RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 HOXB7P09629 217 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 TPD52L1Q16890 204 aaPredicted RBP8.8□□□□□ -1
C11orf54-202ENST00000354421 RBM26Q5T8P6 1007 aaKnown RBP8.8□□□□□ -1
C11orf54-202ENST00000354421 CEP135Q66GS9 1140 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 ZNF771Q7L3S4 317 aaPredicted RBP8.8□□□□□ -1
C11orf54-202ENST00000354421 NECAB1Q8N987 351 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 MAP4K1Q92918 833 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 MRFAP1L1Q96HT8 127 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 GPATCH3Q96I76 525 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 MRGPRX2Q96LB1 330 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 SPATA32Q96LK8 384 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 C16orf45Q96MC5 204 aaPredicted RBP8.8□□□□□ -1
C11orf54-202ENST00000354421 CHMP4AQ9BY43 222 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 CLIP2Q9UDT6 1046 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 BCS1LQ9Y276 419 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 RBM8AQ9Y5S9 174 aaKnown RBP8.8□□□□□ -1
C11orf54-202ENST00000354421 PASKQ96RG2 1323 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 GOLGA6L4A6NEF3 574 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 SLC27A2O14975 620 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 SNRPBP14678 240 aaKnown RBP8.8□□□□□ -1
C11orf54-202ENST00000354421 ZNF165P49910 485 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 IQCB1Q15051 598 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 CAMK4Q16566 473 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 TSGA10IPQ3SY00 556 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 BEND3Q5T5X7 828 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 RNF20Q5VTR2 975 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 ERC1Q8IUD2 1116 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 CKAP2LQ8IYA6 745 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 KRT222Q8N1A0 295 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 IL17REQ8NFR9 667 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 KRTAP4-8Q9BYQ9 185 aa8.8□□□□□ -1
C11orf54-202ENST00000354421 RESTQ13127 1097 aa8.79□□□□□ -1
C11orf54-202ENST00000354421 CCDC144BQ3MJ40 725 aa8.79□□□□□ -1
C11orf54-202ENST00000354421 HDGFL1Q5TGJ6 251 aa8.79□□□□□ -1
C11orf54-202ENST00000354421 COL23A1Q86Y22 540 aaPredicted RBP8.79□□□□□ -1
C11orf54-202ENST00000354421 LRRC8AQ8IWT6 810 aa8.79□□□□□ -1
C11orf54-202ENST00000354421 CCDC144CPQ8IYA2 1237 aa8.79□□□□□ -1
C11orf54-202ENST00000354421 CLASRPQ8N2M8 674 aaKnown RBP8.79□□□□□ -1
C11orf54-202ENST00000354421 ERO1AQ96HE7 468 aa8.79□□□□□ -1
C11orf54-202ENST00000354421 PGBD1Q96JS3 809 aa8.79□□□□□ -1
C11orf54-202ENST00000354421 PHAXQ9H814 394 aaKnown RBP8.79□□□□□ -1
C11orf54-202ENST00000354421 IGSF5Q9NSI5 407 aa8.79□□□□□ -1
C11orf54-202ENST00000354421 GLTPD2A6NH11 291 aa8.78□□□□□ -1
C11orf54-202ENST00000354421 J3QL48 77 aa8.78□□□□□ -1
C11orf54-202ENST00000354421 KIF2AO00139 706 aaPredicted RBP8.78□□□□□ -1
C11orf54-202ENST00000354421 CTAGE5O15320 804 aa8.78□□□□□ -1
C11orf54-202ENST00000354421 GPR37O15354 613 aa8.78□□□□□ -1
C11orf54-202ENST00000354421 RPS6KB1P23443 525 aa8.78□□□□□ -1
C11orf54-202ENST00000354421 TERF2Q15554 542 aa8.78□□□□□ -1
C11orf54-202ENST00000354421 SLC27A3Q5K4L6 730 aa8.78□□□□□ -1
C11orf54-202ENST00000354421 BLOC1S2Q6QNY1 142 aa8.78□□□□□ -1
C11orf54-202ENST00000354421 FERMT3Q86UX7 667 aa8.78□□□□□ -1
C11orf54-202ENST00000354421 DNAAF4Q8WXU2 420 aa8.78□□□□□ -1
C11orf54-202ENST00000354421 DNAJC25Q9H1X3 360 aa8.78□□□□□ -1
C11orf54-202ENST00000354421 ZC3H4Q9UPT8 1303 aaKnown RBP8.78□□□□□ -1
C11orf54-202ENST00000354421 CASP8AP2Q9UKL3 1982 aa8.77□□□□□ -1
C11orf54-202ENST00000354421 ALDH1L1O75891 902 aa8.77□□□□□ -1
C11orf54-202ENST00000354421 DXOO77932 396 aaKnown RBP8.77□□□□□ -1
C11orf54-202ENST00000354421 NBPF7P0C2Y1 421 aaPredicted RBP8.77□□□□□ -1
C11orf54-202ENST00000354421 WNT7BP56706 349 aa8.77□□□□□ -1
C11orf54-202ENST00000354421 TOB2Q14106 344 aaPredicted RBP8.77□□□□□ -1
C11orf54-202ENST00000354421 NAA30Q147X3 362 aaPredicted RBP8.77□□□□□ -1
C11orf54-202ENST00000354421 FAM173BQ6P4H8 233 aa8.77□□□□□ -1
C11orf54-202ENST00000354421 HMG20BQ9P0W2 317 aa8.77□□□□□ -1
C11orf54-202ENST00000354421 TFIP11Q9UBB9 837 aaKnown RBP8.77□□□□□ -1
C11orf54-202ENST00000354421 HDAC5Q9UQL6 1122 aa8.77□□□□□ -1
C11orf54-202ENST00000354421 CHMP3Q9Y3E7 222 aa8.77□□□□□ -1
C11orf54-202ENST00000354421 CCDC66A2RUB6 948 aa8.77□□□□□ -1.01
C11orf54-202ENST00000354421 IFIT2P09913 472 aaKnown RBP8.77□□□□□ -1.01
C11orf54-202ENST00000354421 AMPHP49418 695 aa8.77□□□□□ -1.01
C11orf54-202ENST00000354421 NMIQ13287 307 aaPredicted RBP8.77□□□□□ -1.01
C11orf54-202ENST00000354421 OS9Q13438 667 aaPredicted RBP8.77□□□□□ -1.01
C11orf54-202ENST00000354421 PTPN14Q15678 1187 aa8.77□□□□□ -1.01
C11orf54-202ENST00000354421 STX1AQ16623 288 aa8.77□□□□□ -1.01
C11orf54-202ENST00000354421 BICD2Q8TD16 824 aa8.77□□□□□ -1.01
C11orf54-202ENST00000354421 USB1Q9BQ65 265 aaKnown RBP8.77□□□□□ -1.01
C11orf54-202ENST00000354421 ZSCAN16Q9H4T2 348 aaPredicted RBP8.77□□□□□ -1.01
C11orf54-202ENST00000354421 CEMIPQ8WUJ3 1361 aa8.77□□□□□ -1.01
C11orf54-202ENST00000354421 MED23Q9ULK4 1368 aa8.77□□□□□ -1.01
C11orf54-202ENST00000354421 USP54Q70EL1 1684 aa8.77□□□□□ -1.01
C11orf54-202ENST00000354421 KDM3BQ7LBC6 1761 aa8.76□□□□□ -1.01
C11orf54-202ENST00000354421 GOLGA6L19H0YKK7 550 aa8.76□□□□□ -1.01
C11orf54-202ENST00000354421 IGSF3O75054 1194 aa8.76□□□□□ -1.01
C11orf54-202ENST00000354421 SLU7O95391 586 aaKnown RBP8.76□□□□□ -1.01
C11orf54-202ENST00000354421 KCNJ4P48050 445 aa8.76□□□□□ -1.01
C11orf54-202ENST00000354421 EIF4A1P60842 406 aaKnown RBP8.76□□□□□ -1.01
C11orf54-202ENST00000354421 CCZ1BP86790 482 aa8.76□□□□□ -1.01
C11orf54-202ENST00000354421 CCZ1P86791 482 aaPredicted RBP8.76□□□□□ -1.01
C11orf54-202ENST00000354421 USPL1Q5W0Q7 1092 aa8.76□□□□□ -1.01
C11orf54-202ENST00000354421 CCAR2Q8N163 923 aaKnown RBP8.76□□□□□ -1.01
C11orf54-202ENST00000354421 COL26A1Q96A83 441 aa8.76□□□□□ -1.01
C11orf54-202ENST00000354421 ZNF215Q9UL58 517 aaPredicted RBP8.76□□□□□ -1.01
C11orf54-202ENST00000354421 LTBP1Q14766 1721 aa8.76□□□□□ -1.01
C11orf54-202ENST00000354421 USP27XA6NNY8 438 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 DTNBO60941 627 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 TUBB4AP04350 444 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 SKILP12757 684 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 KCNJ6P48051 423 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 GSDMDP57764 484 aa8.75□□□□□ -1.01
C11orf54-202ENST00000354421 USP46P62068 366 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms