RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 KDM5BQ9UGL1 1544 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 TRIM4Q9C037 500 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 TFIP11Q9UBB9 837 aaKnown RBP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 ABCD1P33897 745 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 CNKSR2Q8WXI2 1034 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 EIF2AQ9BY44 585 aaKnown RBP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 CACNA1BQ00975 2339 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 IFIT3O14879 490 aaKnown RBP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 PRC1O43663 620 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 LMNAP02545 664 aaKnown RBP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 TRAPPC10P48553 1259 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 TMEM132AQ24JP5 1023 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 CCDC68Q9H2F9 335 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 N4BP1O75113 896 aaKnown RBP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 IKQ13123 557 aaPredicted RBP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 GLE1Q53GS7 698 aaKnown RBP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 ICE2Q659A1 982 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 ARHGAP18Q8N392 663 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 C3orf20Q8ND61 904 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 BRF1Q92994 677 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 BCCIPQ9P287 314 aaKnown RBP eCLIP7.33□□□□□ -1.243e-8■■■■■ 27.3
VPS13B-202ENST00000357162 GPATCH8Q9UKJ3 1502 aaKnown RBP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 INF2Q27J81 1249 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 PABPN1LA6NDY0 278 aaKnown RBP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 GIMAP6Q6P9H5 292 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 KIRREL3Q8IZU9 778 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 C1orf115Q9H7X2 142 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 TYW1Q9NV66 732 aaKnown RBP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 PTPRZ1P23471 2315 aaPredicted RBP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 ZNF76P36508 570 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 FKBP4Q02790 459 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS13B-202ENST00000357162 SLC9C1Q4G0N8 1177 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 HAUS3Q68CZ6 603 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 PPCSQ9HAB8 311 aa7.33□□□□□ -1.24
VPS13B-202ENST00000357162 STK10O94804 968 aaKnown RBP7.32□□□□□ -1.24
VPS13B-202ENST00000357162 DAAM1Q9Y4D1 1078 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 SYNRGQ9UMZ2 1314 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 SPDYE4A6NLX3 237 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 SART1O43290 800 aaKnown RBP7.32□□□□□ -1.24
VPS13B-202ENST00000357162 SUN1O94901 812 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 BRD2P25440 801 aaKnown RBP7.32□□□□□ -1.24
VPS13B-202ENST00000357162 PLEKHM2Q8IWE5 1019 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 HNRNPCL1O60812 293 aaKnown RBP7.32□□□□□ -1.24
VPS13B-202ENST00000357162 PPP1R42Q7Z4L9 355 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 FAM81BQ96LP2 452 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 SOS2Q07890 1332 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-202ENST00000357162 A0A1B0GVL5 298 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 RRAGBQ5VZM2 374 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 IWS1Q96ST2 819 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 TRIM35Q9UPQ4 493 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 CNPY2Q9Y2B0 182 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 FOSBP53539 338 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 ITIH3Q06033 890 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 CUL1Q13616 776 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 TMEM67Q5HYA8 995 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 SPZ1Q9BXG8 430 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 SPTLC3Q9NUV7 552 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 ATP6V0A2Q9Y487 856 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 MAGEA9P43362 315 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 DDX23Q9BUQ8 820 aaKnown RBP7.32□□□□□ -1.24
VPS13B-202ENST00000357162 HELLSQ9NRZ9 838 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 FGFR1OP2Q9NVK5 253 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-202ENST00000357162 METTL24Q5JXM2 366 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 ZNF713Q8N859 430 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-202ENST00000357162 CEP104O60308 925 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 CABP4P57796 275 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 WTAPQ15007 396 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 IDEP14735 1019 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 RHPN1Q8TCX5 695 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 SECISBP2LQ93073 1101 aaKnown RBP7.32□□□□□ -1.24
VPS13B-202ENST00000357162 ASIC1P78348 528 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 TDRD7Q8NHU6 1098 aaKnown RBP7.32□□□□□ -1.24
VPS13B-202ENST00000357162 MBIPQ9NS73 344 aa7.32□□□□□ -1.24
VPS13B-202ENST00000357162 DYNC1I2Q13409 638 aaKnown RBP7.32□□□□□ -1.24
VPS13B-202ENST00000357162 SSBP05455 408 aaKnown RBP eCLIP7.31□□□□□ -1.24
VPS13B-202ENST00000357162 BANK1Q8NDB2 785 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 CRNKL1Q9BZJ0 848 aaKnown RBP7.31□□□□□ -1.24
VPS13B-202ENST00000357162 SSX2IPQ9Y2D8 614 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 GRIN2AQ12879 1464 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 PTGS1P23219 599 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 SKIP12755 728 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 PSMD7P51665 324 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 MXRA7P84157 204 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 ELF2Q15723 593 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 CENPKQ9BS16 269 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 ANXA13P27216 316 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 EPHB4P54760 987 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 LIN9Q5TKA1 542 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 NBPF6Q5VWK0 638 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 NBPF4Q96M43 638 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 CAPS2Q9BXY5 557 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 BATF3Q9NR55 127 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 THAP12O43422 761 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 MGEA5O60502 916 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 ADALQ6DHV7 355 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 JRKLQ9Y4A0 524 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 RASEFQ8IZ41 740 aa7.31□□□□□ -1.24
VPS13B-202ENST00000357162 AOPEPQ8N6M6 819 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms