RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 IL27Q8NEV9 243 aa15.07■□□□□ 0
ATXN3-201ENST00000340660 ZBED3Q96IU2 234 aaPredicted RBP15.07■□□□□ 0
ATXN3-201ENST00000340660 PCDHB3Q9Y5E6 796 aa15.07■□□□□ 0
ATXN3-201ENST00000340660 ZDBF2Q9HCK1 2354 aa15.06■□□□□ 0
ATXN3-201ENST00000340660 WDHD1O75717 1129 aaPredicted RBP15.06■□□□□ 0
ATXN3-201ENST00000340660 SHHQ15465 462 aa15.06■□□□□ 0
ATXN3-201ENST00000340660 PARP10Q53GL7 1025 aa15.06■□□□□ 0
ATXN3-201ENST00000340660 KIF6Q6ZMV9 814 aa15.06■□□□□ 0
ATXN3-201ENST00000340660 C9orf50Q5SZB4 431 aa15.05■□□□□ -0
ATXN3-201ENST00000340660 NBPF12Q5TAG4 269 aaPredicted RBP15.05■□□□□ -0
ATXN3-201ENST00000340660 OGFOD1Q8N543 542 aa15.05■□□□□ -0
ATXN3-201ENST00000340660 ZCCHC17Q9NP64 241 aaKnown RBP15.05■□□□□ -0
ATXN3-201ENST00000340660 CEMIPQ8WUJ3 1361 aa15.05■□□□□ -0
ATXN3-201ENST00000340660 DNAH12Q6ZR08 3092 aa15.04■□□□□ -0
ATXN3-201ENST00000340660 TCF20Q9UGU0 1960 aaKnown RBP15.04■□□□□ -0
ATXN3-201ENST00000340660 CFHP08603 1231 aa15.04■□□□□ -0
ATXN3-201ENST00000340660 BMP1P13497 986 aa15.04■□□□□ -0
ATXN3-201ENST00000340660 BLOC1S3Q6QNY0 202 aa15.04■□□□□ -0
ATXN3-201ENST00000340660 GIGYF2Q6Y7W6 1299 aaKnown RBP15.04■□□□□ -0
ATXN3-201ENST00000340660 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.04■□□□□ -01e-11■■■■□ 25.2
ATXN3-201ENST00000340660 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
ATXN3-201ENST00000340660 DACT2Q5SW24 774 aa15.03■□□□□ -0
ATXN3-201ENST00000340660 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.03■□□□□ -0
ATXN3-201ENST00000340660 ZFHX4Q86UP3 3567 aa15.03■□□□□ -0
ATXN3-201ENST00000340660 BAHCC1Q9P281 2608 aa15.02■□□□□ -0
ATXN3-201ENST00000340660 ACTN4O43707 911 aaKnown RBP15.02■□□□□ -0
ATXN3-201ENST00000340660 UFL1O94874 794 aa15.02■□□□□ -0
ATXN3-201ENST00000340660 NEUROD1Q13562 356 aa15.02■□□□□ -0
ATXN3-201ENST00000340660 LRRC26Q2I0M4 334 aa15.02■□□□□ -0
ATXN3-201ENST00000340660 SUPT20HL1Q3ZLR7 823 aa15.02■□□□□ -0
ATXN3-201ENST00000340660 LBHD1Q9BQE6 289 aaPredicted RBP15.02■□□□□ -0
ATXN3-201ENST00000340660 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.02■□□□□ -0
ATXN3-201ENST00000340660 PPP2R3BQ9Y5P8 575 aa15.02■□□□□ -0
ATXN3-201ENST00000340660 CACNA1BQ00975 2339 aa15.01□□□□□ -0.01
ATXN3-201ENST00000340660 SMIM22K7EJ46 135 aa15.01□□□□□ -0.01
ATXN3-201ENST00000340660 FLT3LGP49771 235 aa15.01□□□□□ -0.01
ATXN3-201ENST00000340660 KMT5BQ4FZB7 885 aa15.01□□□□□ -0.01
ATXN3-201ENST00000340660 GPIHBP1Q8IV16 184 aa15.01□□□□□ -0.01
ATXN3-201ENST00000340660 PODXL2Q9NZ53 605 aa15.01□□□□□ -0.01
ATXN3-201ENST00000340660 REV3LO60673 3130 aa15.01□□□□□ -0.01
ATXN3-201ENST00000340660 FCGRTP55899 365 aa15□□□□□ -0.01
ATXN3-201ENST00000340660 VGLL4Q14135 290 aa15□□□□□ -0.01
ATXN3-201ENST00000340660 C5orf42Q9H799 3197 aa14.99□□□□□ -0.01
ATXN3-201ENST00000340660 ZNF804BA4D1E1 1349 aa14.99□□□□□ -0.01
ATXN3-201ENST00000340660 CETPP11597 493 aa14.99□□□□□ -0.01
ATXN3-201ENST00000340660 ZBTB38Q8NAP3 1195 aaPredicted RBP14.99□□□□□ -0.01
ATXN3-201ENST00000340660 KRT37O76014 449 aa14.98□□□□□ -0.01
ATXN3-201ENST00000340660 COL6A1P12109 1028 aa14.98□□□□□ -0.01
ATXN3-201ENST00000340660 AKNAD1Q5T1N1 836 aa14.98□□□□□ -0.01
ATXN3-201ENST00000340660 IRF5Q13568 498 aa14.97□□□□□ -0.01
ATXN3-201ENST00000340660 FBXL18Q96ME1 805 aa14.97□□□□□ -0.01
ATXN3-201ENST00000340660 PRKD2Q9BZL6 878 aa14.97□□□□□ -0.01
ATXN3-201ENST00000340660 GGA1Q9UJY5 639 aa14.97□□□□□ -0.01
ATXN3-201ENST00000340660 OGDHLQ9ULD0 1010 aa14.97□□□□□ -0.01
ATXN3-201ENST00000340660 RRP7AQ9Y3A4 280 aaKnown RBP14.97□□□□□ -0.01
ATXN3-201ENST00000340660 MGAMO43451 1857 aa14.96□□□□□ -0.01
ATXN3-201ENST00000340660 MYL6BP14649 208 aa14.96□□□□□ -0.01
ATXN3-201ENST00000340660 PDE3AQ14432 1141 aa14.96□□□□□ -0.01
ATXN3-201ENST00000340660 CCDC85BQ15834 202 aaPredicted RBP14.96□□□□□ -0.01
ATXN3-201ENST00000340660 MTMR14Q8NCE2 650 aa14.96□□□□□ -0.01
ATXN3-201ENST00000340660 PCDHAC2Q9Y5I4 1007 aa14.96□□□□□ -0.01
ATXN3-201ENST00000340660 SPTBN4Q9H254 2564 aa14.96□□□□□ -0.01
ATXN3-201ENST00000340660 LTBP2Q14767 1821 aa14.96□□□□□ -0.01
ATXN3-201ENST00000340660 MYO3BQ8WXR4 1341 aa14.95□□□□□ -0.02
ATXN3-201ENST00000340660 TLL1O43897 1013 aa14.95□□□□□ -0.02
ATXN3-201ENST00000340660 BCRP11274 1271 aa14.95□□□□□ -0.02
ATXN3-201ENST00000340660 KCNQ1P51787 676 aa14.95□□□□□ -0.02
ATXN3-201ENST00000340660 CDCA8Q53HL2 280 aa14.95□□□□□ -0.02
ATXN3-201ENST00000340660 KIAA0825Q8IV33 1275 aa14.95□□□□□ -0.02
ATXN3-201ENST00000340660 PHOX2BQ99453 314 aa14.95□□□□□ -0.02
ATXN3-201ENST00000340660 ANKIB1Q9P2G1 1089 aa14.95□□□□□ -0.02
ATXN3-201ENST00000340660 AOX1Q06278 1338 aa14.94□□□□□ -0.02
ATXN3-201ENST00000340660 CLRN2A0PK11 232 aa14.94□□□□□ -0.02
ATXN3-201ENST00000340660 SPDYE5A6NIY4 337 aa14.94□□□□□ -0.02
ATXN3-201ENST00000340660 TFF2Q03403 129 aa14.94□□□□□ -0.02
ATXN3-201ENST00000340660 NLRP10Q86W26 655 aa14.94□□□□□ -0.02
ATXN3-201ENST00000340660 NLRP7Q8WX94 980 aa14.94□□□□□ -0.02
ATXN3-201ENST00000340660 COL26A1Q96A83 441 aa14.94□□□□□ -0.02
ATXN3-201ENST00000340660 CXXC1Q9P0U4 656 aaPredicted RBP14.94□□□□□ -0.02
ATXN3-201ENST00000340660 CHD9Q3L8U1 2897 aa14.94□□□□□ -0.02
ATXN3-201ENST00000340660 SH3TC1Q8TE82 1336 aa14.93□□□□□ -0.02
ATXN3-201ENST00000340660 PRR33A8MZF0 331 aa14.93□□□□□ -0.02
ATXN3-201ENST00000340660 IRF6O14896 467 aa14.93□□□□□ -0.02
ATXN3-201ENST00000340660 MMP14P50281 582 aa14.93□□□□□ -0.02
ATXN3-201ENST00000340660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.93□□□□□ -0.02
ATXN3-201ENST00000340660 ZNF576Q9H609 170 aa14.93□□□□□ -0.02
ATXN3-201ENST00000340660 DAXXQ9UER7 740 aaPredicted RBP14.93□□□□□ -0.02
ATXN3-201ENST00000340660 TRMT112Q9UI30 125 aaKnown RBP14.93□□□□□ -0.02
ATXN3-201ENST00000340660 PDHXO00330 501 aa14.92□□□□□ -0.02
ATXN3-201ENST00000340660 GGCXP38435 758 aa14.92□□□□□ -0.02
ATXN3-201ENST00000340660 RPS8P62241 208 aaKnown RBP14.92□□□□□ -0.02
ATXN3-201ENST00000340660 SNAPC2Q13487 334 aa14.92□□□□□ -0.02
ATXN3-201ENST00000340660 RASA3Q14644 834 aa14.92□□□□□ -0.02
ATXN3-201ENST00000340660 SF3B3Q15393 1217 aaKnown RBP14.92□□□□□ -0.02
ATXN3-201ENST00000340660 STRIP1Q5VSL9 837 aa14.92□□□□□ -0.02
ATXN3-201ENST00000340660 GAS2L2Q8NHY3 880 aa14.92□□□□□ -0.02
ATXN3-201ENST00000340660 ZNF428Q96B54 188 aa14.92□□□□□ -0.02
ATXN3-201ENST00000340660 GAS2L1Q99501 681 aaPredicted RBP14.92□□□□□ -0.02
ATXN3-201ENST00000340660 TMUB1Q9BVT8 246 aa14.92□□□□□ -0.02
ATXN3-201ENST00000340660 V9GY48 417 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms