RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 ZNRF3Q9ULT6 936 aa2.28□□□□□ -2.05
BRCA1-202ENST00000354071 PITPNM2Q9BZ72 1349 aa2.28□□□□□ -2.05
BRCA1-202ENST00000354071 A0A1W2PQH9 124 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 KIF4AO95239 1232 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 RAPGEF3O95398 923 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 ITPKAP23677 461 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 IRX6P78412 446 aaPredicted RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 CTBSQ01459 385 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 INPP5AQ14642 412 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 BRDTQ58F21 947 aaPredicted RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 TTC6Q86TZ1 520 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 FERMT3Q86UX7 667 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 CLUHP3Q96NS8 147 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 LACRTQ9GZZ8 138 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 CBX8Q9HC52 389 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 SENP2Q9HC62 589 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 CHST12Q9NRB3 414 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 ZMYM5Q9UJ78 669 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 CCDC194A0A1B0GVG4 234 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 FAM83GA6ND36 823 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 ADARB2-AS1A8MUL3 147 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 GPR25O00155 361 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 ADCY3O60266 1144 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 KATNA1O75449 491 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 MAPTP10636 758 aaKnown RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 ITGAEP38570 1179 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 GRIA2P42262 883 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 SSRP1Q08945 709 aaKnown RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 C2orf27AQ580R0 203 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 MAP1SQ66K74 1059 aaPredicted RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 RIPOR1Q6ZS17 1223 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 SV2BQ7L1I2 683 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 THNSL2Q86YJ6 484 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 WDR75Q8IWA0 830 aaKnown RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 TRPM4Q8TD43 1214 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 CCDC8Q9H0W5 538 aaPredicted RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 SH2B1Q9NRF2 756 aaPredicted RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 TBX1O43435 398 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 CILPO75339 1184 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 TBX4P57082 545 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 CCINQ13939 588 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 AXDND1Q5T1B0 1012 aaPredicted RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 LYPD4Q6UWN0 246 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 DHX32Q7L7V1 743 aaKnown RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 VN1R5Q7Z5H4 357 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 WDR89Q96FK6 387 aaPredicted RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 FEZ1Q99689 392 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 TRAK1Q9UPV9 953 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 EID1Q9Y6B2 187 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 A0A087X0B3 334 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 PRPF3O43395 683 aaKnown RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 TPD52L2O43399 206 aaKnown RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 CTSBP07858 339 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 MYCLP1P12525 358 aaPredicted RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 SPEM2Q0P670 501 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 PWP1Q13610 501 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 RASGRF1Q13972 1273 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 C16orf86Q6ZW13 317 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 DDX42Q86XP3 938 aaKnown RBP eCLIP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 EXOC8Q8IYI6 725 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 GMCL1Q96IK5 515 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 EXOC2Q96KP1 924 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 PNMA5Q96PV4 448 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 SMAD5Q99717 465 aaKnown RBP2.27□□□□□ -2.05
BRCA1-202ENST00000354071 MIR1-1HGQ9H1L0 117 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 C11orf16Q9NQ32 467 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 PPM1HQ9ULR3 514 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 TRIM33Q9UPN9 1127 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 KCNH4Q9UQ05 1017 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 ATP8A1Q9Y2Q0 1164 aa2.27□□□□□ -2.05
BRCA1-202ENST00000354071 C11orf95C9JLR9 678 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-202ENST00000354071 CNGA1P29973 690 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 HOMER1Q86YM7 354 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 PRDM6Q9NQX0 595 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 EPB42P16452 691 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 IFRD2Q12894 506 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-202ENST00000354071 CWF19L2Q2TBE0 894 aaKnown RBP2.26□□□□□ -2.05
BRCA1-202ENST00000354071 ZNF468Q5VIY5 522 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-202ENST00000354071 SULF2Q8IWU5 870 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 FAM178BQ8IXR5 827 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 CCDC146Q8IYE0 955 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 CCDC113Q9H0I3 377 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 METTL14Q9HCE5 456 aaKnown RBP2.26□□□□□ -2.05
BRCA1-202ENST00000354071 TLR7Q9NYK1 1049 aaKnown RBP2.26□□□□□ -2.05
BRCA1-202ENST00000354071 STRIP2Q9ULQ0 834 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-202ENST00000354071 CSADQ9Y600 493 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 PDE2AO00408 941 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-202ENST00000354071 PDE8AO60658 829 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 NID1P14543 1247 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 SDSP20132 328 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 COL8A1P27658 744 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 SKOR2Q2VWA4 1001 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-202ENST00000354071 MAP9Q49MG5 647 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 FAM209AQ5JX71 171 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 TDRD10Q5VZ19 366 aaKnown RBP2.26□□□□□ -2.05
BRCA1-202ENST00000354071 CEP135Q66GS9 1140 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 PDZD3Q86UT5 571 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 CRBNQ96SW2 442 aa2.26□□□□□ -2.05
BRCA1-202ENST00000354071 TRIM8Q9BZR9 551 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms