RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 NBPF3Q9H094 633 aa18.51■□□□□ 0.55
SCARB1-202ENST00000339570 PIH1D3Q9NQM4 214 aaKnown RBP18.51■□□□□ 0.55
SCARB1-202ENST00000339570 VSTM4Q8IW00 320 aa18.5■□□□□ 0.55
SCARB1-202ENST00000339570 TIGD1Q96MW7 591 aa18.5■□□□□ 0.55
SCARB1-202ENST00000339570 HINFPQ9BQA5 517 aa18.5■□□□□ 0.55
SCARB1-202ENST00000339570 SLC12A7Q9Y666 1083 aa18.5■□□□□ 0.55
SCARB1-202ENST00000339570 PARP3Q9Y6F1 533 aa18.5■□□□□ 0.55
SCARB1-202ENST00000339570 CHD2O14647 1828 aaKnown RBP18.5■□□□□ 0.55
SCARB1-202ENST00000339570 FAM205CA6NFA0 338 aa18.5■□□□□ 0.55
SCARB1-202ENST00000339570 CCDC93Q567U6 631 aa18.5■□□□□ 0.55
SCARB1-202ENST00000339570 KRBA2Q6ZNG9 492 aa18.5■□□□□ 0.55
SCARB1-202ENST00000339570 ARMT1Q9H993 441 aa18.5■□□□□ 0.55
SCARB1-202ENST00000339570 TEX33O43247 280 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 PHKA1P46020 1223 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 GREM2Q9H772 168 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 SMIM22K7EJ46 135 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 RHOXF2BP0C7M4 288 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 DIS3L2Q8IYB7 885 aaKnown RBP18.49■□□□□ 0.55
SCARB1-202ENST00000339570 KLHL34Q8N239 644 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 RHOXF2Q9BQY4 288 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 SEC31BQ9NQW1 1179 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 PCDHB6Q9Y5E3 794 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 GPIHBP1Q8IV16 184 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 OXER1Q8TDS5 423 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 SUGCTQ9HAC7 445 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 MAPK8IP1Q9UQF2 711 aa18.49■□□□□ 0.55
SCARB1-202ENST00000339570 BAZ2BQ9UIF8 2168 aaKnown RBP18.49■□□□□ 0.55
SCARB1-202ENST00000339570 ZSCAN12O43309 604 aa18.48■□□□□ 0.55
SCARB1-202ENST00000339570 TADA3O75528 432 aa18.48■□□□□ 0.55
SCARB1-202ENST00000339570 CCT6AP40227 531 aaKnown RBP18.48■□□□□ 0.55
SCARB1-202ENST00000339570 SMARCE1Q969G3 411 aa18.48■□□□□ 0.55
SCARB1-202ENST00000339570 CABP5Q9NP86 173 aa18.48■□□□□ 0.55
SCARB1-202ENST00000339570 PRDM1O75626 825 aa18.48■□□□□ 0.55
SCARB1-202ENST00000339570 LMAN1P49257 510 aa18.48■□□□□ 0.55
SCARB1-202ENST00000339570 IRX5P78411 483 aaPredicted RBP18.48■□□□□ 0.55
SCARB1-202ENST00000339570 SSRP1Q08945 709 aaKnown RBP18.48■□□□□ 0.55
SCARB1-202ENST00000339570 EEF2KMTQ96G04 330 aa18.48■□□□□ 0.55
SCARB1-202ENST00000339570 NAPBQ9H115 298 aa18.48■□□□□ 0.55
SCARB1-202ENST00000339570 MAN1B1Q9UKM7 699 aa18.48■□□□□ 0.55
SCARB1-202ENST00000339570 MINDY4BA8MYZ0 360 aa18.48■□□□□ 0.55
SCARB1-202ENST00000339570 ITGA6P23229 1130 aa18.48■□□□□ 0.55
SCARB1-202ENST00000339570 LRRFIP1Q32MZ4 808 aaKnown RBP18.48■□□□□ 0.55
SCARB1-202ENST00000339570 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.48■□□□□ 0.55
SCARB1-202ENST00000339570 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.48■□□□□ 0.551e-8■■■■□ 21.3
SCARB1-202ENST00000339570 MRPL44Q9H9J2 332 aaKnown RBP18.48■□□□□ 0.55
SCARB1-202ENST00000339570 LAMA4Q16363 1823 aa18.47■□□□□ 0.55
SCARB1-202ENST00000339570 PARD6BQ9BYG5 372 aa18.47■□□□□ 0.55
SCARB1-202ENST00000339570 MTMR7Q9Y216 660 aa18.47■□□□□ 0.55
SCARB1-202ENST00000339570 UBN2Q6ZU65 1347 aa18.47■□□□□ 0.55
SCARB1-202ENST00000339570 POSTNQ15063 836 aa18.47■□□□□ 0.55
SCARB1-202ENST00000339570 PTPAQ15257 358 aa18.47■□□□□ 0.55
SCARB1-202ENST00000339570 MAGEB6Q8N7X4 407 aa18.47■□□□□ 0.55
SCARB1-202ENST00000339570 ZSWIM5Q9P217 1185 aa18.47■□□□□ 0.55
SCARB1-202ENST00000339570 AKAP2Q9Y2D5 859 aa18.47■□□□□ 0.55
SCARB1-202ENST00000339570 ZMYM6O95789 1325 aa18.46■□□□□ 0.55
SCARB1-202ENST00000339570 MBD4O95243 580 aa18.46■□□□□ 0.55
SCARB1-202ENST00000339570 TDO2P48775 406 aa18.46■□□□□ 0.55
SCARB1-202ENST00000339570 SAFBQ15424 915 aaKnown RBP eCLIP18.46■□□□□ 0.552e-6■■□□□ 11.8
SCARB1-202ENST00000339570 KRI1Q8N9T8 703 aaKnown RBP18.46■□□□□ 0.55
SCARB1-202ENST00000339570 SMC1AQ14683 1233 aaKnown RBP18.46■□□□□ 0.55
SCARB1-202ENST00000339570 CCDC191Q8NCU4 936 aa18.46■□□□□ 0.55
SCARB1-202ENST00000339570 SH2B2O14492 632 aaPredicted RBP18.46■□□□□ 0.55
SCARB1-202ENST00000339570 IKBKBO14920 756 aa18.46■□□□□ 0.55
SCARB1-202ENST00000339570 CDC25AP30304 524 aa18.46■□□□□ 0.55
SCARB1-202ENST00000339570 DNAJC10Q8IXB1 793 aa18.46■□□□□ 0.55
SCARB1-202ENST00000339570 ATF3P18847 181 aa18.45■□□□□ 0.54
SCARB1-202ENST00000339570 HLFQ16534 295 aa18.45■□□□□ 0.54
SCARB1-202ENST00000339570 GDAP1L1Q96MZ0 367 aa18.45■□□□□ 0.54
SCARB1-202ENST00000339570 C5P01031 1676 aa18.45■□□□□ 0.54
SCARB1-202ENST00000339570 ABL1P00519 1130 aa18.45■□□□□ 0.54
SCARB1-202ENST00000339570 ZNF569Q5MCW4 686 aa18.45■□□□□ 0.54
SCARB1-202ENST00000339570 EPSTI1Q96J88 318 aa18.45■□□□□ 0.54
SCARB1-202ENST00000339570 BPIFA3Q9BQP9 254 aa18.45■□□□□ 0.54
SCARB1-202ENST00000339570 PRDM11Q9NQV5 511 aa18.45■□□□□ 0.54
SCARB1-202ENST00000339570 ARHGAP6O43182 974 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 CDKL5O76039 1030 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 KIF4BQ2VIQ3 1234 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 RESP18Q5W5W9 173 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 ARFGAP3Q9NP61 516 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 TBC1D2BQ9UPU7 963 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 ANKRD65E5RJM6 399 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 SPECC1LQ69YQ0 1117 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 TC2NQ8N9U0 490 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 BLZF1Q9H2G9 400 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 C19orf44Q9H6X5 657 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 TUBE1Q9UJT0 475 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 ZFYP08048 801 aaPredicted RBP18.44■□□□□ 0.54
SCARB1-202ENST00000339570 ZCRB1Q8TBF4 217 aaKnown RBP18.44■□□□□ 0.54
SCARB1-202ENST00000339570 MAP3K14Q99558 947 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 VPS54Q9P1Q0 977 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 RGPD5Q99666 1765 aa18.44■□□□□ 0.54
SCARB1-202ENST00000339570 AFDNP55196 1824 aaKnown RBP18.43■□□□□ 0.54
SCARB1-202ENST00000339570 CCP110O43303 1012 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 PDE6AP16499 860 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 CC2D1AQ6P1N0 951 aaPredicted RBP18.43■□□□□ 0.54
SCARB1-202ENST00000339570 PLCD3Q8N3E9 789 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 CDC5LQ99459 802 aaKnown RBP18.43■□□□□ 0.54
SCARB1-202ENST00000339570 CSRNP2Q9H175 543 aa18.43■□□□□ 0.54
SCARB1-202ENST00000339570 TRMT112Q9UI30 125 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms