RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TSGA10IPQ3SY00 556 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 NOL9Q5SY16 702 aaKnown RBP6.13□□□□□ -1.43
LRIT3-201ENST00000327908 RALYLQ86SE5 291 aaKnown RBP6.13□□□□□ -1.43
LRIT3-201ENST00000327908 FAM177A1Q8N128 213 aaPredicted RBP6.13□□□□□ -1.43
LRIT3-201ENST00000327908 C2orf69Q8N8R5 385 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 TM6SF1Q9BZW5 370 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 FOCADQ5VW36 1801 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 APPP05067 770 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 PABPC4Q13310 644 aaKnown RBP eCLIP6.13□□□□□ -1.43
LRIT3-201ENST00000327908 SCARF1Q14162 830 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 CDC42EP5Q6NZY7 148 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 METTL16Q86W50 562 aaKnown RBP6.13□□□□□ -1.43
LRIT3-201ENST00000327908 CERS5Q8N5B7 392 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 RIOK1Q9BRS2 568 aaKnown RBP6.13□□□□□ -1.43
LRIT3-201ENST00000327908 ZCCHC17Q9NP64 241 aaKnown RBP6.13□□□□□ -1.43
LRIT3-201ENST00000327908 WWC3Q9ULE0 1092 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 CLEC11AQ9Y240 323 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 ERICH2A1L162 156 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 ZNF213O14771 459 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 TOMM70O94826 608 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 FDX1P10109 184 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 GSPT1P15170 499 aaKnown RBP6.13□□□□□ -1.43
LRIT3-201ENST00000327908 APOBEC3HQ6NTF7 200 aaKnown RBP6.13□□□□□ -1.43
LRIT3-201ENST00000327908 OLFM4Q6UX06 510 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 ESR2Q92731 530 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 GPR101Q96P66 508 aaPredicted RBP6.13□□□□□ -1.43
LRIT3-201ENST00000327908 PLIN4Q96Q06 1357 aa6.13□□□□□ -1.43
LRIT3-201ENST00000327908 ADAMTSL1Q8N6G6 1762 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 DDNO94850 711 aaPredicted RBP6.12□□□□□ -1.43
LRIT3-201ENST00000327908 USP14P54578 494 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 MAP3K11Q16584 847 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 IL17RAQ96F46 866 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 IQSEC3Q9UPP2 1182 aaPredicted RBP6.12□□□□□ -1.43
LRIT3-201ENST00000327908 CSADQ9Y600 493 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 LAMA4Q16363 1823 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 WNT10BO00744 389 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 CALM1P0DP23 149 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 CALM2P0DP24 149 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 CALM3P0DP25 149 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 ECE1P42892 770 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 MAP3K10Q02779 954 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 TBC1D9Q6ZT07 1266 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 IQCA1Q86XH1 822 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 ZNF444Q8N0Y2 327 aaPredicted RBP6.12□□□□□ -1.43
LRIT3-201ENST00000327908 STAG1Q8WVM7 1258 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 TMEM87BQ96K49 555 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 RBM27Q9P2N5 1060 aaKnown RBP6.12□□□□□ -1.43
LRIT3-201ENST00000327908 FLT1P17948 1338 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 CTNND1O60716 968 aaKnown RBP6.12□□□□□ -1.43
LRIT3-201ENST00000327908 COPB2P35606 906 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 RHBDL3P58872 404 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 KRT26Q7Z3Y9 468 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 ZSCAN29Q8IWY8 852 aaPredicted RBP6.12□□□□□ -1.43
LRIT3-201ENST00000327908 OTUD7AQ8TE49 926 aaPredicted RBP6.12□□□□□ -1.43
LRIT3-201ENST00000327908 TTC14Q96N46 770 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 VEZTQ9HBM0 779 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 ARHGEF10LQ9HCE6 1279 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 ANO2Q9NQ90 1003 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 PICK1Q9NRD5 415 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 TCP11L1Q9NUJ3 509 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 AATFQ9NY61 560 aaKnown RBP eCLIP6.12□□□□□ -1.43
LRIT3-201ENST00000327908 SERPINB13Q9UIV8 391 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 KIF3AQ9Y496 699 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 SCN9AQ15858 1988 aa6.12□□□□□ -1.43
LRIT3-201ENST00000327908 COL4A5P29400 1685 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 ASNSP08243 561 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 GNAQP50148 359 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 CWC27Q6UX04 472 aaKnown RBP6.11□□□□□ -1.43
LRIT3-201ENST00000327908 SYNE3Q6ZMZ3 975 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 MFSD6Q6ZSS7 791 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 TMEM179Q6ZVK1 233 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 IFNL3Q8IZI9 196 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 NCOA7Q8NI08 942 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 MAP4K1Q92918 833 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 KCNB2Q92953 911 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 DCP1AQ9NPI6 582 aaPredicted RBP6.11□□□□□ -1.43
LRIT3-201ENST00000327908 GGA3Q9NZ52 723 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 F8W031 263 aaPredicted RBP6.11□□□□□ -1.43
LRIT3-201ENST00000327908 INHBEP58166 350 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 RABEP1Q15276 862 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 RBM26Q5T8P6 1007 aaKnown RBP6.11□□□□□ -1.43
LRIT3-201ENST00000327908 C12orf60Q5U649 245 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 CPLX2Q6PUV4 134 aaKnown RBP6.11□□□□□ -1.43
LRIT3-201ENST00000327908 C16orf86Q6ZW13 317 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 RGS22Q8NE09 1264 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 CCDC102AQ96A19 550 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 MAP3K14Q99558 947 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 LZTS2Q9BRK4 669 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 ALDH8A1Q9H2A2 487 aaPredicted RBP6.11□□□□□ -1.43
LRIT3-201ENST00000327908 MKNK2Q9HBH9 465 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 MCM9Q9NXL9 1143 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 HSPD1P10809 573 aaKnown RBP6.11□□□□□ -1.43
LRIT3-201ENST00000327908 TBC1D10BQ4KMP7 808 aaPredicted RBP6.11□□□□□ -1.43
LRIT3-201ENST00000327908 AKNAD1Q5T1N1 836 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 OTUD7BQ6GQQ9 843 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 ANKRD13AQ8IZ07 590 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 OSBP2Q969R2 916 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 ANTXR1Q9H6X2 564 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 ARMT1Q9H993 441 aa6.11□□□□□ -1.43
LRIT3-201ENST00000327908 DDX60LQ5H9U9 1706 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms