RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 PARK7Q99497 189 aaKnown RBP30.19■■■□□ 2.42
CDKN3-202ENST00000335183 PICK1Q9NRD5 415 aa30.19■■■□□ 2.42
CDKN3-202ENST00000335183 SRRDQ9UH36 339 aa30.19■■■□□ 2.42
CDKN3-202ENST00000335183 PDS5AQ29RF7 1337 aaKnown RBP30.19■■■□□ 2.42
CDKN3-202ENST00000335183 MKI67P46013 3256 aaKnown RBP30.18■■■□□ 2.42
CDKN3-202ENST00000335183 RFX7Q2KHR2 1363 aa30.18■■■□□ 2.42
CDKN3-202ENST00000335183 PHF20L1A8MW92 1017 aa30.18■■■□□ 2.42
CDKN3-202ENST00000335183 CXCL11O14625 94 aa30.18■■■□□ 2.42
CDKN3-202ENST00000335183 SH3BP5LQ7L8J4 393 aa30.18■■■□□ 2.42
CDKN3-202ENST00000335183 ARHGAP45Q92619 1136 aa30.18■■■□□ 2.42
CDKN3-202ENST00000335183 NEUROD6Q96NK8 337 aa30.18■■■□□ 2.42
CDKN3-202ENST00000335183 ZHX2Q9Y6X8 837 aa30.18■■■□□ 2.42
CDKN3-202ENST00000335183 BRCA2P51587 3418 aa30.17■■■□□ 2.42
CDKN3-202ENST00000335183 OSBPP22059 807 aa30.17■■■□□ 2.42
CDKN3-202ENST00000335183 HOXD10P28358 340 aa30.17■■■□□ 2.42
CDKN3-202ENST00000335183 MVPQ14764 893 aaKnown RBP30.17■■■□□ 2.42
CDKN3-202ENST00000335183 RAET1EQ8TD07 263 aa30.17■■■□□ 2.42
CDKN3-202ENST00000335183 DDX4Q9NQI0 724 aaKnown RBP30.17■■■□□ 2.42
CDKN3-202ENST00000335183 PHIPQ8WWQ0 1821 aa30.17■■■□□ 2.42
CDKN3-202ENST00000335183 DDTLA6NHG4 134 aaPredicted RBP30.16■■■□□ 2.42
CDKN3-202ENST00000335183 CYP2C8P10632 490 aa30.16■■■□□ 2.42
CDKN3-202ENST00000335183 HABP4Q5JVS0 413 aaKnown RBP30.16■■■□□ 2.42
CDKN3-202ENST00000335183 GPAT2Q6NUI2 795 aa30.16■■■□□ 2.42
CDKN3-202ENST00000335183 ERICH6Q7L0X2 663 aa30.16■■■□□ 2.42
CDKN3-202ENST00000335183 FAM163AQ96GL9 167 aaPredicted RBP30.16■■■□□ 2.42
CDKN3-202ENST00000335183 MROH7-TTC4A0A0A0MT08 1334 aa30.16■■■□□ 2.42
CDKN3-202ENST00000335183 SLURP2P0DP57 97 aa30.15■■■□□ 2.42
CDKN3-202ENST00000335183 PTPRAP18433 802 aa30.15■■■□□ 2.42
CDKN3-202ENST00000335183 GADL1Q6ZQY3 521 aa30.15■■■□□ 2.42
CDKN3-202ENST00000335183 MYPNQ86TC9 1320 aa30.15■■■□□ 2.42
CDKN3-202ENST00000335183 MECOMQ03112 1051 aa30.14■■■□□ 2.42
CDKN3-202ENST00000335183 MTX1Q13505 466 aa30.14■■■□□ 2.42
CDKN3-202ENST00000335183 MTFR1Q15390 333 aa30.14■■■□□ 2.42
CDKN3-202ENST00000335183 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.14■■■□□ 2.42
CDKN3-202ENST00000335183 A0A0G2JLL6 359 aaPredicted RBP30.13■■■□□ 2.41
CDKN3-202ENST00000335183 GORABQ5T7V8 394 aa30.13■■■□□ 2.41
CDKN3-202ENST00000335183 FASTKD5Q7L8L6 764 aaKnown RBP30.13■■■□□ 2.41
CDKN3-202ENST00000335183 PRRT2Q7Z6L0 340 aaPredicted RBP30.13■■■□□ 2.41
CDKN3-202ENST00000335183 CCER2I3L3R5 266 aa30.12■■■□□ 2.41
CDKN3-202ENST00000335183 BCRP11274 1271 aa30.12■■■□□ 2.41
CDKN3-202ENST00000335183 GRK4P32298 578 aa30.12■■■□□ 2.41
CDKN3-202ENST00000335183 AFG3L2Q9Y4W6 797 aa30.12■■■□□ 2.41
CDKN3-202ENST00000335183 ATAD5Q96QE3 1844 aa30.11■■■□□ 2.41
CDKN3-202ENST00000335183 FCGRTP55899 365 aa30.11■■■□□ 2.41
CDKN3-202ENST00000335183 MAP3K10Q02779 954 aa30.11■■■□□ 2.41
CDKN3-202ENST00000335183 PI16Q6UXB8 463 aa30.11■■■□□ 2.41
CDKN3-202ENST00000335183 FRAT1Q92837 279 aaPredicted RBP30.11■■■□□ 2.41
CDKN3-202ENST00000335183 HMG20BQ9P0W2 317 aa30.11■■■□□ 2.41
CDKN3-202ENST00000335183 TNNQ9UQP3 1299 aa30.11■■■□□ 2.41
CDKN3-202ENST00000335183 GPR75-ASB3A0A0A6YYF3 556 aa30.1■■■□□ 2.41
CDKN3-202ENST00000335183 IPO8O15397 1037 aaKnown RBP30.1■■■□□ 2.41
CDKN3-202ENST00000335183 CTNND1O60716 968 aaKnown RBP30.1■■■□□ 2.41
CDKN3-202ENST00000335183 TRIM27P14373 513 aa30.1■■■□□ 2.41
CDKN3-202ENST00000335183 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.1■■■□□ 2.41
CDKN3-202ENST00000335183 BIN2Q9UBW5 565 aaPredicted RBP30.1■■■□□ 2.41
CDKN3-202ENST00000335183 GNAI2P04899 355 aa30.09■■■□□ 2.41
CDKN3-202ENST00000335183 RHBDL3P58872 404 aa30.09■■■□□ 2.41
CDKN3-202ENST00000335183 PRKCZQ05513 592 aa30.09■■■□□ 2.41
CDKN3-202ENST00000335183 TBC1D9Q6ZT07 1266 aa30.09■■■□□ 2.41
CDKN3-202ENST00000335183 SPATA5Q8NB90 893 aa30.09■■■□□ 2.41
CDKN3-202ENST00000335183 ZNF384Q8TF68 577 aa30.09■■■□□ 2.41
CDKN3-202ENST00000335183 TRIM75PA6NK02 468 aa30.08■■■□□ 2.41
CDKN3-202ENST00000335183 G3BP1Q13283 466 aaKnown RBP eCLIP30.08■■■□□ 2.41
CDKN3-202ENST00000335183 CCDC84Q86UT8 332 aaPredicted RBP30.08■■■□□ 2.41
CDKN3-202ENST00000335183 CLUAP1Q96AJ1 413 aa30.08■■■□□ 2.41
CDKN3-202ENST00000335183 RAI14Q9P0K7 980 aa30.08■■■□□ 2.41
CDKN3-202ENST00000335183 FAM196BA6NMK8 535 aa30.07■■■□□ 2.4
CDKN3-202ENST00000335183 BCAR3O75815 825 aa30.07■■■□□ 2.4
CDKN3-202ENST00000335183 LDHCP07864 332 aa30.07■■■□□ 2.4
CDKN3-202ENST00000335183 GSTO1P78417 241 aa30.07■■■□□ 2.4
CDKN3-202ENST00000335183 ATF7IPQ6VMQ6 1270 aa30.07■■■□□ 2.4
CDKN3-202ENST00000335183 SHISA4Q96DD7 197 aa30.07■■■□□ 2.4
CDKN3-202ENST00000335183 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.07■■■□□ 2.4
CDKN3-202ENST00000335183 PNMA6EA0A0J9YXQ4 647 aa30.06■■■□□ 2.4
CDKN3-202ENST00000335183 NSUN4Q96CB9 384 aaKnown RBP30.06■■■□□ 2.4
CDKN3-202ENST00000335183 GABRQQ9UN88 632 aa30.06■■■□□ 2.4
CDKN3-202ENST00000335183 SLC45A1Q9Y2W3 748 aa30.06■■■□□ 2.4
CDKN3-202ENST00000335183 CCL5P13501 91 aa30.05■■■□□ 2.4
CDKN3-202ENST00000335183 ARID4AP29374 1257 aaPredicted RBP30.05■■■□□ 2.4
CDKN3-202ENST00000335183 UBXN2AP68543 259 aa30.05■■■□□ 2.4
CDKN3-202ENST00000335183 SMCR8Q8TEV9 937 aaPredicted RBP30.05■■■□□ 2.4
CDKN3-202ENST00000335183 NKX2-3Q8TAU0 364 aa30.04■■■□□ 2.4
CDKN3-202ENST00000335183 RNF208Q9H0X6 261 aa30.04■■■□□ 2.4
CDKN3-202ENST00000335183 TBC1D12O60347 775 aa30.03■■■□□ 2.4
CDKN3-202ENST00000335183 NPM3O75607 178 aaKnown RBP30.03■■■□□ 2.4
CDKN3-202ENST00000335183 MCAMP43121 646 aa30.03■■■□□ 2.4
CDKN3-202ENST00000335183 COLQQ9Y215 455 aaPredicted RBP30.03■■■□□ 2.4
CDKN3-202ENST00000335183 DOCK3Q8IZD9 2030 aa30.03■■■□□ 2.4
CDKN3-202ENST00000335183 SLAIN1Q8ND83 568 aa30.02■■■□□ 2.4
CDKN3-202ENST00000335183 OSBPL5Q9H0X9 879 aaPredicted RBP30.02■■■□□ 2.4
CDKN3-202ENST00000335183 LRP2BPQ9P2M1 347 aa30.02■■■□□ 2.4
CDKN3-202ENST00000335183 AGTPBP1Q9UPW5 1226 aa30.02■■■□□ 2.4
CDKN3-202ENST00000335183 MAST2Q6P0Q8 1798 aa30.02■■■□□ 2.4
CDKN3-202ENST00000335183 LOC285556D6RIA3 1793 aa30.01■■■□□ 2.39
CDKN3-202ENST00000335183 H0YGN5 161 aa30.01■■■□□ 2.39
CDKN3-202ENST00000335183 TNPO2O14787 897 aaKnown RBP30.01■■■□□ 2.39
CDKN3-202ENST00000335183 MAP4K4O95819 1239 aaPredicted RBP30.01■■■□□ 2.39
CDKN3-202ENST00000335183 GJB1P08034 283 aa30.01■■■□□ 2.39
CDKN3-202ENST00000335183 UQCRFS1P1P0C7P4 283 aa30.01■■■□□ 2.39
CDKN3-202ENST00000335183 TEX11Q8IYF3 940 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms