RNA–Protein interactions for RNA: ENST00000324545.8

USP9X-201, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 5 BASIC

Gene USP9X, Length 12,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-201ENST00000324545 MYH8P13535 1937 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 MTRQ99707 1265 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 EFCC1Q9HA90 598 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 RCN2Q14257 317 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 CC2D2BQ6DHV5 1058 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 SLF2Q8IX21 1173 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 CPXCR1Q8N123 301 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 PIP4K2CQ8TBX8 421 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 APOBRQ0VD83 1088 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 CTAGE3PQ8IX95 158 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 AKAP2Q9Y2D5 859 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 ZBTB43O43298 467 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 ANKRD24Q8TF21 1146 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 NDUFB9Q9Y6M9 179 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 JADE1Q6IE81 842 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 HDAC11Q96DB2 347 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 NFKBIL1Q9UBC1 381 aaPredicted RBP8.36□□□□□ -1.07
USP9X-201ENST00000324545 SCYL2Q6P3W7 929 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 CEP128Q6ZU80 1094 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 MCUQ8NE86 351 aa8.36□□□□□ -1.07
USP9X-201ENST00000324545 RSRC1Q96IZ7 334 aaKnown RBP8.36□□□□□ -1.07
USP9X-201ENST00000324545 GPHNQ9NQX3 736 aaPredicted RBP8.36□□□□□ -1.07
USP9X-201ENST00000324545 TRPA1O75762 1119 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 VPS8Q8N3P4 1428 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 SPDYE3A6NKU9 549 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 GOLGA8CPA6NN73 597 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 GOLGA8FQ08AF8 430 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 GOLGA8DPQ0D2H9 430 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 CCDC171Q6TFL3 1326 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 NSD3Q9BZ95 1437 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 PTPN21Q16825 1174 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 RTEL1-TNFRSF6BF6WH68 1400 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 I3L4J1 428 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 WDR44Q5JSH3 913 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 CCDC186Q7Z3E2 898 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 C6orf50Q9HD87 102 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 AGRPO00253 132 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 IGBP1P78318 339 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 TTC3P53804 2025 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 CCDC196A0A1B0GTZ2 297 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 CCDC125Q86Z20 511 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 RDH13Q8NBN7 331 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 ATP2A1O14983 1001 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 STX10O60499 249 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 TNFAIP3P21580 790 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 TMPOP42166 694 aaKnown RBP8.35□□□□□ -1.07
USP9X-201ENST00000324545 TBC1D9Q6ZT07 1266 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 CRNKL1Q9BZJ0 848 aaKnown RBP8.35□□□□□ -1.07
USP9X-201ENST00000324545 MCM9Q9NXL9 1143 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 ASIC3Q9UHC3 531 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 ARHGAP44Q17R89 818 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 HHATQ5VTY9 493 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 FAM76AQ8TAV0 307 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 THOC1Q96FV9 657 aaKnown RBP8.35□□□□□ -1.07
USP9X-201ENST00000324545 VPS37BQ9H9H4 285 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.35□□□□□ -1.07
USP9X-201ENST00000324545 NUDCD3Q8IVD9 361 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 BRF1Q92994 677 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 VPS16Q9H269 839 aa8.35□□□□□ -1.07
USP9X-201ENST00000324545 DAB2P98082 770 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 IFI16Q16666 785 aaKnown RBP8.34□□□□□ -1.07
USP9X-201ENST00000324545 CADPSQ9ULU8 1353 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 MAGEB6P1A0A0J9YX57 407 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 LDHAL6AQ6ZMR3 332 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 CABLES1Q8TDN4 633 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 CCDC42Q96M95 316 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 ST7Q9NRC1 585 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 TOP2AP11388 1531 aaKnown RBP8.34□□□□□ -1.07
USP9X-201ENST00000324545 SERPINB6P35237 376 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.34□□□□□ -1.07
USP9X-201ENST00000324545 STAMQ92783 540 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 FNBP1Q96RU3 617 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 RIPOR2Q9Y4F9 1068 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 TMED1Q13445 227 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 SSH1Q8WYL5 1049 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 NUCKS1Q9H1E3 243 aaKnown RBP8.34□□□□□ -1.07
USP9X-201ENST00000324545 FAM8A1Q9UBU6 413 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 ATP2A2P16615 1042 aaKnown RBP8.34□□□□□ -1.07
USP9X-201ENST00000324545 TRMT10CQ7L0Y3 403 aaKnown RBP8.34□□□□□ -1.07
USP9X-201ENST00000324545 AFAP1Q8N556 730 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 ATP1A2P50993 1020 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 LETM2Q2VYF4 491 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 NR1H4Q96RI1 486 aaPredicted RBP8.34□□□□□ -1.07
USP9X-201ENST00000324545 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 POTEB2H3BUK9 544 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 EBAG9O00559 213 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 MAP7Q14244 749 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 LRRC23Q53EV4 343 aaPredicted RBP8.34□□□□□ -1.07
USP9X-201ENST00000324545 STK10O94804 968 aaKnown RBP8.34□□□□□ -1.07
USP9X-201ENST00000324545 KRT2P35908 639 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 SLC8A3P57103 927 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 CCDC85BQ15834 202 aaPredicted RBP8.34□□□□□ -1.07
USP9X-201ENST00000324545 PPP1R42Q7Z4L9 355 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 NELFCDQ8IXH7 590 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 IFT74Q96LB3 600 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 GBP5Q96PP8 586 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 POLKQ9UBT6 870 aa8.34□□□□□ -1.07
USP9X-201ENST00000324545 OPA1O60313 960 aa8.34□□□□□ -1.08
USP9X-201ENST00000324545 RPSAP08865 295 aaKnown RBP8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms