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 NEK10Q6ZWH5 1172 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 ANKLE2Q86XL3 938 aa2.58□□□□□ -2
SMARCAD1-202ENST00000359052 ERP27Q96DN0 273 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms