RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SLC27A2O14975 620 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 CLPPQ16740 277 aaPredicted RBP9.68□□□□□ -0.86
TDP1-201ENST00000335725 ZBTB8BQ8NAP8 495 aaPredicted RBP9.68□□□□□ -0.86
TDP1-201ENST00000335725 CTNNBL1Q8WYA6 563 aaPredicted RBP9.68□□□□□ -0.86
TDP1-201ENST00000335725 DDX12PQ92771 950 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 WDR35Q9P2L0 1181 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 TUBGCP4Q9UGJ1 667 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 BZW2Q9Y6E2 419 aaKnown RBP9.68□□□□□ -0.86
TDP1-201ENST00000335725 CASKIN1Q8WXD9 1431 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 VIMP08670 466 aaKnown RBP9.68□□□□□ -0.86
TDP1-201ENST00000335725 AMPHP49418 695 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 NLRP5P59047 1200 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 TTC22Q5TAA0 569 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 BICDL1Q6ZP65 573 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 HOOK3Q86VS8 718 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 SHANK2Q9UPX8 1470 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 YTHDC2Q9H6S0 1430 aaKnown RBP9.68□□□□□ -0.86
TDP1-201ENST00000335725 CCDC166P0CW27 439 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 IDO1P14902 403 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 NEK2P51955 445 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 SPIRE2Q8WWL2 714 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 ANO10Q9NW15 660 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 UBAP1Q9NZ09 502 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 CHIC2Q9UKJ5 165 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 DMRT2Q9Y5R5 561 aa9.68□□□□□ -0.86
TDP1-201ENST00000335725 CUTAO60888 179 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 PSMC4P43686 418 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 LONRF3Q496Y0 759 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 PPP1R15BQ5SWA1 713 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 NEK9Q8TD19 979 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 NOD2Q9HC29 1040 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 EXOC1Q9NV70 894 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 CIDEBQ9UHD4 219 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 TMED5Q9Y3A6 229 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 ARHGEF12Q9NZN5 1544 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 CLTCL1P53675 1640 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 LRRIQ3A6PVS8 624 aaPredicted RBP9.67□□□□□ -0.86
TDP1-201ENST00000335725 EVI5O60447 810 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 ANP32DO95626 131 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 TROVE2P10155 538 aaKnown RBP eCLIP9.67□□□□□ -0.86
TDP1-201ENST00000335725 HDAC4P56524 1084 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 MAP7D1Q3KQU3 841 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 MSL1Q68DK7 614 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 KCNN1Q92952 543 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 VCX3BQ9H321 246 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 NRDE2Q9H7Z3 1164 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 VCX3AQ9NNX9 186 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 DACT1Q9NYF0 836 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 GNAQP50148 359 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 PIP4K2BP78356 416 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 MRPS35P82673 323 aaKnown RBP9.67□□□□□ -0.86
TDP1-201ENST00000335725 CBX3Q13185 183 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 ACCSLQ4AC99 568 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 GALNT17Q6IS24 598 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 WDR93Q6P2C0 686 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 CCDC73Q6ZRK6 1079 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 STK11IPQ8N1F8 1099 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 KCTD17Q8N5Z5 321 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 HELLSQ9NRZ9 838 aa9.67□□□□□ -0.86
TDP1-201ENST00000335725 RABL2AQ9UBK7 228 aaPredicted RBP9.67□□□□□ -0.86
TDP1-201ENST00000335725 POLR3AO14802 1390 aaPredicted RBP9.66□□□□□ -0.86
TDP1-201ENST00000335725 HMGB1P1B2RPK0 211 aaPredicted RBP9.66□□□□□ -0.86
TDP1-201ENST00000335725 PFDN1O60925 122 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 ATP6V1G2O95670 118 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 TRIM27P14373 513 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 ALOX15P16050 662 aaPredicted RBP9.66□□□□□ -0.86
TDP1-201ENST00000335725 SKOR1P84550 965 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 XRCC4Q13426 336 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 PEX5LQ8IYB4 626 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 CNKSR1Q969H4 720 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 PPP2R3CQ969Q6 453 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 RBM33Q96EV2 1170 aaKnown RBP9.66□□□□□ -0.86
TDP1-201ENST00000335725 NUP58Q9BVL2 599 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 OSBPL1AQ9BXW6 950 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 DAAM1Q9Y4D1 1078 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 GRIN2DO15399 1336 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 COL17A1Q9UMD9 1497 aaPredicted RBP9.66□□□□□ -0.86
TDP1-201ENST00000335725 SRRM3A6NNA2 597 aaPredicted RBP9.66□□□□□ -0.86
TDP1-201ENST00000335725 ZNF202O95125 648 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 INHBCP55103 352 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 RIPK1Q13546 671 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 LMNTD2Q8IXW0 634 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 ZMAT2Q96NC0 199 aaKnown RBP9.66□□□□□ -0.86
TDP1-201ENST00000335725 BAIAP2L1Q9UHR4 511 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 EHBP1L1Q8N3D4 1523 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 HOXA10P31260 410 aaPredicted RBP9.66□□□□□ -0.86
TDP1-201ENST00000335725 TMF1P82094 1093 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 SESTD1Q86VW0 696 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 PNKPQ96T60 521 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 NAP1L3Q99457 506 aaPredicted RBP9.66□□□□□ -0.86
TDP1-201ENST00000335725 SH3GL2Q99962 352 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 MAK16Q9BXY0 300 aaKnown RBP9.66□□□□□ -0.86
TDP1-201ENST00000335725 SCAND2PQ9GZW5 306 aaPredicted RBP9.66□□□□□ -0.86
TDP1-201ENST00000335725 IRF2BPLQ9H1B7 796 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 CDC23Q9UJX2 597 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 CROTQ9UKG9 612 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 HPCAL4Q9UM19 191 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 C2CD2Q9Y426 696 aa9.66□□□□□ -0.86
TDP1-201ENST00000335725 MMEP08473 750 aa9.65□□□□□ -0.86
TDP1-201ENST00000335725 GSPT1P15170 499 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms